FFCP PHASE1:Hg19::chr15:48818352..48818368,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C834|description=CAGE_peak_at_chr15:48818352..48818368,-|id=chr15:48818352..48818368,-|ontology_enrichment_celltype=CL:0000057!6.09e-31!75;CL:0000055!3.87e-26!180;CL:0002620!1.26e-16!23;CL:0000048!1.73e-13!430;CL:0000723!9.98e-13!436;CL:0000034!9.31e-12!444;CL:0002334!1.05e-11!12;CL:0002320!7.84e-09!365;CL:0000134!8.13e-09!358;CL:0002371!2.13e-08!591;CL:0000144!2.84e-07!625;CL:0000153!4.77e-07!9;CL:0000447!4.77e-07!9|ontology_enrichment_celltype_v019=CL:0002620;3.84e-22;23!CL:0002334;6.46e-15;12!CL:0000057;7.68e-12;73!CL:0002615;6.99e-10;3!CL:0002580;7.99e-10;3!CL:0002579;7.99e-10;3!CL:0000135;6.04e-09;3!CL:0000388;6.04e-09;3!CL:0000138;6.56e-08;6!CL:0000153;8.95e-08;9!CL:0000447;8.95e-08;9!CL:1000306;3.12e-07;4!CL:0002547;3.12e-07;4|ontology_enrichment_celltype_v019_2=CL:0000057,4.82e-33,76;CL:0002620,6.41e-22,23;CL:0002334,5.25e-15,12;CL:0000048,5.30e-13,427;CL:0000723,1.27e-12,433;CL:0000134,1.29e-12,354;CL:0000034,3.92e-12,441;CL:0002320,4.05e-12,361;CL:0000219,2.27e-10,386;CL:0002580,3.88e-10,3;CL:0002615,9.24e-10,3;CL:0002579,1.87e-09,3;CL:0000135,6.36e-09,3;CL:0000388,6.36e-09,3;CL:0000058,3.01e-08,6;CL:0000138,3.01e-08,6;CL:0000153,3.77e-08,9;CL:0000447,3.77e-08,9;CL:1000306,3.58e-07,4;CL:0002547,3.58e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!1.73e-07!14|ontology_enrichment_disease_v019=DOID:17;6.75e-15;5!DOID:450;6.75e-15;5!DOID:66;6.75e-15;5!DOID:423;6.75e-15;5!DOID:0080000;6.75e-15;5!DOID:11722;6.75e-15;5|ontology_enrichment_disease_v019_2=DOID:17,6.78e-15,5;DOID:450,6.78e-15,5;DOID:66,6.78e-15,5;DOID:423,6.78e-15,5;DOID:0080000,6.78e-15,5;DOID:11722,6.78e-15,5|ontology_enrichment_uberon=UBERON:0004923!1.56e-11!57;UBERON:0003102!6.70e-10!95;UBERON:0000914!2.50e-09!83;UBERON:0002329!2.50e-09!83;UBERON:0003077!2.50e-09!83;UBERON:0003059!2.50e-09!83;UBERON:0007282!2.50e-09!83;UBERON:0009618!2.50e-09!83;UBERON:0007285!2.50e-09!83;UBERON:0005631!3.08e-09!14;UBERON:0000158!3.08e-09!14;UBERON:0002097!3.37e-09!40;UBERON:0002199!5.10e-09!45;UBERON:0002416!5.10e-09!45;UBERON:0002384!5.67e-09!375;UBERON:0004457!1.29e-08!12;UBERON:0000042!1.29e-08!12;UBERON:0000478!1.09e-07!24;UBERON:0003688!1.67e-07!6;UBERON:0002358!1.67e-07!6;UBERON:0003684!1.67e-07!6;UBERON:0001178!1.67e-07!6;UBERON:0004290!1.88e-07!70;UBERON:0000486!5.02e-07!82;UBERON:0004871!5.16e-07!8|ontology_enrichment_uberon_v019=UBERON:0003688;5.40e-18;6!UBERON:0002358;5.40e-18;6!UBERON:0003684;5.40e-18;6!UBERON:0001178;5.40e-18;6!UBERON:0004457;1.30e-15;9!UBERON:0000042;1.30e-15;9!UBERON:0002097;1.11e-10;41!UBERON:0002199;2.10e-09;46!UBERON:0002416;2.10e-09;46!UBERON:0007846;6.04e-09;3!UBERON:0000043;6.04e-09;3!UBERON:0007845;6.04e-09;3!UBERON:0002384;1.00e-07;198!UBERON:0004797;3.12e-07;4!UBERON:0000415;3.12e-07;4!UBERON:0007240;3.12e-07;4!UBERON:0005742;3.12e-07;4!UBERON:0005734;3.12e-07;4!UBERON:0004664;3.12e-07;4!UBERON:0004663;3.12e-07;4!UBERON:0005406;6.99e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.66e-17,6;UBERON:0002358,1.66e-17,6;UBERON:0003684,1.66e-17,6;UBERON:0001178,1.66e-17,6;UBERON:0002097,2.72e-14,41;UBERON:0002199,2.63e-12,46;UBERON:0002416,2.63e-12,46;UBERON:0002384,3.32e-12,371;UBERON:0004457,2.89e-11,12;UBERON:0000042,2.89e-11,12;UBERON:0007846,6.36e-09,3;UBERON:0000043,6.36e-09,3;UBERON:0007845,6.36e-09,3;UBERON:0003102,1.38e-07,99;UBERON:0004923,2.13e-07,66;UBERON:0005406,3.34e-07,2;UBERON:0000415,3.58e-07,4;UBERON:0007240,3.58e-07,4;UBERON:0005742,3.58e-07,4;UBERON:0005734,3.58e-07,4;UBERON:0004664,3.58e-07,4;UBERON:0004663,3.58e-07,4|phase1_expression=0.908391896352783,3.63970890614671,1.26858963686374,4.00293193412522,2.23480547213644,1.74467704820074,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,3.50936537445123,1.59331170856906,1.5905718941022,0.973269740605272,0.0945348171640679,0.443458794925128,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.2663051166458,0.926864265692532,5.44989579422746,1.41867352879343,1.12135520028461,0,1.48000529050296,0.311211035399766,0.538842688278752,0.326923806226917,0.454072282934794,1.15235184896,0,0.624320153660641,0,0.298897361103602,0.469737994575059,0.809364721840658,0.280901613404497,0.204154171254893,0.245668634623536,0.206651562351531,0,1.48360157567134,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,1.5324389789951,0.300476117813194,0.226864366320042,2.51145489964407,2.34913127700424,1.907387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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C834 | |||
|description=CAGE_peak_at_chr15:48818352..48818368,- | |||
|id=chr15:48818352..48818368,- | |||
|ontology_enrichment_celltype=CL:0000057!6.09e-31!75;CL:0000055!3.87e-26!180;CL:0002620!1.26e-16!23;CL:0000048!1.73e-13!430;CL:0000723!9.98e-13!436;CL:0000034!9.31e-12!444;CL:0002334!1.05e-11!12;CL:0002320!7.84e-09!365;CL:0000134!8.13e-09!358;CL:0002371!2.13e-08!591;CL:0000144!2.84e-07!625;CL:0000153!4.77e-07!9;CL:0000447!4.77e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.84e-22;23!CL:0002334;6.46e-15;12!CL:0000057;7.68e-12;73!CL:0002615;6.99e-10;3!CL:0002580;7.99e-10;3!CL:0002579;7.99e-10;3!CL:0000135;6.04e-09;3!CL:0000388;6.04e-09;3!CL:0000138;6.56e-08;6!CL:0000153;8.95e-08;9!CL:0000447;8.95e-08;9!CL:1000306;3.12e-07;4!CL:0002547;3.12e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.82e-33,76;CL:0002620,6.41e-22,23;CL:0002334,5.25e-15,12;CL:0000048,5.30e-13,427;CL:0000723,1.27e-12,433;CL:0000134,1.29e-12,354;CL:0000034,3.92e-12,441;CL:0002320,4.05e-12,361;CL:0000219,2.27e-10,386;CL:0002580,3.88e-10,3;CL:0002615,9.24e-10,3;CL:0002579,1.87e-09,3;CL:0000135,6.36e-09,3;CL:0000388,6.36e-09,3;CL:0000058,3.01e-08,6;CL:0000138,3.01e-08,6;CL:0000153,3.77e-08,9;CL:0000447,3.77e-08,9;CL:1000306,3.58e-07,4;CL:0002547,3.58e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;6.75e-15;5!DOID:450;6.75e-15;5!DOID:66;6.75e-15;5!DOID:423;6.75e-15;5!DOID:0080000;6.75e-15;5!DOID:11722;6.75e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.78e-15,5;DOID:450,6.78e-15,5;DOID:66,6.78e-15,5;DOID:423,6.78e-15,5;DOID:0080000,6.78e-15,5;DOID:11722,6.78e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.56e-11!57;UBERON:0003102!6.70e-10!95;UBERON:0000914!2.50e-09!83;UBERON:0002329!2.50e-09!83;UBERON:0003077!2.50e-09!83;UBERON:0003059!2.50e-09!83;UBERON:0007282!2.50e-09!83;UBERON:0009618!2.50e-09!83;UBERON:0007285!2.50e-09!83;UBERON:0005631!3.08e-09!14;UBERON:0000158!3.08e-09!14;UBERON:0002097!3.37e-09!40;UBERON:0002199!5.10e-09!45;UBERON:0002416!5.10e-09!45;UBERON:0002384!5.67e-09!375;UBERON:0004457!1.29e-08!12;UBERON:0000042!1.29e-08!12;UBERON:0000478!1.09e-07!24;UBERON:0003688!1.67e-07!6;UBERON:0002358!1.67e-07!6;UBERON:0003684!1.67e-07!6;UBERON:0001178!1.67e-07!6;UBERON:0004290!1.88e-07!70;UBERON:0000486!5.02e-07!82;UBERON:0004871!5.16e