FFCP PHASE1:Hg19::chr1:236228490..236228507,-: Difference between revisions
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{{FFCP | 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3604435028,5.37101224341368,7.25083469571143,4.85791776271775,2.04773681987496,0,0,0,0,0.929691098594572,12.5924938732256,4.1822236209636,4.92853728281742,4.25844824253617,1.73986598415015,4.633105477598,0.286249773483982,7.44316738719335,4.42931194606216,6.1001662055624,1.02359116524534,2.56763392820352,5.40945521474092,3.92474320099615,3.23770423649967,3.84351841630477,4.47687128913608,3.23491970517306,1.58510321173008,6.7401352998237,4.38870365180631,4.87426979262569,4.22600587027022,8.05349477307116,4.66637925447252,3.39024349860728,3.85955740482287,0.66343897524122,0.876901770507525,1.73632660280006,2.62357900818653,3.24656603140326,1.8589409885985,3.94373843545138,3.01163839628508,5.89494246078727,1.07001315444375,3.19284957663538,2.74439925886963,4.28083360847872,8.34840982284573,9.09830272636956,0,0,0,3.01260162485693,1.72202149068492,0,3.54744122829341,1.1486170010348,1.01489521846434,0.764637207142375,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,2.24330549367694,0,1.96032172784825,0,0,0,0,0,0,0,0,0,9.81409119842727,0,0,0,0,0,4.68430861459359,0,7.06653757909453,7.60498766834214,4.50492682622153,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0.556543525114529,0,0,1.9924798825107,1.10513566212459,0,1.22722419002586,0,7.15391051622157,0,0,0,2.36744173528641,4.7896618469388,4.44547960578548,0.969332746095218,0.185536196323703,0,0,0,1.44999915086959,0.1137934482855,0,0,1.03423011972439,0,1.38899995946634,0,0.964771509003264,0,0.331737779793674,0,0.219385397153973,0,2.37020365273626,2.46240827212151,0,14.9866537852239,9.69382559625539,4.45454224880233,0.638002319463839,5.67905079091546,1.06606955203727,0,0,0.498635045700469,0,0,0,0,0.317873157960757,0,0,3.1097675715467,1.29833183845255,2.98578579323551,1.50377859655677,3.05515072466813,0,0,0,0.134802265961354,3.21031058919516,0.468528891450678,0,0,0,0.789168805698781,2.41981432097328,0.61214552326098,2.90658266291045,1.65355761355942,1.9700756365477,0,0.330991955875499,0,0,0,0,0.173559738335131,2.15583274311631,0,1.39781334593624,0,0,0,0,1.35784623083787,0,6.32746074185491,1.64450309576101,1.39100228192093,0.696418755514666,0,0,1.70762395791482,0,0,0,2.74551996579143,0,1.86378803348149,0.707082103850386,6.93111450975432,5.02093662299199,2.03996435272644,10.4022212364547,0.600420288709789,0.136905378891993,0,3.43812353135966,0,0.558564802544508,0.458320848023367,0,0.998395002494955,1.71690419254628,2.23171457441873,5.71059516137173,9.7280968556449,8.15471646692177,4.3330750268973,4.78011978610765,5.52709059604316,4.62609163119319,0,0,0.544813624446302,0.321506296930038,0.412618309791701,0.83088067605837,0,0,0.182248669974074,5.36695500158826,0.945668487590378,4.98318587282482,0.316801009558219,0.179287339332845,0.575745591958336,2.85878130549347,1.98627591109629,0.5085370753095,2.17199840701485,0.864221491201268,1.30634944043764,1.19730191562487,0.164185041498678,3.23737241392301,2.71949019648302,4.39656701034247,5.30027555648885,0.129282956361551,0.13223260174269,0.342173675768659,0,0.747511887973863,4.24451623769098,0.414239055347196,2.48083010905975,0,0,0,2.72008901684737,3.2589686222951,2.45076461410769,2.29510841496863,0,0,0,0.1251909307065,0.573409195690071,0.554645257684261,0.807253238237985,0.138348634936231,2.62458856720424,5.45936823149932,0,1.41159491818903,0,0.434763085832475,3.4328604663981,4.90797950679171,2.21922344601045,2.27283606330107,3.77351852628863,2.66943366478961,5.49216164152617,5.44431325547661,6.21