FFCP PHASE1:Hg19::chr10:52121805..52121816,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C62|description=CAGE_peak_at_chr10:52121805..52121816,-|id=chr10:52121805..52121816,-|ontology_enrichment_celltype=CL:0000167!1.21e-16!1;CL:0000164!1.21e-16!1;CL:0000502!1.21e-16!1;CL:0000172!1.21e-16!1;CL:0000173!1.21e-16!1;CL:0002351!1.21e-16!1;CL:0000819!1.93e-16!1;CL:0000945!1.48e-10!24;CL:0000826!1.48e-10!24;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2;CL:0000838!2.13e-07!52;CL:0000542!2.95e-07!53;CL:0000051!2.95e-07!53|ontology_enrichment_celltype_v019=CL:0000945;3.75e-12;24|ontology_enrichment_celltype_v019_2=CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24|ontology_enrichment_development_v019=UBERON:0001045;4.66e-66;1|ontology_enrichment_disease=DOID:0060058!7.69e-25!10;DOID:4430!1.21e-16!1;DOID:0060073!1.93e-16!1;DOID:8675!1.93e-16!1|ontology_enrichment_disease_v019=DOID:0060058;2.08e-27;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.08e-27,10|ontology_enrichment_uberon=UBERON:0002106!5.47e-21!3;UBERON:0004854!5.47e-21!3;UBERON:0009034!5.47e-21!3;UBERON:0002095!5.47e-21!3;UBERON:0004782!5.47e-21!3;UBERON:0003281!5.47e-21!3;UBERON:0009664!5.47e-21!3;UBERON:0002296!5.47e-21!3;UBERON:0005602!5.47e-21!3;UBERON:0001179!5.47e-21!3;UBERON:0006293!5.47e-21!3;UBERON:0001154!6.47e-17!1;UBERON:0001153!6.47e-17!1;UBERON:0002372!7.57e-17!1;UBERON:0001961!7.57e-17!1;UBERON:0001744!7.57e-17!1;UBERON:0001735!7.57e-17!1;UBERON:0004177!1.47e-09!7;UBERON:0000341!5.94e-09!2;UBERON:0000945!1.78e-08!8;UBERON:0010039!1.78e-08!8;UBERON:0003887!4.90e-07!21|ontology_enrichment_uberon_v019=UBERON:0001154;4.66e-66;1!UBERON:0001153;4.66e-66;1!UBERON:0009854;4.66e-66;1!UBERON:0009856;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.66e-66,1;UBERON:0001153,4.66e-66,1;UBERON:0001045,4.66e-66,1;UBERON:0004907,1.83e-14,5;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67632646499378,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.80822463617505,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:52121805..52121816,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_at_chr10:52121805..52121816,- | |||
|id=chr10:52121805..52121816,- | |||
|ontology_enrichment_celltype=CL:0000167!1.21e-16!1;CL:0000164!1.21e-16!1;CL:0000502!1.21e-16!1;CL:0000172!1.21e-16!1;CL:0000173!1.21e-16!1;CL:0002351!1.21e-16!1;CL:0000819!1.93e-16!1;CL:0000945!1.48e-10!24;CL:0000826!1.48e-10!24;CL:0000785!6.94e-09!2;CL:0000955!6.94e-09!2;CL:0000818!6.94e-09!2;CL:0000954!6.94e-09!2;CL:0000816!6.94e-09!2;CL:0000838!2.13e-07!52;CL:0000542!2.95e-07!53;CL:0000051!2.95e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.75e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.66e-66;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.69e-25!10;DOID:4430!1.21e-16!1;DOID:0060073!1.93e-16!1;DOID:8675!1.93e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.08e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.47e-21!3;UBERON:0004854!5.47e-21!3;UBERON:0009034!5.47e-21!3;UBERON:0002095!5.47e-21!3;UBERON:0004782!5.47e-21!3;UBERON:0003281!5.47e-21!3;UBERON:0009664!5.47e-21!3;UBERON:0002296!5.47e-21!3;UBERON:0005602!5.47e-21!3;UBERON:0001179!5.47e-21!3;UBERON:0006293!5.47e-21!3;UBERON:0001154!6.47e-17!1;UBERON:0001153!6.47e-17!1;UBERON:0002372!7.57e-17!1;UBERON:0001961!7.57e-17!1;UBERON:0001744!7.57e-17!1;UBERON:0001735!7.57e-17!1;UBERON:0004177!1.47e-09!7;UBERON:0000341!5.94e-09!2;UBERON:0000945!1.78e-08!8;UBERON:0010039!1.78e-08!8;UBERON:0003887!4.90e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.66e-66;1!UBERON:0001153;4.66e-66;1!UBERON:0009854;4.66e-66;1!UBERON:0009856;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.66e-66,1;UBERON:0001153,4.66e-66,1;UBERON:0001045,4.66e-66,1;UBERON:0004907,1.83e-14,5;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67632646499378,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.80822463617505,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:52121805..52121816,- | |||
}} |
Revision as of 13:37, 10 September 2013
Short description: | p@chr10:52121805..52121816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:52121805..52121816, - |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.66e-66 | 1 |
caecum | 4.66e-66 | 1 |
midgut | 4.66e-66 | 1 |
lower digestive tract | 1.83e-14 | 5 |
colon | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.08e-27 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.