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.40e-18;6!UBERON:0002358;5.40e-18;6!UBERON:0003684;5.40e-18;6!UBERON:0001178;5.40e-18;6!UBERON:0004457;1.30e-15;9!UBERON:0000042;1.30e-15;9!UBERON:0002097;1.11e-10;41!UBERON:0002199;2.10e-09;46!UBERON:0002416;2.10e-09;46!UBERON:0007846;6.04e-09;3!UBERON:0000043;6.04e-09;3!UBERON:0007845;6.04e-09;3!UBERON:0002384;1.00e-07;198!UBERON:0004797;3.12e-07;4!UBERON:0000415;3.12e-07;4!UBERON:0007240;3.12e-07;4!UBERON:0005742;3.12e-07;4!UBERON:0005734;3.12e-07;4!UBERON:0004664;3.12e-07;4!UBERON:0004663;3.12e-07;4!UBERON:0005406;6.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.66e-17,6;UBERON:0002358,1.66e-17,6;UBERON:0003684,1.66e-17,6;UBERON:0001178,1.66e-17,6;UBERON:0002097,2.72e-14,41;UBERON:0002199,2.63e-12,46;UBERON:0002416,2.63e-12,46;UBERON:0002384,3.32e-12,371;UBERON:0004457,2.89e-11,12;UBERON:0000042,2.89e-11,12;UBERON:0007846,6.36e-09,3;UBERON:0000043,6.36e-09,3;UBERON:0007845,6.36e-09,3;UBERON:0003102,1.38e-07,99;UBERON:0004923,2.13e-07,66;UBERON:0005406,3.34e-07,2;UBERON:0000415,3.58e-07,4;UBERON:0007240,3.58e-07,4;UBERON:0005742,3.58e-07,4;UBERON:0005734,3.58e-07,4;UBERON:0004664,3.58e-07,4;UBERON:0004663,3.58e-07,4 | |||
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| |||
|short_description=p@chr15:48818352..48818368,- | |||
}} |
Revision as of 07:16, 11 September 2013
Short description: | p@chr15:48818352..48818368, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:48818352..48818368, - |
Coexpression cluster: | C834_Fibroblast_Sertoli_chorionic_Smooth_Synoviocyte_Preadipocyte_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.82e-33 | 76 |
skin fibroblast | 6.41e-22 | 23 |
preadipocyte | 5.25e-15 | 12 |
multi fate stem cell | 5.30e-13 | 427 |
somatic stem cell | 1.27e-12 | 433 |
mesenchymal cell | 1.29e-12 | 354 |
stem cell | 3.92e-12 | 441 |
connective tissue cell | 4.05e-12 | 361 |
motile cell | 2.27e-10 | 386 |
preadipocyte of the breast | 3.88e-10 | 3 |
adipocyte of omentum tissue | 9.24e-10 | 3 |
omentum preadipocyte | 1.87e-09 | 3 |
fibrocyte | 6.36e-09 | 3 |
tendon cell | 6.36e-09 | 3 |
chondroblast | 3.01e-08 | 6 |
chondrocyte | 3.01e-08 | 6 |
GAG secreting cell | 3.77e-08 | 9 |
carbohydrate secreting cell | 3.77e-08 | 9 |
fibroblast of tunica adventitia of artery | 3.58e-07 | 4 |
fibroblast of the aortic adventitia | 3.58e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.66e-17 | 6 |
peritoneum | 1.66e-17 | 6 |
abdominal cavity | 1.66e-17 | 6 |
visceral peritoneum | 1.66e-17 | 6 |
skin of body | 2.72e-14 | 41 |
integument | 2.63e-12 | 46 |
integumental system | 2.63e-12 | 46 |
connective tissue | 3.32e-12 | 371 |
cavity lining | 2.89e-11 | 12 |
serous membrane | 2.89e-11 | 12 |
dense regular connective tissue | 6.36e-09 | 3 |
tendon | 6.36e-09 | 3 |
regular connective tissue | 6.36e-09 | 3 |
surface structure | 1.38e-07 | 99 |
organ component layer | 2.13e-07 | 66 |
perirenal fat | 3.34e-07 | 2 |
artery wall | 3.58e-07 | 4 |
tunica adventitia of artery | 3.58e-07 | 4 |
adventitia | 3.58e-07 | 4 |
tunica adventitia of blood vessel | 3.58e-07 | 4 |
aorta tunica adventitia | 3.58e-07 | 4 |
aorta wall | 3.58e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.78e-15 | 5 |
myotonic disease | 6.78e-15 | 5 |
muscle tissue disease | 6.78e-15 | 5 |
myopathy | 6.78e-15 | 5 |
muscular disease | 6.78e-15 | 5 |
myotonic dystrophy | 6.78e-15 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.