FFCP PHASE1:Hg19::chr10:89622072..89622081,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:89622072..89622081,-|id=chr10:89622072..89622081,-|ontology_enrichment_celltype=CL:0000860!1.86e-12!45;CL:0002057!1.69e-10!42;CL:0002032!4.04e-10!165;CL:0000837!4.04e-10!165;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000763!4.39e-09!112;CL:0000049!4.39e-09!112;CL:0002087!4.86e-09!119;CL:0000988!7.29e-09!182;CL:0000839!7.73e-09!70;CL:0002194!1.96e-08!63;CL:0000576!1.96e-08!63;CL:0000040!1.96e-08!63;CL:0000559!1.96e-08!63;CL:0002031!2.06e-08!124;CL:0002009!7.62e-08!65;CL:0000557!2.22e-07!71;CL:0000738!2.66e-07!140;CL:0000766!7.64e-07!76|ontology_enrichment_celltype_v019=CL:0000860;5.96e-32;33!CL:0002057;5.96e-32;33!CL:0000473;1.56e-21;39!CL:0000234;1.56e-21;39!CL:0000576;7.17e-15;48!CL:0000766;1.60e-08;69|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-27,42;CL:0002057,2.04e-27,42;CL:0000473,1.38e-23,48;CL:0000234,1.38e-23,48;CL:0002194,3.16e-18,59;CL:0000576,3.16e-18,59;CL:0000040,3.16e-18,59;CL:0000559,3.16e-18,59;CL:0002009,1.55e-17,61;CL:0000839,5.48e-16,66;CL:0000557,1.05e-15,67;CL:0000766,2.06e-14,72;CL:0002087,1.43e-13,115;CL:0002031,7.70e-13,120;CL:0000763,2.20e-11,108;CL:0000049,2.20e-11,108;CL:0002032,6.97e-11,161;CL:0000837,6.97e-11,161;CL:0000738,7.26e-11,136;CL:0000037,3.01e-10,168;CL:0000988,1.66e-09,177|ontology_enrichment_development_v019=CL:0002057;6.43e-20;42|ontology_enrichment_disease=DOID:2531!3.25e-07!51;DOID:0060083!3.25e-07!51|ontology_enrichment_disease_v019=DOID:4960;7.77e-07;1!DOID:0070004;7.77e-07;1|ontology_enrichment_disease_v019_2=DOID:4960,5.69e-07,1;DOID:0070004,5.69e-07,1|ontology_enrichment_uberon=UBERON:0002390!4.94e-09!102;UBERON:0003061!4.94e-09!102;UBERON:0002193!1.53e-08!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-16,98;UBERON:0003061,1.68e-16,98;UBERON:0002371,1.60e-15,76;UBERON:0002193,1.31e-14,108;UBERON:0001474,3.74e-14,82;UBERON:0002405,8.38e-14,93;UBERON:0004765,1.31e-12,90;UBERON:0001434,5.01e-11,100;UBERON:0003081,1.10e-07,203|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.152826811495903,0.410502947249729,0.236132343941038,0,0,0,0.919421224478927,0.30120591877825,0,0,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0,1.85823822537062,0.863077176966451,0.768482119587302,1.18241114944293,2.06847408441971,0.645484683583826,8.12558919566051,0,1.09162460023138,1.34834090667051,0.306083892370903,0.641858054152187,1.27867425159808,0.329851300186716,0.199463657621632,0,1.7412554317715,3.97169657283798,4.9825779919646,1.25624332628372,0,1.08594422352558,2.42159801053347,6.2607198117886,5.37986058649504,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0.414656231081544,0,0.12624243342638,0,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0.845302752556,0,1.04007436911366,0.257207374262142,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0.224170287987055,0.394061520403854,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0.483437798366489,0,0,0.34444334449382,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:89622072..89622081,- | |||
|id=chr10:89622072..89622081,- | |||
