FFCP PHASE1:Hg19::chr11:92930499..92930551,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=120103|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19660|TSSclassifier=S|UniProt=|association_with_transcript=69bp_to_ENST00000529184_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_SLC36A4_5end|id=chr11:92930499..92930551,-|ontology_enrichment_celltype=CL:0002057!1.45e-76!42;CL:0000860!1.58e-70!45;CL:0000766!1.57e-63!76;CL:0002009!6.77e-59!65;CL:0002194!1.54e-55!63;CL:0000576!1.54e-55!63;CL:0000040!1.54e-55!63;CL:0000559!1.54e-55!63;CL:0000557!3.55e-55!71;CL:0000839!5.45e-51!70;CL:0000738!1.61e-50!140;CL:0000763!1.48e-41!112;CL:0000049!1.48e-41!112;CL:0002087!6.50e-41!119;CL:0000037!6.74e-39!172;CL:0000566!6.74e-39!172;CL:0002031!2.83e-38!124;CL:0000988!5.39e-37!182;CL:0002032!7.80e-34!165;CL:0000837!7.80e-34!165;CL:0002393!1.49e-17!9;CL:0002397!1.49e-17!9;CL:0000134!2.60e-12!358;CL:0000094!7.69e-12!8;CL:0002320!1.03e-11!365;CL:0000081!1.48e-10!11;CL:0000219!3.45e-10!390;CL:0000034!3.08e-09!444;CL:0000723!3.29e-09!436;CL:0000048!4.52e-09!430;CL:0000842!2.55e-07!3|ontology_enrichment_celltype_v019=CL:0000860;2.33e-84;33!CL:0002057;2.33e-84;33!CL:0000473;2.04e-61;39!CL:0000234;2.04e-61;39!CL:0000576;6.55e-59;48!CL:0000766;1.84e-44;69!CL:0002393;9.28e-23;6!CL:0002397;9.28e-23;6!CL:0000763;1.40e-19;100!CL:0002087;1.29e-17;104!CL:0000094;8.26e-16;8!CL:0000738;2.60e-14;136!CL:0000226;2.63e-12;3!CL:0000842;2.63e-12;3!CL:0000081;2.47e-11;11!CL:0000771;1.93e-08;2!CL:0000988;3.05e-08;177!CL:0001014;4.54e-08;2!CL:0001016;4.54e-08;2!CL:0000219;3.28e-07;193|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-111,42;CL:0002057,1.37e-111,42;CL:0000473,6.06e-102,48;CL:0000234,6.06e-102,48;CL:0000766,3.63e-92,72;CL:0002009,2.69e-90,61;CL:0002194,3.18e-84,59;CL:0000576,3.18e-84,59;CL:0000040,3.18e-84,59;CL:0000559,3.18e-84,59;CL:0000557,1.66e-81,67;CL:0000839,1.79e-74,66;CL:0000763,1.97e-64,108;CL:0000049,1.97e-64,108;CL:0000738,1.13e-59,136;CL:0002087,3.14e-49,115;CL:0000037,2.03e-46,168;CL:0002031,5.19e-44,120;CL:0000988,1.51e-43,177;CL:0002032,4.49e-42,161;CL:0000837,4.49e-42,161;CL:0002393,6.93e-20,9;CL:0002397,6.93e-20,9;CL:0000134,1.34e-16,354;CL:0002320,4.50e-16,361;CL:0000094,7.12e-16,8;CL:0000219,4.06e-15,386;CL:0000034,7.38e-13,441;CL:0000723,1.96e-12,433;CL:0000226,2.39e-12,3;CL:0000842,2.39e-12,3;CL:0000048,6.00e-12,427;CL:0000081,2.22e-11,11;CL:0000771,1.79e-08,2;CL:0001014,4.07e-08,2;CL:0001016,4.07e-08,2|ontology_enrichment_development_v019=CL:0002057;1.03e-78;42!CL:0000049;2.65e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.60e-49!80;UBERON:0002390!7.75e-47!102;UBERON:0003061!7.75e-47!102;UBERON:0001474!5.08e-45!86;UBERON:0002193!8.03e-43!112;UBERON:0004765!1.02e-37!101;UBERON:0001434!1.02e-37!101;UBERON:0002405!1.15e-32!115;UBERON:0003081!2.87