FFCP PHASE1:Hg19::chr14:95090341..95090367,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=47bp_to_M22533_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_M22533_5end|id=chr14:95090341..95090367,+|ontology_enrichment_celltype=CL:0000181!1.08e-10!12;CL:0000417!1.08e-10!12;CL:0000668!1.08e-10!12;CL:0000414!1.08e-10!12;CL:0000412!1.08e-10!12;CL:0000182!1.08e-10!12|ontology_enrichment_celltype_v019=CL:0000182;3.72e-09;12!CL:0002549;9.27e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-09,12|ontology_enrichment_development_v019=UBERON:0006241;9.79e-16;3!UBERON:0003057;9.79e-16;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3498;9.27e-07;2|ontology_enrichment_disease_v019_2=DOID:4074,9.54e-07,2;DOID:4905,9.54e-07,2;DOID:3498,9.54e-07,2|ontology_enrichment_uberon=UBERON:0007023!2.09e-26!115;UBERON:0003075!4.19e-19!86;UBERON:0007284!4.19e-19!86;UBERON:0002346!6.39e-18!90;UBERON:0001049!8.14e-18!57;UBERON:0005068!8.14e-18!57;UBERON:0006241!8.14e-18!57;UBERON:0007135!8.14e-18!57;UBERON:0002298!3.49e-17!8;UBERON:0005743!4.20e-16!86;UBERON:0001017!9.20e-16!82;UBERON:0002616!3.56e-15!59;UBERON:0000073!6.04e-14!94;UBERON:0001016!6.04e-14!94;UBERON:0009497!1.47e-13!25;UBERON:0000015!1.47e-13!25;UBERON:0002423!1.47e-13!25;UBERON:0006235!1.47e-13!25;UBERON:0004161!1.47e-13!25;UBERON:0008835!2.15e-13!22;UBERON:0003894!2.15e-13!22;UBERON:0000955!2.92e-13!69;UBERON:0006238!2.92e-13!69;UBERON:0002107!4.00e-13!19;UBERON:0006925!4.00e-13!19;UBERON:0008836!4.00e-13!19;UBERON:0005057!9.08e-13!26;UBERON:0009854!1.06e-12!23;UBERON:0003056!2.81e-12!61;UBERON:0000025!8.87e-12!194;UBERON:0000477!1.30e-11!286;UBERON:0007499!1.74e-11!25;UBERON:0009856!6.00e-11!26;UBERON:0002308!7.41e-11!9;UBERON:0000125!7.41e-11!9;UBERON:0003080!7.81e-11!42;UBERON:0000475!9.13e-11!365;UBERON:0002368!9.72e-11!35;UBERON:0000949!1.22e-10!45;UBERON:0002420!1.61e-10!9;UBERON:0007245!1.61e-10!9;UBERON:0010009!1.61e-10!9;UBERON:0010011!1.61e-10!9;UBERON:0000454!1.61e-10!9;UBERON:0000033!8.14e-10!123;UBERON:0004121!1.12e-09!169;UBERON:0004111!1.38e-09!241;UBERON:0002780!1.46e-09!41;UBERON:0001890!1.46e-09!41;UBERON:0006240!1.46e-09!41;UBERON:0001896!1.78e-09!3;UBERON:0006331!1.78e-09!3;UBERON:0005290!1.78e-09!3;UBERON:0010096!1.78e-09!3;UBERON:0000924!2.85e-09!173;UBERON:0006601!2.85e-09!173;UBERON:0000483!3.04e-09!309;UBERON:0000153!4.66e-09!129;UBERON:0007811!4.66e-09!129;UBERON:0000119!4.79e-09!312;UBERON:0000062!5.01e-09!511;UBERON:0003076!7.09e-09!15;UBERON:0003057!7.09e-09!15;UBERON:0000481!6.39e-08!347;UBERON:0003929!7.32e-08!54;UBERON:0005177!9.34e-08!107;UBERON:0005172!1.15e-07!55;UBERON:0005173!1.15e-07!55;UBERON:0002417!1.22e-07!61;UBERON:0000916!1.22e-07!61;UBERON:0002020!2.50e-07!34;UBERON:0003528!2.50e-07!34;UBERON:0002365!3.17e-07!31;UBERON:0002330!3.17e-07!31;UBERON:0002148!4.55e-07!2;UBERON:0009662!4.55e-07!2|ontology_enrichment_uberon_v019=UBERON:0002148;9.55e-23;2!UBERON:0006331;9.55e-23;2!UBERON:0009662;9.55e-23;2!UBERON:0002298;5.91e-17;6!UBERON:0002240;9.79e-16;3!UBERON:0005174;9.79e-16;3!UBERON:0001137;9.79e-16;3!UBERON:0000988;1.65e-15;3!UBERON:0002107;7.10e-15;19!UBERON:0006925;7.10e-15;19!UBERON:0002368;2.58e-11;33!UBERON:0002423;2.76e-11;25!UBERON:0000949;1.14e-09;43!UBERON:0002365;4.47e-09;31!UBERON:0002330;4.47e-09;31!UBERON:0004733;9.13e-09;12!UBERON:0002028;9.13e-09;12!UBERON:0004732;3.94e-08;13!UBERON:0003127;6.24e-07;2!UBERON:0000007;9.27e-07;2!UBERON:0005629;9.27e-07;2!UBERON:0005358;9.27e-07;2!UBERON:0001886;9.27e-07;2!UBERON:0004086;9.27e-07;2!UBERON:0005282;9.27e-07;2!UBERON:0005281;9.27e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.49e-22,2;UBERON:0006331,1.49e-22,2;UBERON:0009662,1.49e-22,2;UBERON:0003076,3.63e-18,15;UBERON:0003057,3.63e-18,15;UBERON:0002298,8.00e-17,6;UBERON:0002240,7.83e-16,3;UBERON:0005174,7.83e-16,3;UBERON:0001137,7.83e-16,3;UBERON:0000988,2.21e-15,3;UBERON:0002107,7.11e-15,19;UBERON:0006925,7.11e-15,19;UBERON:0008836,7.11e-15,19;UBERON:0008835,7.75e-13,22;UBERON:0003894,7.75e-13,22;UBERON:0009854,2.83e-12,23;UBERON:0000949,1.48e-11,45;UBERON:0007499,2.76e-11,25;UBERON:0009497,2.76e-11,25;UBERON:0000015,2.76e-11,25;UBERON:0002423,2.76e-11,25;UBERON:0006235,2.76e-11,25;UBERON:0004161,2.76e-11,25;UBERON:0002368,3.26e-11,35;UBERON:0009856,7.57e-11,26;UBERON:0002365,4.45e-09,31;UBERON:0002330,4.45e-09,31;UBERON:0004733,1.06e-08,12;UBERON:0002028,1.06e-08,12;UBERON:0007277,1.06e-08,12;UBERON:0004732,4.51e-08,13;UBERON:0005172,3.71e-07,54;UBERON:0005173,3.71e-07,54;UBERON:0003127,6.42e-07,2|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=47bp_to_M22533_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_M22533_5end | |||
|id=chr14:95090341..95090367,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.08e-10!12;CL:0000417!1.08e-10!12;CL:0000668!1.08e-10!12;CL:0000414!1.08e-10!12;CL:0000412!1.08e-10!12;CL:0000182!1.08e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.72e-09;12!CL:0002549;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.79e-16;3!UBERON:0003057;9.79e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;9.27e-07;2!DOID:4905;9.27e-07;2!DOID:3498;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,9.54e-07,2;DOID:4905,9.54e-07,2;DOID:3498,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-26!115;UBERON:0003075!4.19e-19!86;UBERON:0007284!4.19e-19!86;UBERON:0002346!6.39e-18!90;UBERON:0001049!8.14e-18!57;UBERON:0005