FFCP PHASE1:Hg19::chr1:154322565..154322569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:154322565..154322569,+|id=chr1:154322565..154322569,+|ontology_enrichment_celltype=CL:0000055!2.68e-12!180;CL:0000791!6.33e-07!18;CL:0000789!6.33e-07!18;CL:0002420!6.33e-07!18;CL:0002419!6.33e-07!18;CL:0000790!6.33e-07!18|ontology_enrichment_celltype_v019=CL:0000791;8.87e-09;18!CL:0000789;8.87e-09;18!CL:0002419;8.87e-09;18!CL:0000135;5.73e-08;3!CL:0000388;5.73e-08;3|ontology_enrichment_celltype_v019_2=CL:0000791,5.59e-09,18;CL:0000789,5.59e-09,18;CL:0002420,5.59e-09,18;CL:0002419,5.59e-09,18;CL:0000790,5.59e-09,18;CL:0000135,5.71e-08,3;CL:0000388,5.71e-08,3;CL:0000197,8.86e-07,6;CL:0000098,8.86e-07,6;CL:0002167,8.86e-07,6|ontology_enrichment_development_v019=CL:0000790;8.87e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0007846;5.73e-08;3!UBERON:0000043;5.73e-08;3!UBERON:0007845;5.73e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.71e-08,3;UBERON:0000043,5.71e-08,3;UBERON:0007845,5.71e-08,3|phase1_expression=1.81678379270557,0.856402095563933,0.986680828671798,2.00146596706261,0.893922188854576,0,0,0.631719873426831,1.30592814099919,0,0,0,0.263766978228454,0.123766352960047,1.65698687863958,0,1.20538905604795,0.730310090387373,2.92759679274304,0,0.408001382488506,0,0.572471974262113,0.273748850145768,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0.485168122375632,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,1.57367816091066,1.96505381374582,1.64481199199607,1.33749196312542,0.651844533267181,3.78758244587787,0,1.00269411196656,4.41908861212256,2.21533894583621,0,7.04502258491213,7.93362020115257,4.27538551969558,2.48715016007264,0.289803085735052,0.741432815810302,1.33770414044857,0,1.58633079776593,0.766440987203842,0.68725489096526,0.759059076058509,0.95569624297229,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0.947109008176067,2.46338399076314,1.00803371612366,1.87208137048455,2.02754165435919,0,0.670700859703636,0.383587685530591,1.44575660953827,1.00267582127178,2.60723734129483,0.795285947051099,0.973269740605272,0.283604451492204,0.665188192387692,0.263504357079378,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0.825354125820202,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,1.49091585508596,1.13967460498122,0.529636723252875,0.286836620748814,1.77334191099179,0.560677600142307,0,1.2333377420858,0,0.404132016209064,0.163461903113459,0,1.15235184896,0,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.859840221182376,0.103325781175765,0,2.22540236350701,0,0,1.0100166837244,0.375355559615893,0,0.438977620880838,2.45190236639216,1.35214253015937,0.113432183160021,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0,0.558350568994769,1.18143432568886,0.68205903612839,0.252433774244115,0.184099797284599,0,0,0.201504196455281,0.508681776931463,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,1.92972281457866,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0.301586917234893,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,1.52203321787679,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0.207328115540772,0.576479813667846,0.50496973370552,0.571481048629521,0,0,0,1.02827492703324,0.901029173531752,2.00078502841405,0,0,0.07333828582095,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,1.4377491329495,0,0,0.868687840005475,1.43833425785268,0.179060963239896,0.448340575974109,0.985153801009636,1.50939302401662,1.41177339907723,0,0,0,0.335032530668698,0,0,0,0,0.858840442033979,0,0.542530047399471,1.66376689224646,1.96271887676878,2.36553622550902,2.10854546986884,0.300946099727719,6.82222512167955,0,0,0,0.434418072340414,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0.496215615637554,0.767309866440312,2.52594084989766,0.896974044789907,1.02341449813341,0.965123526861645,1.48418066444991,0.771048469013278,0.710246901252508,0.246381468041427,0,0.581051892299796,0,0.200506470303285,0.0920809889358963,1.26295892981067,0.728364672026868,1.57349297951309,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:154322565..154322569,+ | |||
|id=chr1:154322565..154322569,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.68e-12!180;CL:0000791!6.33e-07!18;CL:0000789!6.33e-07!18;CL:0002420!6.33e-07!18;CL:0002419!6.33e-07!18;CL:0000790!6.33e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.87e-09;18!CL:0000789;8.87e-09;18!CL:0002419;8.87e-09;18!CL:0000135;5.73e-08;3!CL:0000388;5.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.59e-09,18;CL:0000789,5.59e-09,18;CL:0002420,5.59e-09,18;CL:0002419,5.59e-09,18;CL:0000790,5.59e-09,18;CL:0000135,5.71e-08,3;CL:0000388,5.71e-08,3;CL:0000197,8.86e-07,6;CL:0000098,8.86e-07,6;CL:0002167,8.86e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;8.87e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.73e-08;3!UBERON:0000043;5.73e-08;3!UBERON:0007845;5.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.71e-08,3;UBERON:0000043,5.71e-08,3;UBERON:0007845,5.71e-08,3 | |||
