FFCP PHASE1:Hg19::chr16:81129886..81129900,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2653|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4208|TSSclassifier=S|UniProt=P23434|association_with_transcript=79bp_to_NM_004483,NR_033249,uc002fgd.2,uc002fge.2_5end|coexpression_cluster_id=C248|description=CAGE_peak_2_at_GCSH_5end|id=chr16:81129886..81129900,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;4.43e-09;6!CL:0000404;4.43e-09;6!CL:0000710;8.62e-08;20!CL:0000197;1.03e-07;6!CL:0000098;1.03e-07;6!CL:0002167;1.03e-07;6!CL:0000075;7.59e-07;27|ontology_enrichment_celltype_v019_2=CL:0000540,4.17e-09,6;CL:0000031,4.17e-09,6;CL:0000404,4.17e-09,6;CL:0000710,9.72e-08,20;CL:0000197,1.03e-07,6;CL:0000098,1.03e-07,6;CL:0002167,1.03e-07,6;CL:0000047,8.36e-07,8;CL:0000075,8.49e-07,27|ontology_enrichment_development_v019=CL:0000031;4.43e-09;6!UBERON:0008947;3.70e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.48e-15!9|ontology_enrichment_uberon_v019=UBERON:0001737;3.86e-27;9!UBERON:0001557;3.86e-27;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-27,9;UBERON:0001557,6.37e-12,19;UBERON:0001017,9.89e-09,81;UBERON:0001049,1.56e-08,56;UBERON:0005068,1.56e-08,56;UBERON:0006241,1.56e-08,56;UBERON:0007135,1.56e-08,56;UBERON:0001016,1.89e-08,89;UBERON:0000073,6.94e-08,53;UBERON:0002616,6.94e-08,53;UBERON:0003075,1.98e-07,82;UBERON:0007284,1.98e-07,82;UBERON:0002346,6.68e-07,86|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,3.61616716814386,2.92124036154949,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,2.68511379871414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,5.55105871926382,7.2995471815166,0,0,0,0,0,2.48444280083672,6.40621822296786,4.09718750801919,2.97793726377464,5.44698610231015,2.84724742933316,4.44943316928543,5.29797955838434,8.46443745282059,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,2.74508496477641,0,0,0,0.0925884451585296,0,0,0,1.39116485970092,0.70445216541493,0,0.462985512576611,0.951270761172991,0,0,0,0,0,0,2.51973192298289,2.97727704209012,0,0,0,0,0.704387472105808,0.414656231081544,0.288239906833923,0.37872730027914,1.07946420296687,0,0,0,0,1.20137223137567,1.42913216315289,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,0.502257091432126,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0.254094624222463,0,0,0,3.82763250991898,0,0,0,0,0,0.271265023699736,2.70362119990049,1.42743191037729,2.83864347061082,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,1.31178950409327,0,0,0,1.43411352204052,2.16147890228867,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,3.57084134302011,0,0,0,0,2.87796022262726,0,0,0,0,0,0,0,0,0,0,5.13865789104368,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0,6.95903353436409,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,3.54296554325536,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,2.23300811812344,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,6.60462317580768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,4.77137813885582,0,7.23389168092586,6.87697182986169,17.4484941972258,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74920573448497,0,0.342173675768659,0,0,0,0,0,0,0,0,2.72008901684737,1.5041393641362,0.306345576763462,0.983617892129413,0,5.31640907980192,2.44052529803926,0,3.44045517414043,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,2.24901556081802,0.155262956876259,1.24411862352257,0.265841714557995,2.08698024724694,0,1.90402606084398,0,0,0,1.85613503951397,0.398095888698616,0,2.06037423109676,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90539049306924,0,0,0,0,0,0,0,3.74991285114801,0,1.82089681270989,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,2.48165108531456,0.955538938977433,0,0,0,4.53200186031526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33724394095407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p2@GCSH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4208 | |||
|TSSclassifier=S | |||
|UniProt=P23434 | |||
|association_with_transcript=79bp_to_NM_004483,NR_033249,uc002fgd.2,uc002fge.2_5end | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_2_at_GCSH_5end | |||
