FFCP PHASE1:Hg19::chr11:98951729..98951731,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:98951729..98951731,+|id=chr11:98951729..98951731,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000077;5.72e-10;19!CL:0000511;6.21e-09;1!CL:0002625;6.21e-09;1!CL:0000216;6.21e-09;1|ontology_enrichment_celltype_v019_2=CL:0000077,6.30e-10,19;CL:0000511,5.31e-09,1;CL:0002625,5.31e-09,1;CL:0000216,5.31e-09,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!1.33e-41!22;UBERON:0001049!3.96e-40!57;UBERON:0005068!3.96e-40!57;UBERON:0006241!3.96e-40!57;UBERON:0007135!3.96e-40!57;UBERON:0002780!5.59e-40!41;UBERON:0001890!5.59e-40!41;UBERON:0006240!5.59e-40!41;UBERON:0002020!2.08e-39!34;UBERON:0003528!2.08e-39!34;UBERON:0001869!7.56e-39!32;UBERON:0003080!7.71e-39!42;UBERON:0002616!2.53e-38!59;UBERON:0001017!1.39e-37!82;UBERON:0001950!3.04e-37!20;UBERON:0000955!4.44e-37!69;UBERON:0006238!4.44e-37!69;UBERON:0001893!3.49e-36!34;UBERON:0000956!4.80e-36!25;UBERON:0000203!4.80e-36!25;UBERON:0005743!2.61e-35!86;UBERON:0000073!1.48e-34!94;UBERON:0001016!1.48e-34!94;UBERON:0002791!1.79e-34!33;UBERON:0003075!1.95e-28!86;UBERON:0007284!1.95e-28!86;UBERON:0002346!2.19e-28!90;UBERON:0003056!4.66e-26!61;UBERON:0000033!2.03e-22!123;UBERON:0000153!4.55e-22!129;UBERON:0007811!4.55e-22!129;UBERON:0007023!6.15e-21!115;UBERON:0000924!1.88e-19!173;UBERON:0006601!1.88e-19!173;UBERON:0004121!3.89e-19!169;UBERON:0001871!2.83e-14!7;UBERON:0002021!1.38e-12!5;UBERON:0000349!2.42e-12!5;UBERON:0001872!6.23e-12!5;UBERON:0000200!1.25e-09!6;UBERON:0002771!3.57e-08!3;UBERON:0000025!1.17e-07!194;UBERON:0000988!2.63e-07!3;UBERON:0000481!7.41e-07!347;UBERON:0000064!8.89e-07!219|ontology_enrichment_uberon_v019=UBERON:0002619;1.16e-46;22!UBERON:0001950;3.64e-43;20!UBERON:0000956;4.80e-41;25!UBERON:0000203;4.80e-41;25!UBERON:0001869;5.15e-34;32!UBERON:0002791;4.70e-33;32!UBERON:0001893;7.06e-30;34!UBERON:0003528;1.18e-29;34!UBERON:0002020;1.18e-29;34!UBERON:0002780;1.68e-26;41!UBERON:0001890;1.68e-26;41!UBERON:0002021;3.70e-25;5!UBERON:0001876;4.90e-17;2!UBERON:0001872;8.31e-15;5!UBERON:0000349;9.12e-15;5!UBERON:0000073;2.08e-14;53!UBERON:0002616;2.08e-14;53!UBERON:0001871;7.40e-11;6!UBERON:0003112;6.21e-09;1!UBERON:0001136;6.21e-09;1!UBERON:0001343;6.21e-09;1!UBERON:0001282;6.21e-09;1!UBERON:0009842;6.21e-09;1!UBERON:0003704;6.21e-09;1!UBERON:0011158;6.21e-09;1!UBERON:0004910;6.21e-09;1!UBERON:0004813;6.21e-09;1!UBERON:0001171;6.21e-09;1!UBERON:0001172;6.21e-09;1!UBERON:0003128;6.21e-09;1!UBERON:0001703;6.21e-09;1!UBERON:0002241;6.21e-09;1!UBERON:0001016;1.10e-08;83!UBERON:0002420;1.99e-08;9!UBERON:0007245;1.99e-08;9!UBERON:0010009;1.99e-08;9!UBERON:0010011;1.99e-08;9!UBERON:0000454;1.99e-08;9!