FFCP PHASE1:Hg19::chr10:89577778..89577785,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84896|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25903|TSSclassifier=W|UniProt=Q8NBU5|association_with_transcript=131bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end|coexpression_cluster_id=C21|description=CAGE_peak_3_at_ATAD1_5end|id=chr10:89577778..89577785,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;8.70e-20;2!CL:0000453;9.34e-18;5!CL:0000511;9.04e-11;1!CL:0002625;9.04e-11;1!CL:0000228;9.04e-11;1!CL:0000216;9.04e-11;1!CL:0002372;9.04e-11;1!CL:0000990;4.05e-10;8!CL:0000451;2.27e-08;10|ontology_enrichment_celltype_v019_2=CL:0000453,6.64e-18,5;CL:0000511,5.57e-11,1;CL:0002625,5.57e-11,1;CL:0000216,5.57e-11,1;CL:0000228,8.22e-11,1;CL:0002372,8.22e-11,1;CL:0000990,3.36e-10,8;CL:0000451,1.95e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;9.04e-11;1!DOID:0060061;9.04e-11;1!DOID:8691;9.04e-11;1|ontology_enrichment_disease_v019_2=DOID:0060060,5.05e-11,1;DOID:0060061,5.05e-11,1;DOID:8691,5.05e-11,1|ontology_enrichment_uberon=UBERON:0001869!5.51e-16!32;UBERON:0001893!1.58e-15!34;UBERON:0001049!1.65e-15!57;UBERON:0005068!1.65e-15!57;UBERON:0006241!1.65e-15!57;UBERON:0007135!1.65e-15!57;UBERON:0002020!2.74e-15!34;UBERON:0003528!2.74e-15!34;UBERON:0002791!9.39e-15!33;UBERON:0002616!1.58e-14!59;UBERON:0001017!1.86e-14!82;UBERON:0005743!2.18e-14!86;UBERON:0002780!3.32e-13!41;UBERON:0001890!3.32e-13!41;UBERON:0006240!3.32e-13!41;UBERON:0001950!3.93e-13!20;UBERON:0002619!9.03e-13!22;UBERON:0000955!9.63e-13!69;UBERON:0006238!9.63e-13!69;UBERON:0003080!1.20e-12!42;UBERON:0000073!1.27e-12!94;UBERON:0001016!1.27e-12!94;UBERON:0000956!1.08e-11!25;UBERON:0000203!1.08e-11!25;UBERON:0007023!8.60e-11!115;UBERON:0003075!7.15e-10!86;UBERON:0007284!7.15e-10!86;UBERON:0002346!7.76e-09!90;UBERON:0003056!6.64e-08!61;UBERON:0001737!8.21e-07!9|ontology_enrichment_uberon_v019=UBERON:0001882;9.04e-11;1!UBERON:0001136;9.04e-11;1!UBERON:0001343;9.04e-11;1!UBERON:0004910;9.04e-11;1!UBERON:0004813;9.04e-11;1!UBERON:0005403;9.04e-11;1!UBERON:0001869;1.05e-10;32!UBERON:0002791;4.63e-10;32!UBERON:0002331;1.72e-09;10!UBERON:0001893;1.34e-08;34!UBERON:0003528;1.51e-08;34!UBERON:0002020;1.51e-08;34!UBERON:0002021;1.79e-08;5!UBERON:0001017;9.01e-08;75!UBERON:0001950;1.61e-07;20!UBERON:0002780;2.28e-07;41!UBERON:0001890;2.28e-07;41!UBERON:0001016;6.07e-07;83!UBERON:0002619;7.08e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.06e-12,81;UBERON:0001136,5.57e-11,1;UBERON:0001343,5.57e-11,1;UBERON:0004910,5.57e-11,1;UBERON:0005154,5.57e-11,1;UBERON:0005295,5.57e-11,1;UBERON:0004813,5.57e-11,1;UBERON:0005297,5.57e-11,1;UBERON:0005294,5.57e-11,1;UBERON:0010141,5.57e-11,1;UBERON:0005891,5.57e-11,1;UBERON:0001016,1.11e-10,89;UBERON:0001882,1.33e-10,1;UBERON:0005403,1.33e-10,1;UBERON:0000073,3.40e-10,53;UBERON:0002616,3.40e-10,53;UBERON:0002791,6.53e-10,32;UBERON:0001869,6.53e-10,32;UBERON:0000955,1.05e-09,68;UBERON:0006238,1.05e-09,68;UBERON:0001049,1.32e-09,56;UBERON:0005068,1.32e-09,56;UBERON:0006241,1.32e-09,56;UBERON:0007135,1.32e-09,56;UBERON:0002331,1.73e-09,10;UBERON:0000358,1.73e-09,10;UBERON:0000307,1.73e-09,10;UBERON:0000091,1.73e-09,10;UBERON:0000087,1.73e-09,10;UBERON:0007010,1.73e-09,10;UBERON:0007806,1.73e-09,10;UBERON:0008780,1.73e-09,10;UBERON:0005728,1.73e-09,10;UBERON:0003528,2.55e-09,34;UBERON:0002020,2.55e-09,34;UBERON:0001893,2.55e-09,34;UBERON:0002021,2.16e-08,5;UBERON:0002780,1.08e-07,41;UBERON:0001890,1.08e-07,41;UBERON:0003080,1.08e-07,41;UBERON:0006240,1.08e-07,41;UBERON:0001950,1.73e-07,20;UBERON:0002619,7.54e-07,22|phase1_expression=0,0.214100523890983,0.845726424575827,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.458480434487708,0.410502947249729,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0.237270619111097,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84896 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25903 | |||
|TSSclassifier=W | |||
|UniProt=Q8NBU5 | |||
|association_with_transcript=131bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_3_at_ATAD1_5end | |||
|id=chr10:89577778..89577785,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;8.70e-20;2!CL:0000453;9.34e-18;5!CL:0000511;9.04e-11;1!CL:0002625;9.04e-11;1!CL:0000228;9.04e-11;1!CL:0000216;9.04e-11;1!CL:0002372;9.04e-11;1!CL:0000990;4.05e-10;8!CL:0000451;2.27e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.64e-18,5;CL:0000511,5.57e-11,1;CL:0002625,5.57e-11,1;CL:0000216,5.57e-11,1;CL:0000228,8.22e-11,1;CL:0002372,8.22e-11,1;CL:0000990,3.36e-10,8;CL:0000451,1.95e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.04e-11;1!DOID:0060061;9.04e-11;1!DOID:8691;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.05e-11,1;DOID:0060061,5.05e-11,1;DOID:8691,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!5.51e-16!32;UBERON:0001893!1.58e-15!34;UBERON:0001049!1.65e-15!57;UBERON:0005068!1.65e-15!57;UBERON:0006241!1.65e-15!57;UBERON:0007135!1.65e-15!57;UBERON:0002020!2.74e-15!34;UBERON:0003528!2.74e-15!34;UBERON:0002791!9.39e-15!33;UBERON:0002616!1.58e-14!59;UBERON:0001017!1.86e-14!82;UBERON:0005743!2.18e-14!86;UBERON:0002780!3.32e-13!41;UBERON:0001890!3.32e-13!41;UBERON:0006240!3.32e-13!41;UBERON:0001950!3.93e-13!20;UBERON:0002619!9.03e-13!22;UBERON:0000955!9.63e-13!69;UBERON:0006238!9.63e-13!69;UBERON:0003080!1.20e-12!42;UBERON:0000073!1.27e-12!94;UBERON:0001016!1.27e-12!94;UBERON:0000956!1.08e-11!25;UBERON:0000203!1.08e-11!25;UBERON:0007023!8.60e-11!115;UBERON:0003075!7.15e-10!86;UBERON:0007284!7.15e-10!86;UBERON:0002346!7.76e-09!90;UBERON:0003056!6.64e-08!61;UBERON:0001737!8.