748802331122,6.06206114957499,5.73468361789329,3.14862178514523,5.27894053379282,2.90294345488599,8.24109315129784,3.65221543268214,5.7097891418943,1.14241563650639,4.88244879845594,8.00134100491262,4.08160116761456,3.24823631914946,4.37905477568478,3.20022211730523,1.71697852591396,3.03074539889327,5.04739592914604,2.31143796488764,0.643324774124777,1.30497145982606,1.81364740409818,0.926089897295336,0.97894681802587,1.61179956973339,1.54400723580486,0.438568099157414,1.06013487567529,0.578742114812744,2.53413660979609,1.02496607435179,1.38172136692479,0.303859956177382,0.138258436151731,3.11776494143022,3.5873506884608,3.27130788511688,3.27609848846413,0,0,0,7.89518799736642,0,3.40509572140102,4.0503309055405,0,1.24415452006595,0.639471856518258,2.58779547352036,1.10086159299127,0.109209638192014,0,0,0.371807292777007,1.11728983594649,7.95010876633546,0,4.00285374142735,5.99549104274163,3.6749457282384,0.256916900385838,0,0,0.205116364240755,1.00828678488687,0.484100767249525,0.161475645631851,0,0,0,0,0,3.81382095467167,1.3807198521202,9.74689488369746,2.55715116387475,2.42046082444224,0,0,1.80149109261106,0,0.135075169236789,0,0.826747186004736,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0.127762427639595,0,0,0,0.91064876540519,2.48366636455389,2.53514772622714,1.54339208493677,0.339848664884159,0.328863867814245,1.53651993149159,0.222462803784138,1.64835494986079,0.471346769748006,0,9.13158720509496,3.45484145949794,0.47775168788705,1.21510125100316,0.316027223465453,0,0.347716544605159,6.41369091784202,1.24329698497822,2.21934020222135,0,0.430227358820278,1.41998400876678,1.53384128566484,1.69354820076372,0,0.31020638566432,0,0.111855431797792,0,0,0,0.410651227424988,10.4383298820438,6.31424290976881,3.27515248846948,0.795803100645473,2.14056163399623,1.80713731262336,0,2.71733118420012,0.848915739187391,3.49695296806332,2.35158648180761,2.94177986104687,0,0,0,3.8039015482506,4.75795921125887,3.00748537535531,7.79940444480284,2.69841120997308,0.535661815816973,0,0,5.11235471772562,0,0.716697915757256,2.52434499509095,0.203974470572744,1.74540276136151,2.1161073620616,4.83593523616777,1.84870251452567,1.29787968637137,2.01866279736126,0.437062287854782,0,1.01988829741982,2.93939145792117,0.827054095813604,0.250707539292375,1.13668047327359,0,0,0.620597975171371,0.639701945702943,5.23741749220229,0.322944549180031,1.05527014302958,3.81248332774086,0.636471582781649,3.23387502333151,0.217716747896961,2.39563310759697,0.471464371102113,1.57788851863888,3.32660356546013,3.58174381888288,0.213454691755431,1.9307228228694,1.88632924423832,7.03922827210363,3.30051899293739,7.73102738799903,1.99727032255654,0.805095174364105,3.52625341533556|short_description=p4@NID1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7821 | |||
|TSSclassifier=S | |||
|UniProt=P14543 | |||
|association_with_transcript=-9bp_to_NM_002508,uc001hxo.2,uc009xgd.2_5end | |||
|coexpression_cluster_id=C2574 | |||
|description=CAGE_peak_4_at_NID1_5end | |||
|id=chr1:236228490..236228507,- | |||
|ontology_enrichment_celltype=CL:0000055!9.71e-29!180;CL:0000057!6.78e-20!75;CL:0000222!2.07e-18!119;CL:0000115!2.14e-12!35;CL:0000048!2.21e-12!430;CL:0000144!3.27e-12!625;CL:0002371!5.52e-12!591;CL:0002078!8.38e-12!44;CL:0000723!2.36e-11!436;CL:0000183!2.68e-10!59;CL:0002139!3.73e-10!24;CL:0000034!3.76e-10!444;CL:0000213!1.49e-09!57;CL:0000215!1.49e-09!57;CL:0000680!3.25e-09!57;CL:0000056!3.25e-09!57;CL:0000355!3.25e-09!57;CL:0002620!8.48e-09!23;CL:0000187!1.49e-08!54;CL:0000071!1.67e-07!18;CL:0002546!1.67e-07!18;CL:0000393!7.74e-07!60;CL:0000211!7.74e-07!60;CL:0000548!9.76e-07!679;CL:0000004!9.76e-07!679;CL:0000255!9.76e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.40e-11;36!CL:0002139;3.38e-10;24!CL:0002620;8.52e-10;23!CL:0000057;1.69e-09;73!CL:0002078;9.15e-08;45!CL:0000071;2.