e-19!216;UBERON:0002204!5.22e-17!167;UBERON:0002384!6.67e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.95e-71,76;UBERON:0001474,4.40e-65,82;UBERON:0002390,1.74e-62,98;UBERON:0003061,1.74e-62,98;UBERON:0004765,1.55e-58,90;UBERON:0002405,2.28e-56,93;UBERON:0002193,7.40e-56,108;UBERON:0001434,8.23e-52,100;UBERON:0002204,2.11e-27,167;UBERON:0003081,2.78e-25,203;UBERON:0002384,2.35e-15,371;UBERON:0000926,7.47e-13,315;UBERON:0004120,7.47e-13,315;UBERON:0006603,7.47e-13,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,4.60595277716655,0.928896739896456,0,0,0,0,0,0.587200878669695,37.1176923716358,15.0408335602606,18.6629348815633,0,0,0,1.01778767145695,1.13362783106643,0.970336244751265,8.59987436551033,5.75635043230556,9.29119112685311,9.20615655430881,5.63553554364021,11.8241114944293,54.1250718756491,41.3110197493649,35.2108865145289,5.64727018627814,4.09359225086769,10.7867272533641,49.8916744564571,34.9812639512942,45.3929359317319,0.659702600373432,0.797854630486527,0,26.9894591924583,12.4824749432051,16.1933784738849,8.54245461872927,3.12889751052121,6.29847649644838,12.1079900526674,18.0456041633907,22.7852918957437,2.74631872205524,7.44115049877652,2.72556239160889,8.08766144254765,5.40636814229423,5.6253955343978,0.855038231223746,1.39241674039363,0.365328307529268,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,3.36305137788922,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,1.43094374583205,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=120103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19660 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=69bp_to_ENST00000529184_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SLC36A4_5end | |||
|id=chr11:92930499..92930551,- | |||
|ontology_enrichment_celltype=CL:0002057!1.45e-76!42;CL:0000860!1.58e-70!45;CL:0000766!1.57e-63!76;CL:0002009!6.77e-59!65;CL:0002194!1.54e-55!63;CL:0000576!1.54e-55!63;CL:0000040!1.54e-55!63;CL:0000559!1.54e-55!63;CL:0000557!3.55e-55!71;CL:0000839!5.45e-51!70;CL:0000738!1.61e-50!140;CL:0000763!1.48e-41!112;CL:0000049!1.48e-41!112;CL:0002087!6.50e-41!119;CL:0000037!6.74e-39!172;CL:0000566!6.74e-39!172;CL:0002031!2.83e-38!124;CL:0000988!5.39e-37!182;CL:0002032!7.80e-34!165;CL:0000837!7.80e-34!165;CL:0002393!1.49e-17!9;CL:0002397!1.49e-17!9;CL:0000134!2.60e-12!358;CL:0000094!7.69e-12!8;CL:0002320!1.03e-11!365;CL:0000081!1.48e-10!11;CL:0000219!3.45e-10!390;CL:0000034!3.08e-09!444;CL:0000723!3.29e-09!436;CL:0000048!4.52e-09!430;CL:0000842!2.