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;9.04e-11;1!UBERON:0001136;9.04e-11;1!UBERON:0001343;9.04e-11;1!UBERON:0004910;9.04e-11;1!UBERON:0004813;9.04e-11;1!UBERON:0005403;9.04e-11;1!UBERON:0001869;1.05e-10;32!UBERON:0002791;4.63e-10;32!UBERON:0002331;1.72e-09;10!UBERON:0001893;1.34e-08;34!UBERON:0003528;1.51e-08;34!UBERON:0002020;1.51e-08;34!UBERON:0002021;1.79e-08;5!UBERON:0001017;9.01e-08;75!UBERON:0001950;1.61e-07;20!UBERON:0002780;2.28e-07;41!UBERON:0001890;2.28e-07;41!UBERON:0001016;6.07e-07;83!UBERON:0002619;7.08e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.06e-12,81;UBERON:0001136,5.57e-11,1;UBERON:0001343,5.57e-11,1;UBERON:0004910,5.57e-11,1;UBERON:0005154,5.57e-11,1;UBERON:0005295,5.57e-11,1;UBERON:0004813,5.57e-11,1;UBERON:0005297,5.57e-11,1;UBERON:0005294,5.57e-11,1;UBERON:0010141,5.57e-11,1;UBERON:0005891,5.57e-11,1;UBERON:0001016,1.11e-10,89;UBERON:0001882,1.33e-10,1;UBERON:0005403,1.33e-10,1;UBERON:0000073,3.40e-10,53;UBERON:0002616,3.40e-10,53;UBERON:0002791,6.53e-10,32;UBERON:0001869,6.53e-10,32;UBERON:0000955,1.05e-09,68;UBERON:0006238,1.05e-09,68;UBERON:0001049,1.32e-09,56;UBERON:0005068,1.32e-09,56;UBERON:0006241,1.32e-09,56;UBERON:0007135,1.32e-09,56;UBERON:0002331,1.73e-09,10;UBERON:0000358,1.73e-09,10;UBERON:0000307,1.73e-09,10;UBERON:0000091,1.73e-09,10;UBERON:0000087,1.73e-09,10;UBERON:0007010,1.73e-09,10;UBERON:0007806,1.73e-09,10;UBERON:0008780,1.73e-09,10;UBERON:0005728,1.73e-09,10;UBERON:0003528,2.55e-09,34;UBERON:0002020,2.55e-09,34;UBERON:0001893,2.55e-09,34;UBERON:0002021,2.16e-08,5;UBERON:0002780,1.08e-07,41;UBERON:0001890,1.08e-07,41;UBERON:0003080,1.08e-07,41;UBERON:0006240,1.08e-07,41;UBERON:0001950,1.73e-07,20;UBERON:0002619,7.54e-07,22 | |||
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| |||
|short_description=p3@ATAD1 | |||
}} |
Revision as of 14:49, 10 September 2013
Short description: | p3@ATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ATAD1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 131bp_to_ENST00000308448, ENST00000541004, NM_032810, uc001kez.1_5end |
EntrezGene: | ATAD1 |
HGNC: | 25903 |
UniProt: | Q8NBU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.64e-18 | 5 |
androgen binding protein secreting cell | 5.57e-11 | 1 |
seminiferous tubule epithelial cell | 5.57e-11 | 1 |
Sertoli cell | 5.57e-11 | 1 |
multinucleate cell | 8.22e-11 | 1 |
myotube | 8.22e-11 | 1 |
conventional dendritic cell | 3.36e-10 | 8 |
dendritic cell | 1.95e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.05e-11 | 1 |
cutaneous T cell lymphoma | 5.05e-11 | 1 |
mycosis fungoides | 5.05e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.