|phase1_expression=1.81678379270557,0.856402095563933,0.986680828671798,2.00146596706261,0.893922188854576,0,0,0.631719873426831,1.30592814099919,0,0,0,0.263766978228454,0.123766352960047,1.65698687863958,0,1.20538905604795,0.730310090387373,2.92759679274304,0,0.408001382488506,0,0.572471974262113,0.273748850145768,0,0,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0.485168122375632,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0,0,1.57367816091066,1.96505381374582,1.64481199199607,1.33749196312542,0.651844533267181,3.78758244587787,0,1.00269411196656,4.41908861212256,2.21533894583621,0,7.04502258491213,7.93362020115257,4.27538551969558,2.48715016007264,0.289803085735052,0.741432815810302,1.33770414044857,0,1.58633079776593,0.766440987203842,0.68725489096526,0.759059076058509,0.95569624297229,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0.947109008176067,2.46338399076314,1.00803371612366,1.87208137048455,2.02754165435919,0,0.670700859703636,0.383587685530591,1.44575660953827,1.00267582127178,2.60723734129483,0.795285947051099,0.973269740605272,0.283604451492204,0.665188192387692,0.263504357079378,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,0,0.860234595106124,0.347140501607594,0,0.838998872419812,0.825354125820202,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,1.49091585508596,1.13967460498122,0.529636723252875,0.286836620748814,1.77334191099179,0.560677600142307,0,1.2333377420858,0,0.404132016209064,0.163461903113459,0,1.15235184896,0,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.859840221182376,0.103325781175765,0,2.22540236350701,0,0,1.0100166837244,0.375355559615893,0,0.438977620880838,2.45190236639216,1.35214253015937,0.113432183160021,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0,0.558350568994769,1.18143432568886,0.68205903612839,0.252433774244115,0.184099797284599,0,0,0.201504196455281,0.508681776931463,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,1.92972281457866,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0.301586917234893,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0.469634776943287,0.144366447761074,0,1.52203321787679,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0.207328115540772,0.576479813667846,0.50496973370552,0.571481048629521,0,0,0,1.02827492703324,0.901029173531752,2.00078502841405,0,0,0.07333828582095,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,1.4377491329495,0,0,0.868687840005475,1.43833425785268,0.179060963239896,0.448340575974109,0.985153801009636,1.50939302401662,1.41177339907723,0,0,0,0.335032530668698,0,0,0,0,0.858840442033979,0,0.542530047399471,1.66376689224646,1.96271887676878,2.36553622550902,2.10854546986884,0.300946099727719,6.82222512167955,0,0,0,0.434418072340414,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0.496215615637554,0.767309866440312,2.52594084989766,0.896974044789907,1.02341449813341,0.965123526861645,1.48418066444991,0.771048469013278,0.710246901252508,0.246381468041427,0,0.581051892299796,0,0.200506470303285,0.0920809889358963,1.26295892981067,0.728364672026868,1.57349297951309,0.451199612907412,0.0770153371044148,0,0,0.422206515571503,0,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0,0,0.671624264166535,0,0,0,0,0,0,0.732555718546747,0.247528499761764,0,0,0,0,0.462145851343933,0.767518373630648,0.137836572484531,0.537101224341368,0.290033387828457,0.426133137080504,0.0890320356467374,0,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0.143124886741991,1.116475108079,0.632758849437452,0.571890581771475,0.767693373934002,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.471249609382746,0.404364963146632,0,1.68503382495592,0.975267478179181,2.43713489631284,0,0.545999645631943,0.848432591722276,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,1.8589409885985,0.563391205064483,0.717056761020258,0.196498082026242,0,0.354761064070598,4.01104507065562,0.658589785919804,0.379473173765715,0,0.48111056362756,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,1.70894156152249,0.476463550915578,0.411362273086194,0.648473311192717,0,0.79312517629427,0.747768497892312,0,0.245040215981032,0.371606350251437,0.144269212976445,0.0711418433484141,0.318852545457645,0.199579371432817,0,1.05836791361941,0.324621940274555,0.280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| |||
|short_description=p@chr1:154322565..154322569,+ | |||
}} |
Revision as of 00:37, 12 September 2013
Short description: | p@chr1:154322565..154322569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:154322565..154322569, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.59e-09 | 18 |
alpha-beta T cell | 5.59e-09 | 18 |
immature T cell | 5.59e-09 | 18 |
mature T cell | 5.59e-09 | 18 |
immature alpha-beta T cell | 5.59e-09 | 18 |
fibrocyte | 5.71e-08 | 3 |
tendon cell | 5.71e-08 | 3 |
receptor cell | 8.86e-07 | 6 |
sensory epithelial cell | 8.86e-07 | 6 |
olfactory epithelial cell | 8.86e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.71e-08 | 3 |
tendon | 5.71e-08 | 3 |
regular connective tissue | 5.71e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.