FFCP PHASE1:Hg19::chr11:28779323..28779364,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C91|description=CAGE_peak_at_chr11:28779323..28779364,-|id=chr11:28779323..28779364,-|ontology_enrichment_celltype=CL:0000077!4.58e-28!19;CL:0000222!1.71e-19!119;CL:0000055!6.71e-13!180;CL:0000213!7.63e-13!57;CL:0000215!7.63e-13!57;CL:0000076!4.07e-11!62;CL:0000359!5.26e-11!32;CL:0000192!6.75e-11!42;CL:0000514!6.75e-11!42;CL:0000220!3.74e-10!246;CL:0002321!5.81e-10!248;CL:0000548!3.18e-09!679;CL:0000004!3.18e-09!679;CL:0000255!3.18e-09!679;CL:0000012!4.51e-09!682;CL:0000680!9.21e-09!57;CL:0000056!9.21e-09!57;CL:0000355!9.21e-09!57;CL:0002594!1.21e-08!4;CL:0000144!1.29e-08!625;CL:0000187!2.21e-08!54;CL:0000183!2.82e-07!59;CL:0000003!3.59e-07!722;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60|ontology_enrichment_celltype_v019=CL:0002593;2.59e-12;2!CL:0000077;4.52e-11;19!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4|ontology_enrichment_celltype_v019_2=CL:0002593,3.62e-12,2;CL:0000077,4.84e-11,19;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!1.15e-14!42;UBERON:0003509!1.15e-14!42;UBERON:0004572!1.15e-14!42;UBERON:0002049!4.24e-12!79;UBERON:0007798!4.24e-12!79;UBERON:0001981!7.28e-12!60;UBERON:0007500!7.28e-12!60;UBERON:0004537!7.28e-12!60;UBERON:0006965!7.28e-12!60;UBERON:0000490!6.34e-11!138;UBERON:0007625!6.58e-10!11;UBERON:0000055!1.66e-09!69;UBERON:0004573!2.61e-09!33;UBERON:0004571!2.61e-09!33;UBERON:0001310!1.21e-08!4;UBERON:0004872!2.64e-08!84;UBERON:0000947!3.04e-08!21;UBERON:0010191!3.04e-08!21;UBERON:0004535!4.93e-08!110;UBERON:0001134!7.36e-08!61;UBERON:0002036!7.36e-08!61;UBERON:0003082!7.36e-08!61;UBERON:0003914!1.05e-07!118;UBERON:0001009!1.26e-07!113;UBERON:0002385!1.87e-07!63;UBERON:0001015!1.87e-07!63;UBERON:0000383!1.87e-07!63;UBERON:0000488!2.28e-07!4|ontology_enrichment_uberon_v019=UBERON:0002456;2.59e-12;2!UBERON:0004797;6.50e-07;4!UBERON:0000415;6.50e-07;4!UBERON:0007240;6.50e-07;4!UBERON:0005742;6.50e-07;4!UBERON:0005734;6.50e-07;4!UBERON:0004664;6.50e-07;4!UBERON:0004663;6.50e-07;4!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,6.3556406790345,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0.538168907066586,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.37223371266318,0,0,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0.40101294060657,0,0.68888668898764,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0.811641507850816,0.30982349809975,0.281695602532241,0,0.0982490410131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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr11:28779323..28779364,- | |||
|id=chr11:28779323..28779364,- | |||
|ontology_enrichment_celltype=CL:0000077!4.58e-28!19;CL:0000222!1.71e-19!119;CL:0000055!6.71e-13!180;CL:0000213!7.63e-13!57;CL:0000215!7.63e-13!57;CL:0000076!4.07e-11!62;CL:0000359!5.26e-11!32;CL:0000192!6.75e-11!42;CL:0000514!6.75e-11!42;CL:0000220!3.74e-10!246;CL:0002321!5.81e-10!248;CL:0000548!3.18e-09!679;CL:0000004!3.18e-09!679;CL:0000255!3.18e-09!679;CL:0000012!4.51e-09!682;CL:0000680!9.21e-09!57;CL:0000056!9.21e-09!57;CL:0000355!9.21e-09!57;CL:0002594!1.21e-08!4;CL:0000144!1.29e-08!625;CL:0000187!2.21e-08!54;CL:0000183!2.82e-07!59;CL:0000003!3.59e-07!722;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002593;2.59e-12;2!CL:0000077;4.52e-11;19!CL:1000306;6.50e-07;4!CL:0002547;6.50e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.62e-12,2;CL:0000077,4.84e-11,19;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.15e-14!42;UBERON:0003509!1.15e-14!42;UBERON:0004572!1.15e-14!42;UBERON:0002049!4.24e-12!79;UBERON:0007798!4.24e-12!79;UBERON:0001981!7.28e-12!60;UBERON:0007500!7.28e-12!60;UBERON:0004537!7.28e-12!60;UBERON:0006965!7.28e-12!60;UBERON:0000490!6.34e-11!138;UBERON:0007625!6.58e-10!11;UBERON:0000055!1.66e-09!69;UBERON:0004573!2.61e-09!33;UBERON:0004571!2.61e-09!33;UBERON:0001310!1.21e-08!4;UBERON:0004872!2.64e-08!84;UBERON:0000947!3.04e-08!21;UBERON:0010191!3.04e-08!21;UBERON:0004535!4.93e-08!110;UBERON:0001134!7.36e-08!61;UBERON:0002036!7.36e-08!61;UBERON:0003082!7.36e-08!61;UBERON:0003914!1.05e-07!118;UBERON:0001009!1.26e-07!113;UBERON:0002385!1.87e-07!63;UBERON:0001015!1.87e-07!63;UBERON:0000383!1.87e-07!63;UBERON:0000488!2.28e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.59e-12;2!UBERON:0004797;6.50e-07;4!UBERON:0000415;6.50e-07;4!UBERON:0007240;6.50e-07;4!UBERON:0005742;6.50e-07;4!UBERON:0005734;6.50e-07;4!UBERON:0004664;6.50e-07;4!UBERON:0004663;6.50e-07;4!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.62e-12,2;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0.12663051166458,6.3556406790345,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0.538168907066586,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0.37223371266318,0,0,0,0.184099797284599,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0.40101294060657,0,0.68888668898764,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0.811641507850816,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0.192619830407303,0.428883182749851,0.782982875895635,0.680117776536817,0.231522474323834,1.46842022703881,1.25362188757041,0.308801447160972,0.219284049578707,0.176689145945881,1.3503982678964,0.506827321959218,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:28779323..28779364,- | |||
}} |
Revision as of 17:22, 10 September 2013
Short description: | p@chr11:28779323..28779364, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:28779323..28779364, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.62e-12 | 2 |
mesothelial cell | 4.84e-11 | 19 |
fibroblast of tunica adventitia of artery | 6.50e-07 | 4 |
fibroblast of the aortic adventitia | 6.50e-07 | 4 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.62e-12 | 2 |
artery wall | 6.50e-07 | 4 |
tunica adventitia of artery | 6.50e-07 | 4 |
adventitia | 6.50e-07 | 4 |
tunica adventitia of blood vessel | 6.50e-07 | 4 |
aorta tunica adventitia | 6.50e-07 | 4 |
aorta wall | 6.50e-07 | 4 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.