|ontology_enrichment_celltype=CL:0000860!1.86e-12!45;CL:0002057!1.69e-10!42;CL:0002032!4.04e-10!165;CL:0000837!4.04e-10!165;CL:0000037!1.11e-09!172;CL:0000566!1.11e-09!172;CL:0000763!4.39e-09!112;CL:0000049!4.39e-09!112;CL:0002087!4.86e-09!119;CL:0000988!7.29e-09!182;CL:0000839!7.73e-09!70;CL:0002194!1.96e-08!63;CL:0000576!1.96e-08!63;CL:0000040!1.96e-08!63;CL:0000559!1.96e-08!63;CL:0002031!2.06e-08!124;CL:0002009!7.62e-08!65;CL:0000557!2.22e-07!71;CL:0000738!2.66e-07!140;CL:0000766!7.64e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-32;33!CL:0002057;5.96e-32;33!CL:0000473;1.56e-21;39!CL:0000234;1.56e-21;39!CL:0000576;7.17e-15;48!CL:0000766;1.60e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-27,42;CL:0002057,2.04e-27,42;CL:0000473,1.38e-23,48;CL:0000234,1.38e-23,48;CL:0002194,3.16e-18,59;CL:0000576,3.16e-18,59;CL:0000040,3.16e-18,59;CL:0000559,3.16e-18,59;CL:0002009,1.55e-17,61;CL:0000839,5.48e-16,66;CL:0000557,1.05e-15,67;CL:0000766,2.06e-14,72;CL:0002087,1.43e-13,115;CL:0002031,7.70e-13,120;CL:0000763,2.20e-11,108;CL:0000049,2.20e-11,108;CL:0002032,6.97e-11,161;CL:0000837,6.97e-11,161;CL:0000738,7.26e-11,136;CL:0000037,3.01e-10,168;CL:0000988,1.66e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.43e-20;42 | |||
|ontology_enrichment_disease=DOID:2531!3.25e-07!51;DOID:0060083!3.25e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:4960;7.77e-07;1!DOID:0070004;7.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.69e-07,1;DOID:0070004,5.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.94e-09!102;UBERON:0003061!4.94e-09!102;UBERON:0002193!1.53e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.68e-16,98;UBERON:0003061,1.68e-16,98;UBERON:0002371,1.60e-15,76;UBERON:0002193,1.31e-14,108;UBERON:0001474,3.74e-14,82;UBERON:0002405,8.38e-14,93;UBERON:0004765,1.31e-12,90;UBERON:0001434,5.01e-11,100;UBERON:0003081,1.10e-07,203 | |||
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| |||
|short_description=p@chr10:89622072..89622081,- | |||
}} |
Revision as of 14:49, 10 September 2013
Short description: | p@chr10:89622072..89622081, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:89622072..89622081, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.04e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-27 | 42 |
defensive cell | 1.38e-23 | 48 |
phagocyte | 1.38e-23 | 48 |
monopoietic cell | 3.16e-18 | 59 |
monocyte | 3.16e-18 | 59 |
monoblast | 3.16e-18 | 59 |
promonocyte | 3.16e-18 | 59 |
macrophage dendritic cell progenitor | 1.55e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.48e-16 | 66 |
granulocyte monocyte progenitor cell | 1.05e-15 | 67 |
myeloid leukocyte | 2.06e-14 | 72 |
nongranular leukocyte | 1.43e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.70e-13 | 120 |
myeloid cell | 2.20e-11 | 108 |
common myeloid progenitor | 2.20e-11 | 108 |
hematopoietic oligopotent progenitor cell | 6.97e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.97e-11 | 161 |
leukocyte | 7.26e-11 | 136 |
hematopoietic stem cell | 3.01e-10 | 168 |
hematopoietic cell | 1.66e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.68e-16 | 98 |
blood island | 1.68e-16 | 98 |
bone marrow | 1.60e-15 | 76 |
hemolymphoid system | 1.31e-14 | 108 |
bone element | 3.74e-14 | 82 |
immune system | 8.38e-14 | 93 |
skeletal element | 1.31e-12 | 90 |
skeletal system | 5.01e-11 | 100 |
lateral plate mesoderm | 1.10e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.69e-07 | 1 |
myeloma | 5.69e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.