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.15e-22,76;CL:0000222,4.98e-17,121;CL:0000048,1.21e-15,427;CL:0000723,3.03e-14,433;CL:0000115,5.87e-13,36;CL:0000034,1.68e-12,441;CL:0002078,8.81e-12,45;CL:0002139,2.46e-10,24;CL:0002620,2.67e-09,23;CL:0002320,7.52e-09,361;CL:0000680,7.79e-09,58;CL:0000056,7.79e-09,58;CL:0000355,7.79e-09,58;CL:0000213,8.38e-09,58;CL:0000215,8.38e-09,58;CL:0000219,3.60e-08,386;CL:0000187,3.78e-08,55;CL:0000134,1.04e-07,354;CL:0000071,1.61e-07,18;CL:0002546,1.61e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.92e-17!79;UBERON:0007798!6.92e-17!79;UBERON:0004535!7.93e-16!110;UBERON:0003914!8.31e-16!118;UBERON:0001009!1.21e-15!113;UBERON:0004872!1.80e-15!84;UBERON:0000490!4.04e-14!138;UBERON:0005256!3.63e-13!143;UBERON:0000055!7.75e-13!69;UBERON:0000468!1.65e-12!659;UBERON:0001981!1.46e-10!60;UBERON:0007500!1.46e-10!60;UBERON:0004537!1.46e-10!60;UBERON:0006965!1.46e-10!60;UBERON:0000467!1.91e-10!625;UBERON:0000480!3.32e-10!626;UBERON:0000926!4.43e-10!448;UBERON:0004120!4.43e-10!448;UBERON:0006603!4.43e-10!448;UBERON:0004290!1.21e-09!70;UBERON:0000914!1.57e-09!83;UBERON:0002329!1.57e-09!83;UBERON:0003077!1.57e-09!83;UBERON:0003059!1.57e-09!83;UBERON:0007282!1.57e-09!83;UBERON:0009618!1.57e-09!83;UBERON:0007285!1.57e-09!83;UBERON:0001134!5.96e-09!61;UBERON:0002036!5.96e-09!61;UBERON:0003082!5.96e-09!61;UBERON:0002385!7.31e-09!63;UBERON:0001015!7.31e-09!63;UBERON:0000383!7.31e-09!63;UBERON:0002100!3.12e-08!216;UBERON:0003081!3.73e-08!216;UBERON:0000486!4.18e-08!82;UBERON:0001986!1.67e-07!18;UBERON:0004638!1.67e-07!18;UBERON:0004852!1.67e-07!18;UBERON:0002107!2.76e-07!19;UBERON:0006925!2.76e-07!19;UBERON:0008836!2.76e-07!19;UBERON:0002417!3.84e-07!61;UBERON:0000916!3.84e-07!61;UBERON:0002199!4.49e-07!45;UBERON:0002416!4.49e-07!45;UBERON:0000119!5.29e-07!312;UBERON:0001637!8.96e-07!42;UBERON:0003509!8.96e-07!42;UBERON:0004572!8.96e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.11e-08;19!UBERON:0006925;9.11e-08;19!UBERON:0004638;2.60e-07;18!UBERON:0001986;2.60e-07;18!UBERON:0004852;2.60e-07;18!UBERON:0002049;4.75e-07;75!UBERON:0007798;4.75e-07;75!UBERON:0000055;6.19e-07;65 | |||
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| |||
|short_description=p4@NID1 | |||
}} |
Revision as of 04:25, 12 September 2013
Short description: | p4@NID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NID1_5end |
Coexpression cluster: | C2574_Mesenchymal_Pericytes_Fibroblast_Adipocyte_Nucleus_Meningeal_stomach |
Association with transcript: | -9bp_to_NM_002508, uc001hxo.2, uc009xgd.2_5end |
EntrezGene: | NID1 |
HGNC: | 7821 |
UniProt: | P14543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.15e-22 | 76 |
mesodermal cell | 4.98e-17 | 121 |
multi fate stem cell | 1.21e-15 | 427 |
somatic stem cell | 3.03e-14 | 433 |
endothelial cell | 5.87e-13 | 36 |
stem cell | 1.68e-12 | 441 |
meso-epithelial cell | 8.81e-12 | 45 |
endothelial cell of vascular tree | 2.46e-10 | 24 |
skin fibroblast | 2.67e-09 | 23 |
connective tissue cell | 7.52e-09 | 361 |
muscle precursor cell | 7.79e-09 | 58 |
myoblast | 7.79e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-09 | 58 |
lining cell | 8.38e-09 | 58 |
barrier cell | 8.38e-09 | 58 |
motile cell | 3.60e-08 | 386 |
muscle cell | 3.78e-08 | 55 |
mesenchymal cell | 1.04e-07 | 354 |
blood vessel endothelial cell | 1.61e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-07 | 18 |
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