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-84;33!CL:0002057;2.33e-84;33!CL:0000473;2.04e-61;39!CL:0000234;2.04e-61;39!CL:0000576;6.55e-59;48!CL:0000766;1.84e-44;69!CL:0002393;9.28e-23;6!CL:0002397;9.28e-23;6!CL:0000763;1.40e-19;100!CL:0002087;1.29e-17;104!CL:0000094;8.26e-16;8!CL:0000738;2.60e-14;136!CL:0000226;2.63e-12;3!CL:0000842;2.63e-12;3!CL:0000081;2.47e-11;11!CL:0000771;1.93e-08;2!CL:0000988;3.05e-08;177!CL:0001014;4.54e-08;2!CL:0001016;4.54e-08;2!CL:0000219;3.28e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-111,42;CL:0002057,1.37e-111,42;CL:0000473,6.06e-102,48;CL:0000234,6.06e-102,48;CL:0000766,3.63e-92,72;CL:0002009,2.69e-90,61;CL:0002194,3.18e-84,59;CL:0000576,3.18e-84,59;CL:0000040,3.18e-84,59;CL:0000559,3.18e-84,59;CL:0000557,1.66e-81,67;CL:0000839,1.79e-74,66;CL:0000763,1.97e-64,108;CL:0000049,1.97e-64,108;CL:0000738,1.13e-59,136;CL:0002087,3.14e-49,115;CL:0000037,2.03e-46,168;CL:0002031,5.19e-44,120;CL:0000988,1.51e-43,177;CL:0002032,4.49e-42,161;CL:0000837,4.49e-42,161;CL:0002393,6.93e-20,9;CL:0002397,6.93e-20,9;CL:0000134,1.34e-16,354;CL:0002320,4.50e-16,361;CL:0000094,7.12e-16,8;CL:0000219,4.06e-15,386;CL:0000034,7.38e-13,441;CL:0000723,1.96e-12,433;CL:0000226,2.39e-12,3;CL:0000842,2.39e-12,3;CL:0000048,6.00e-12,427;CL:0000081,2.22e-11,11;CL:0000771,1.79e-08,2;CL:0001014,4.07e-08,2;CL:0001016,4.07e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-78;42!CL:0000049;2.65e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.60e-49!80;UBERON:0002390!7.75e-47!102;UBERON:0003061!7.75e-47!102;UBERON:0001474!5.08e-45!86;UBERON:0002193!8.03e-43!112;UBERON:0004765!1.02e-37!101;UBERON:0001434!1.02e-37!101;UBERON:0002405!1.15e-32!115;UBERON:0003081!2.87e-19!216;UBERON:0002204!5.22e-17!167;UBERON:0002384!6.67e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.95e-71,76;UBERON:0001474,4.40e-65,82;UBERON:0002390,1.74e-62,98;UBERON:0003061,1.74e-62,98;UBERON:0004765,1.55e-58,90;UBERON:0002405,2.28e-56,93;UBERON:0002193,7.40e-56,108;UBERON:0001434,8.23e-52,100;UBERON:0002204,2.11e-27,167;UBERON:0003081,2.78e-25,203;UBERON:0002384,2.35e-15,371;UBERON:0000926,7.47e-13,315;UBERON:0004120,7.47e-13,315;UBERON:0006603,7.47e-13,315 | |||
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|short_description=p3@SLC36A4 | |||
}} |
Revision as of 20:11, 10 September 2013
Short description: | p3@SLC36A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC36A4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 69bp_to_ENST00000529184_5end |
EntrezGene: | SLC36A4 |
HGNC: | 19660 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.95e-71 | 76 |
bone element | 4.40e-65 | 82 |
hematopoietic system | 1.74e-62 | 98 |
blood island | 1.74e-62 | 98 |
skeletal element | 1.55e-58 | 90 |
immune system | 2.28e-56 | 93 |
hemolymphoid system | 7.40e-56 | 108 |
skeletal system | 8.23e-52 | 100 |
musculoskeletal system | 2.11e-27 | 167 |
lateral plate mesoderm | 2.78e-25 | 203 |
connective tissue | 2.35e-15 | 371 |
mesoderm | 7.47e-13 | 315 |
mesoderm-derived structure | 7.47e-13 | 315 |
presumptive mesoderm | 7.47e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.