FFCP PHASE1:Hg19::chr18:48556573..48556640,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4089 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6770 | |||
|TSSclassifier=S | |||
|UniProt=Q13485,Q9BYG6 | |||
|association_with_transcript=0bp_to_ENST00000342988,ENST00000544926,NM_005359,uc010xdp.1_5end | |||
|description=CAGE_peak_1_at_SMAD4_5end | |||
|id=chr18:48556573..48556640,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-21!115;UBERON:0000073!1.60e-09!94;UBERON:0001016!1.60e-09!94;UBERON:0005743!2.98e-08!86;UBERON:0001017!4.33e-08!82;UBERON:0001049!8.27e-07!57;UBERON:0005068!8.27e-07!57;UBERON:0006241!8.27e-07!57;UBERON:0007135!8.27e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.65e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-21,114;UBERON:0001016,5.51e-09,89;UBERON:0001017,9.90e-08,81 | |||
|phase1_expression=53.4134435055436,38.538094300377,65.9666611169145,54.0395811106904,29.9463933266283,45.3616032532192,30.3959853801973,30.9542737979147,37.6107304607768,26.539265142163,11.8626198555313,47.8386604965077,38.7737457995827,59.2840830678623,48.0526194805478,42.3564842264618,48.8182567699421,48.2004659655666,48.3053470802602,43.8310966753365,42.2281430875604,42.6298421210199,85.870796139317,71.9959475883371,73.819072081744,32.5521108486272,31.5266263487792,31.2481801815307,42.8767061765305,40.3020868002073,54.8049076538909,17.4690032650996,21.9880320708123,23.2945026405076,54.3045076067914,47.0580159533365,80.4465203777481,42.6576464569546,35.4963672022151,44.0532067553179,76.3551767158142,65.4265205358339,68.5151009906936,75.6070841653736,86.1557151610485,80.7804923755428,59.2694044109496,64.9645263074485,48.9336066014264,43.4415512406447,50.7198198927619,39.4925323913937,32.0613483085055,47.7658665852031,39.2736811123591,67.5789998957951,72.0472236152713,56.4055945957162,41.0152415777009,53.2742184946315,42.1962503027367,92.3583640522805,74.200480635247,78.8515788485484,66.1677064073172,71.4905383110836,69.7560918875044,56.0284523522537,53.7127405972807,49.0846789033564,76.8857368344378,61.5023652099233,62.0266279384133,41.8285466897645,38.4813782936729,48.0118298214181,54.7040433683431,63.3746487791157,58.6648391444342,48.167153692271,48.7345859137771,48.2233365938634,72.1584602291423,79.7362372442712,95.1774901634004,104.122174306228,82.4815733294186,78.7410842737642,81.308519352538,78.2324078718999,72.2900470769,74.5791230501092,70.7205472031673,63.4422377179324,70.063570372692,55.3106578027662,82.0279741374684,82.9252709400738,57.5684197198626,69.3823955871314,108.532114788986,112.680577764867,111.051235192509,59.1589526060272,67.4647528117377,70.2262445830079,68.5133775325489,47.6499709379512,55.7954601031878,58.5398940389087,77.3780049800375,61.7280572615662,100.834862950201,109.156657860603,84.6737742820312,63.6798505960322,70.1293503291516,76.9725477881091,74.3877894537338,81.5527460669688,89.1984331783293,81.7388758225602,81.1599891829195,70.5206227460845,128.678648348916,68.4286258407209,73.0803917259731,47.7807981442616,48.6741156325983,60.6814252268928,97.5227465255847,60.3630773733273,63.5476932362346,48.4328464195319,67.6806179358451,49.3926629656409,39.764297352555,44.7704080678425,70.3339039700665,54.3237023783282,53.6670540585,76.4917800906642,20.4005361443824,21.1347132387125,32.779286759123,33.25877982416,29.9155411167447,56.7607685846714,44.0436081300698,45.3178151622069,43.131442398575,46.4526681357307,43.7397032025569,45.2246353539208,43.2084419296203,36.865817619969,34.0661795455001,50.1328512788498,56.5668357671869,70.2913286805807,40.6857610280238,38.7738773916441,41.4905497831888,44.4872327218501,41.3172393419697,54.2942347967205,40.1907577000844,46.7337644005787,33.7296602424943,46.5140173188383,45.2508307508106,127.827004912981,127.967487168947,29.6543955456923,56.157830541571,46.7266588042299,45.5487581997473,53.925284700777,47.8802315967782,51.0216616129499,50.1720279929613,33.3001190363166,63.7982622569521,52.1330300909693,43.6443281312935,55.3968185180449,64.5317035417599,51.5507150034353,39.0200096037901,39.9330275081115,42.8917713183669,53.5501313815568,50.8281045315933,51.404995253023,55.529934581331,47.4140464823424,73.6712819783208,58.2121400068206,66.7620709052104,30.9454863058929,24.4330168217521,56.8976065164744,62.4341414161101,51.8109895955422,39.9469635001563,49.9575107152402,60.5459377393585,45.7131698134885,65.8359962978123,71.7552826430387,63.5795703478686,56.4171260638676,52.6598424408423,74.9733971532781,71.0966391186673,52.9957683237576,46.2825774515693,63.6133111095169,84.3177071563462,54.3130750911208,55.3814964325918,40.5023434875114,52.9029048008721,41.7443442832721,36.5479801591718,37.2845974005705,102.335939442731,134.517714846308,94.9304513243965,88.1118967630649,89.0692603590968,111.318094518128,42.2413737290503,55.961961622781,38.6777779786946,58.5103589320294,31.7626971934618,37.9764828127899,49.9010682631181,41.9359191997259,41.2499458019153,39.0004204925407,47.2168532031082,40.98871768069,42.5800579322001,44.2459230488349,28.0499072757366,21.0362660705169,56.3856395524018,35.2820907325301,63.3775174109154,73.712041250822,60.8513603881846,75.4901899999052,30.1321674430628,43.406656005527,36.1078438994378,30.3484733795573,38.7036543784779,61.3861391401051,43.9841212168938,16.6389565644733,43.299402607582,71.9927814895227,69.5059469876064,40.8557047163839,45.8355657450845,46.422013145242,22.1257231428597,30.0470156733205,55.3988263696644,25.2724606350377,35.9687412738722,25.3081351764298,43.6753533317035,36.1526497968085,55.5262840757659,47.0826980392618,41.4053293498428,36.4570796042998,51.6844307657637,72.1501842081887,73.0688163823994,77.6390965572237,50.9253112223196,58.0622406848582,29.3043618025117,35.9252136647681,43.7016843989125,44.1504295030559,56.5936336608545,42.0491566295103,40.5442864014951,60.137394373179,53.001403460688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| |||
|short_description=p1@SMAD4 | |||
}} |
Revision as of 17:41, 11 September 2013
Short description: | p1@SMAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SMAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342988, ENST00000544926, NM_005359, uc010xdp.1_5end |
EntrezGene: | SMAD4 |
HGNC: | 6770 |
UniProt: | Q13485Q9BYG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-21 | 114 |
nervous system | 5.51e-09 | 89 |
central nervous system | 9.90e-08 | 81 |
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