068!8.14e-18!57;UBERON:0006241!8.14e-18!57;UBERON:0007135!8.14e-18!57;UBERON:0002298!3.49e-17!8;UBERON:0005743!4.20e-16!86;UBERON:0001017!9.20e-16!82;UBERON:0002616!3.56e-15!59;UBERON:0000073!6.04e-14!94;UBERON:0001016!6.04e-14!94;UBERON:0009497!1.47e-13!25;UBERON:0000015!1.47e-13!25;UBERON:0002423!1.47e-13!25;UBERON:0006235!1.47e-13!25;UBERON:0004161!1.47e-13!25;UBERON:0008835!2.15e-13!22;UBERON:0003894!2.15e-13!22;UBERON:0000955!2.92e-13!69;UBERON:0006238!2.92e-13!69;UBERON:0002107!4.00e-13!19;UBERON:0006925!4.00e-13!19;UBERON:0008836!4.00e-13!19;UBERON:0005057!9.08e-13!26;UBERON:0009854!1.06e-12!23;UBERON:0003056!2.81e-12!61;UBERON:0000025!8.87e-12!194;UBERON:0000477!1.30e-11!286;UBERON:0007499!1.74e-11!25;UBERON:0009856!6.00e-11!26;UBERON:0002308!7.41e-11!9;UBERON:0000125!7.41e-11!9;UBERON:0003080!7.81e-11!42;UBERON:0000475!9.13e-11!365;UBERON:0002368!9.72e-11!35;UBERON:0000949!1.22e-10!45;UBERON:0002420!1.61e-10!9;UBERON:0007245!1.61e-10!9;UBERON:0010009!1.61e-10!9;UBERON:0010011!1.61e-10!9;UBERON:0000454!1.61e-10!9;UBERON:0000033!8.14e-10!123;UBERON:0004121!1.12e-09!169;UBERON:0004111!1.38e-09!241;UBERON:0002780!1.46e-09!41;UBERON:0001890!1.46e-09!41;UBERON:0006240!1.46e-09!41;UBERON:0001896!1.78e-09!3;UBERON:0006331!1.78e-09!3;UBERON:0005290!1.78e-09!3;UBERON:0010096!1.78e-09!3;UBERON:0000924!2.85e-09!173;UBERON:0006601!2.85e-09!173;UBERON:0000483!3.04e-09!309;UBERON:0000153!4.66e-09!129;UBERON:0007811!4.66e-09!129;UBERON:0000119!4.79e-09!312;UBERON:0000062!5.01e-09!511;UBERON:0003076!7.09e-09!15;UBERON:0003057!7.09e-09!15;UBERON:0000481!6.39e-08!347;UBERON:0003929!7.32e-08!54;UBERON:0005177!9.34e-08!107;UBERON:0005172!1.15e-07!55;UBERON:0005173!1.15e-07!55;UBERON:0002417!1.22e-07!61;UBERON:0000916!1.22e-07!61;UBERON:0002020!2.50e-07!34;UBERON:0003528!2.50e-07!34;UBERON:0002365!3.17e-07!31;UBERON:0002330!3.17e-07!31;UBERON:0002148!4.55e-07!2;UBERON:0009662!4.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;9.55e-23;2!UBERON:0006331;9.55e-23;2!UBERON:0009662;9.55e-23;2!UBERON:0002298;5.91e-17;6!UBERON:0002240;9.79e-16;3!UBERON:0005174;9.79e-16;3!UBERON:0001137;9.79e-16;3!UBERON:0000988;1.65e-15;3!UBERON:0002107;7.10e-15;19!UBERON:0006925;7.10e-15;19!UBERON:0002368;2.58e-11;33!UBERON:0002423;2.76e-11;25!UBERON:0000949;1.14e-09;43!UBERON:0002365;4.47e-09;31!UBERON:0002330;4.47e-09;31!UBERON:0004733;9.13e-09;12!UBERON:0002028;9.13e-09;12!UBERON:0004732;3.94e-08;13!UBERON:0003127;6.24e-07;2!UBERON:0000007;9.27e-07;2!UBERON:0005629;9.27e-07;2!UBERON:0005358;9.27e-07;2!UBERON:0001886;9.27e-07;2!UBERON:0004086;9.27e-07;2!UBERON:0005282;9.27e-07;2!UBERON:0005281;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.49e-22,2;UBERON:0