FFCP PHASE1:Hg19::chr11:2150786..2150798,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-227bp_to_BC127839_5end|coexpression_cluster_id=C289|description=CAGE_peak_3_at_BC127839_5end|id=chr11:2150786..2150798,+|ontology_enrichment_celltype=CL:0000349!2.32e-10!3;CL:0002577!2.32e-10!3;CL:0002541!4.16e-10!3;CL:0000181!1.07e-08!12;CL:0000417!1.07e-08!12;CL:0000668!1.07e-08!12;CL:0000414!1.07e-08!12;CL:0000412!1.07e-08!12;CL:0000182!1.07e-08!12;CL:0002536!4.13e-07!2;CL:0002575!4.26e-07!2|ontology_enrichment_celltype_v019=CL:0000349;2.93e-55;19!CL:0002537;1.28e-30;5!CL:0002541;1.68e-23;3!CL:0002577;4.60e-23;3!CL:0002536;1.71e-09;2!CL:0002575;1.71e-09;2|ontology_enrichment_celltype_v019_2=CL:0000349,3.15e-55,19;CL:0002537,1.16e-30,5;CL:0002541,1.68e-23,3;CL:0002577,5.15e-23,3;CL:0002575,1.44e-09,2;CL:0002536,1.86e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.92e-30!14;UBERON:0000158!1.92e-30!14;UBERON:0003124!2.05e-21!7;UBERON:0000478!1.58e-19!24;UBERON:0001987!4.94e-13!4;UBERON:0004340!4.94e-13!4;UBERON:0000305!1.61e-11!7;UBERON:0000476!4.16e-10!3;UBERON:0000920!4.16e-10!3;UBERON:0004871!5.03e-10!8;UBERON:0004923!5.56e-10!57;UBERON:0002107!3.66e-09!19;UBERON:0006925!3.66e-09!19;UBERON:0008836!3.66e-09!19;UBERON:0008835!1.02e-07!22;UBERON:0003894!1.02e-07!22;UBERON:0009854!2.53e-07!23|ontology_enrichment_uberon_v019=UBERON:0005631;1.51e-59;10!UBERON:0000158;1.51e-59;10!UBERON:0000478;1.08e-43;24!UBERON:0000305;4.10e-38;7!UBERON:0003124;1.68e-23;3!UBERON:0000920;1.68e-23;3!UBERON:0001987;1.45e-17;4!UBERON:0004923;8.49e-08;55!UBERON:0001723;9.64e-07;3!UBERON:0001033;9.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.00e-75,14;UBERON:0000158,5.00e-75,14;UBERON:0000478,1.15e-43,24;UBERON:0003124,2.10e-38,7;UBERON:0000305,4.11e-38,7;UBERON:0004871,2.04e-33,8;UBERON:0000920,1.68e-23,3;UBERON:0001987,1.57e-17,4;UBERON:0004340,1.57e-17,4;UBERON:0004923,1.31e-15,66;UBERON:0001723,9.12e-07,3;UBERON:0001033,9.12e-07,3;UBERON:0010056,9.12e-07,3|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0.218441372130172,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0.195801157462741,1.71571711905428,0,0,0,0.303127571446259,3.32870879020994,2.11673205330776,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20735660317994,3.8605408508243,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,17.2260626255237,0.0915975934018623,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.39961921916426,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.404421263125109,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2380644314637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-227bp_to_BC127839_5end | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_3_at_BC127839_5end | |||
|id=chr11:2150786..2150798,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.32e-10!3;CL:0002577!2.32e-10!3;CL:0002541!4.16e-10!3;CL:0000181!1.07e-08!12;CL:0000417!1.07e-08!12;CL:0000668!1.07e-08!12;CL:0000414!1.07e-08!12;CL:0000412!1.07e-08!12;CL:0000182!1.07e-08!12;CL:0002536!4.13e-07!2;CL:0002575!4.26e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.93e-55;19!CL:0002537;1.28e-30;5!CL:0002541;1.68e-23;3!CL:0002577;4.60e-23;3!CL:0002536;1.71e-09;2!CL:0002575;1.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.15e-55,19;CL:0002537,1.16e-30,5;CL:0002541,1.68e-23,3;CL:0002577,5.15e-23,3;CL:0002575,1.44e-09,2;CL:0002536,1.86e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.92e-30!14;UBERON:0000158!1.92e-30!14;UBERON:0003124!2.05e-21!7;UBERON:0000478!1.58e-19!24;UBERON:0001987!4.94e-13!4;UBERON:0004340!4.94e-13!4;UBERON:0000305!1.61e-11!7;UBERON:0000476!4.16e-10!3;UBERON:0000920!4.16e-10!3;UBERON:0004871!5.03e-10!8;UBERON:0004923!5.56e-10!57;UBERON:0002107!3.66e-09!19;UBERON:0006925!3.66e-09!19;UBERON:0008836!3.66e-09!19;UBERON:0008835!1.02e-07!22;UBERON:0003894!1.02e-07!22;UBERON:0009854!2.53e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.51e-59;10!UBERON:0000158;1.51e-59;10!UBERON:0000478;1.08e-43;24!UBERON:0000305;4.10e-38;7!UBERON:0003124;1.68e-23;3!UBERON:0000920;1.68e-23;3!UBERON:0001987;1.45e-17;4!UBERON:0004923;8.49e-08;55!UBERON:0001723;9.64e-07;3!UBERON:0001033;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.00e-75,14;UBERON:0000158,5.00e-75,14;UBERON:0000478,1.15e-43,24;UBERON:0003124,2.10e-38,7;UBERON:0000305,4.11e-38,7;UBERON:0004871,2.04e-33,8;UBERON:0000920,1.68e-23,3;UBERON:0001987,1.57e-17,4;UBERON:0004340,1.57e-17,4;UBERON:0004923,1.31e-15,66;UBERON:0001723,9.12e-07,3;UBERON:0001033,9.12e-07,3;UBERON:0010056,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0.218441372130172,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0.195801157462741,1.71571711905428,0,0,0,0.303127571446259,3.32870879020994,2.11673205330776,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20735660317994,3.8605408508243,3.68592842519078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,17.2260626255237,0.0915975934018623,7.46248686426089,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.39961921916426,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.329663433524666,0.404421263125109,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,1.36893320434112,0,0,0.332660356546013,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p3@BC127839 | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p3@BC127839 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BC127839_5end |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | -227bp_to_BC127839_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.15e-55 | 19 |
amnion mesenchymal stem cell | 1.16e-30 | 5 |
chorionic membrane mesenchymal stem cell | 1.68e-23 | 3 |
placental epithelial cell | 5.15e-23 | 3 |
central nervous system pericyte | 1.44e-09 | 2 |
amniotic epithelial cell | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.00e-75 | 14 |
membranous layer | 5.00e-75 | 14 |
extraembryonic structure | 1.15e-43 | 24 |
chorion | 2.10e-38 | 7 |
amnion | 4.11e-38 | 7 |
somatic layer of lateral plate mesoderm | 2.04e-33 | 8 |
egg chorion | 1.68e-23 | 3 |
placenta | 1.57e-17 | 4 |
allantois | 1.57e-17 | 4 |
organ component layer | 1.31e-15 | 66 |
tongue | 9.12e-07 | 3 |
gustatory system | 9.12e-07 | 3 |
future tongue | 9.12e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.