UBERON:0000955;2.14e-08;68!UBERON:0001017;3.16e-08;75|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.90e-46,22;UBERON:0001950,7.03e-43,20;UBERON:0000956,7.42e-41,25;UBERON:0000203,7.42e-41,25;UBERON:0002791,2.19e-37,32;UBERON:0001869,2.19e-37,32;UBERON:0003528,4.04e-35,34;UBERON:0002020,4.04e-35,34;UBERON:0001893,4.04e-35,34;UBERON:0002780,1.48e-33,41;UBERON:0001890,1.48e-33,41;UBERON:0003080,1.48e-33,41;UBERON:0006240,1.48e-33,41;UBERON:0000073,1.53e-25,53;UBERON:0002616,1.53e-25,53;UBERON:0002021,7.81e-25,5;UBERON:0001049,4.60e-24,56;UBERON:0005068,4.60e-24,56;UBERON:0006241,4.60e-24,56;UBERON:0007135,4.60e-24,56;UBERON:0000955,4.59e-22,68;UBERON:0006238,4.59e-22,68;UBERON:0003056,6.42e-22,61;UBERON:0001016,1.47e-18,89;UBERON:0001017,3.53e-18,81;UBERON:0001876,4.54e-17,2;UBERON:0003075,9.96e-16,82;UBERON:0007284,9.96e-16,82;UBERON:0002346,6.91e-15,86;UBERON:0000349,7.24e-15,5;UBERON:0001872,7.59e-15,5;UBERON:0010314,6.15e-12,132;UBERON:0010371,6.77e-12,104;UBERON:0001871,7.42e-11,6;UBERON:0011216,4.81e-10,223;UBERON:0003112,4.91e-09,1;UBERON:0011158,4.91e-09,1;UBERON:0003128,4.91e-09,1;UBERON:0001703,4.91e-09,1;UBERON:0002241,4.91e-09,1;UBERON:0004761,4.91e-09,1;UBERON:0009617,4.91e-09,1;UBERON:0001136,5.31e-09,1;UBERON:0001343,5.31e-09,1;UBERON:0004910,5.31e-09,1;UBERON:0005154,5.31e-09,1;UBERON:0005295,5.31e-09,1;UBERON:0004813,5.31e-09,1;UBERON:0005297,5.31e-09,1;UBERON:0005294,5.31e-09,1;UBERON:0010141,5.31e-09,1;UBERON:0005891,5.31e-09,1;UBERON:0001282,6.22e-09,1;UBERON:0009842,6.22e-09,1;UBERON:0003704,6.22e-09,1;UBERON:0001171,6.22e-09,1;UBERON:0001172,6.22e-09,1;UBERON:0002420,1.67e-08,9;UBERON:0007245,1.67e-08,9;UBERON:0010009,1.67e-08,9;UBERON:0010011,1.67e-08,9;UBERON:0000454,1.67e-08,9;UBERON:0004121,2.04e-08,171;UBERON:0000924,2.04e-08,171;UBERON:0006601,2.04e-08,171;UBERON:0007023,1.03e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:98951729..98951731,+ | |||
|id=chr11:98951729..98951731,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.72e-10;19!CL:0000511;6.21e-09;1!CL:0002625;6.21e-09;1!CL:0000216;6.21e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.30e-10,19;CL:0000511,5.31e-09,1;CL:0002625,5.31e-09,1;CL:0000216,5.31e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr11:98951729..98951731,+ | |||
}} |
Revision as of 20:20, 10 September 2013
Short description: | p@chr11:98951729..98951731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:98951729..98951731, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.30e-10 | 19 |
androgen binding protein secreting cell | 5.31e-09 | 1 |
seminiferous tubule epithelial cell | 5.31e-09 | 1 |
Sertoli cell | 5.31e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.