FFCP PHASE1:Hg19::chr12:65175253..65175283,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C150|description=CAGE_peak_at_chr12:65175253..65175283,-|id=chr12:65175253..65175283,-|ontology_enrichment_celltype=CL:0000242!3.24e-09!2;CL:0002057!1.59e-08!42;CL:0000860!8.27e-08!45|ontology_enrichment_celltype_v019=CL:0000123;4.61e-131;2!CL:0000242;4.61e-131;2!CL:0000312;2.19e-53;5!CL:0000240;9.76e-45;6!CL:0000311;9.76e-45;6!CL:0000079;9.76e-45;6!CL:0000237;9.76e-45;6!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25!CL:0002077;1.21e-08;34|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41|ontology_enrichment_development_v019=CL:0000357;9.76e-45;6!CL:0000114;9.76e-45;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006947!4.32e-12!3;UBERON:0004054!4.32e-12!3;UBERON:0005904!3.60e-09!4;UBERON:0000007!1.19e-08!2|ontology_enrichment_uberon_v019=UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.794305140223502,0.225980740780532,0,0,0,0,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,11.2400377393652,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,1.19370465096821,0,0,0,0,0,0.437119121007915,0,0,0.942706188406504,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:65175253..65175283,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr12:65175253..65175283,- | |||
|id=chr12:65175253..65175283,- | |||
|ontology_enrichment_celltype=CL:0000242!3.24e-09!2;CL:0002057!1.59e-08!42;CL:0000860!8.27e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.61e-131;2!CL:0000242;4.61e-131;2!CL:0000312;2.19e-53;5!CL:0000240;9.76e-45;6!CL:0000311;9.76e-45;6!CL:0000079;9.76e-45;6!CL:0000237;9.76e-45;6!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25!CL:0002077;1.21e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;9.76e-45;6!CL:0000114;9.76e-45;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!4.32e-12!3;UBERON:0004054!4.32e-12!3;UBERON:0005904!3.60e-09!4;UBERON:0000007!1.19e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.794305140223502,0.225980740780532,0,0,0,0,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,11.2400377393652,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,1.19370465096821,0,0,0,0,0,0.437119121007915,0,0,0.942706188406504,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:65175253..65175283,- | |||
}} |
Revision as of 23:56, 10 September 2013
Short description: | p@chr12:65175253..65175283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:65175253..65175283, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.61e-131 | 2 |
keratinocyte | 2.19e-53 | 5 |
stratified squamous epithelial cell | 9.76e-45 | 6 |
keratin accumulating cell | 9.76e-45 | 6 |
stratified epithelial cell | 9.76e-45 | 6 |
keratinizing barrier epithelial cell | 9.76e-45 | 6 |
epithelial fate stem cell | 9.76e-45 | 6 |
stratified epithelial stem cell | 9.76e-45 | 6 |
surface ectodermal cell | 9.76e-45 | 6 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
ecto-epithelial cell | 6.54e-09 | 34 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.04e-18 | 15 |
outer epithelium | 1.04e-18 | 15 |
enveloping layer of ectoderm | 1.04e-18 | 15 |
skin of body | 1.42e-07 | 41 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.