006331,1.49e-22,2;UBERON:0009662,1.49e-22,2;UBERON:0003076,3.63e-18,15;UBERON:0003057,3.63e-18,15;UBERON:0002298,8.00e-17,6;UBERON:0002240,7.83e-16,3;UBERON:0005174,7.83e-16,3;UBERON:0001137,7.83e-16,3;UBERON:0000988,2.21e-15,3;UBERON:0002107,7.11e-15,19;UBERON:0006925,7.11e-15,19;UBERON:0008836,7.11e-15,19;UBERON:0008835,7.75e-13,22;UBERON:0003894,7.75e-13,22;UBERON:0009854,2.83e-12,23;UBERON:0000949,1.48e-11,45;UBERON:0007499,2.76e-11,25;UBERON:0009497,2.76e-11,25;UBERON:0000015,2.76e-11,25;UBERON:0002423,2.76e-11,25;UBERON:0006235,2.76e-11,25;UBERON:0004161,2.76e-11,25;UBERON:0002368,3.26e-11,35;UBERON:0009856,7.57e-11,26;UBERON:0002365,4.45e-09,31;UBERON:0002330,4.45e-09,31;UBERON:0004733,1.06e-08,12;UBERON:0002028,1.06e-08,12;UBERON:0007277,1.06e-08,12;UBERON:0004732,4.51e-08,13;UBERON:0005172,3.71e-07,54;UBERON:0005173,3.71e-07,54;UBERON:0003127,6.42e-07,2 | |||
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|short_description=p1@M22533 | |||
}} |
Revision as of 06:11, 11 September 2013
Short description: | p1@M22533 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_M22533_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 47bp_to_M22533_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.67e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 1.49e-22 | 2 |
brainstem nucleus | 1.49e-22 | 2 |
hindbrain nucleus | 1.49e-22 | 2 |
posterior neural tube | 3.63e-18 | 15 |
chordal neural plate | 3.63e-18 | 15 |
brainstem | 8.00e-17 | 6 |
spinal cord | 7.83e-16 | 3 |
dorsal region element | 7.83e-16 | 3 |
dorsum | 7.83e-16 | 3 |
pons | 2.21e-15 | 3 |
liver | 7.11e-15 | 19 |
digestive gland | 7.11e-15 | 19 |
liver bud | 7.11e-15 | 19 |
hepatic diverticulum | 7.75e-13 | 22 |
liver primordium | 7.75e-13 | 22 |
digestive tract diverticulum | 2.83e-12 | 23 |
endocrine system | 1.48e-11 | 45 |
epithelial sac | 2.76e-11 | 25 |
epithelium of foregut-midgut junction | 2.76e-11 | 25 |
anatomical boundary | 2.76e-11 | 25 |
hepatobiliary system | 2.76e-11 | 25 |
foregut-midgut junction | 2.76e-11 | 25 |
septum transversum | 2.76e-11 | 25 |
endocrine gland | 3.26e-11 | 35 |
sac | 7.57e-11 | 26 |
exocrine gland | 4.45e-09 | 31 |
exocrine system | 4.45e-09 | 31 |
segmental subdivision of hindbrain | 1.06e-08 | 12 |
hindbrain | 1.06e-08 | 12 |
presumptive hindbrain | 1.06e-08 | 12 |
segmental subdivision of nervous system | 4.51e-08 | 13 |
abdomen element | 3.71e-07 | 54 |
abdominal segment element | 3.71e-07 | 54 |
open tracheal system trachea | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 9.54e-07 | 2 |
pancreatic carcinoma | 9.54e-07 | 2 |
pancreatic ductal adenocarcinoma | 9.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.