|id=chr16:81129886..81129900,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.43e-09;6!CL:0000404;4.43e-09;6!CL:0000710;8.62e-08;20!CL:0000197;1.03e-07;6!CL:0000098;1.03e-07;6!CL:0002167;1.03e-07;6!CL:0000075;7.59e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.17e-09,6;CL:0000031,4.17e-09,6;CL:0000404,4.17e-09,6;CL:0000710,9.72e-08,20;CL:0000197,1.03e-07,6;CL:0000098,1.03e-07,6;CL:0002167,1.03e-07,6;CL:0000047,8.36e-07,8;CL:0000075,8.49e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000031;4.43e-09;6!UBERON:0008947;3.70e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.48e-15!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.86e-27;9!UBERON:0001557;3.86e-27;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.87e-27,9;UBERON:0001557,6.37e-12,19;UBERON:0001017,9.89e-09,81;UBERON:0001049,1.56e-08,56;UBERON:0005068,1.56e-08,56;UBERON:0006241,1.56e-08,56;UBERON:0007135,1.56e-08,56;UBERON:0001016,1.89e-08,89;UBERON:0000073,6.94e-08,53;UBERON:0002616,6.94e-08,53;UBERON:0003075,1.98e-07,82;UBERON:0007284,1.98e-07,82;UBERON:0002346,6.68e-07,86 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,3.61616716814386,2.92124036154949,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,2.68511379871414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,5.55105871926382,7.2995471815166,0,0,0,0,0,2.48444280083672,6.40621822296786,4.09718750801919,2.97793726377464,5.44698610231015,2.84724742933316,4.44943316928543,5.29797955838434,8.46443745282059,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,2.74508496477641,0,0,0,0.0925884451585296,0,0,0,1.39116485970092,0.70445216541493,0,0.462985512576611,0.951270761172991,0,0,0,0,0,0,2.51973192298289,2.97727704209012,0,0,0,0,0.704387472105808,0.414656231081544,0.288239906833923,0.37872730027914,1.07946420296687,0,0,0,0,1.20137223137567,1.42913216315289,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,0.502257091432126,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0.254094624222463,0,0,0,3.82763250991898,0,0,0,0,0,0.271265023699736,2.70362119990049,1.42743191037729,2.83864347061082,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,1.31178950409327,0,0,0,1.43411352204052,2.16147890228867,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,3.57084134302011,0,0,0,0,2.87796022262726,0,0,0,0,0,0,0,0,0,0,5.13865789104368,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0,6.95903353436409,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,3.54296554325536,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,2.23300811812344,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,6.60462317580768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,4.77137813885582,0,7.23389168092586,6.87697182986169,17.4484941972258,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74920573448497,0,0.342173675768659,0,0,0,0,0,0,0,0,2.72008901684737,1.5041393641362,0.306345576763462,0.983617892129413,0,5.31640907980192,2.44052529803926,0,3.44045517414043,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,2.24901556081802,0.155262956876259,1.24411862352257,0.265841714557995,2.08698024724694,0,1.90402606084398,0,0,0,1.85613503951397,0.398095888698616,0,2.06037423109676,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90539049306924,0,0,0,0,0,0,0,3.74991285114801,0,1.82089681270989,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,2.48165108531456,0.955538938977433,0,0,0,4.53200186031526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33724394095407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GCSH | |||
}} |
Revision as of 11:42, 11 September 2013
Short description: | p2@GCSH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GCSH_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | 79bp_to_NM_004483, NR_033249, uc002fgd.2, uc002fge.2_5end |
EntrezGene: | GCSH |
HGNC: | 4208 |
UniProt: | P23434 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.17e-09 | 6 |
neuroblast | 4.17e-09 | 6 |
electrically signaling cell | 4.17e-09 | 6 |
neurecto-epithelial cell | 9.72e-08 | 20 |
receptor cell | 1.03e-07 | 6 |
sensory epithelial cell | 1.03e-07 | 6 |
olfactory epithelial cell | 1.03e-07 | 6 |
neuronal stem cell | 8.36e-07 | 8 |
columnar/cuboidal epithelial cell | 8.49e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.87e-27 | 9 |
upper respiratory tract | 6.37e-12 | 19 |
central nervous system | 9.89e-09 | 81 |
neural tube | 1.56e-08 | 56 |
neural rod | 1.56e-08 | 56 |
future spinal cord | 1.56e-08 | 56 |
neural keel | 1.56e-08 | 56 |
nervous system | 1.89e-08 | 89 |
regional part of nervous system | 6.94e-08 | 53 |
regional part of brain | 6.94e-08 | 53 |
neural plate | 1.98e-07 | 82 |
presumptive neural plate | 1.98e-07 | 82 |
neurectoderm | 6.68e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.