FFCP PHASE1:Hg19::chr18:55102628..55102646,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9480|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8139|TSSclassifier=W|UniProt=O95948|association_with_transcript=-270bp_to_ENST00000262095,ENST00000491143,NM_004852,uc002lgo.2_5end|description=CAGE_peak_2_at_ONECUT2_5end|id=chr18:55102628..55102646,+|ontology_enrichment_celltype=CL:0000181!1.57e-07!12;CL:0000417!1.57e-07!12;CL:0000668!1.57e-07!12;CL:0000414!1.57e-07!12;CL:0000412!1.57e-07!12;CL:0000182!1.57e-07!12;CL:0000066!4.16e-07!254|ontology_enrichment_celltype_v019=CL:0000182;1.68e-08;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.67e-08,12|ontology_enrichment_development_v019=UBERON:0009497;6.63e-10;13!UBERON:0004161;8.40e-10;11!UBERON:0008947;1.91e-07;29!UBERON:0001041;3.85e-07;30|ontology_enrichment_disease=DOID:0050687!7.52e-44!143;DOID:162!1.31e-43!235;DOID:14566!3.39e-42!239;DOID:305!3.02e-36!106;DOID:0050686!5.11e-15!137;DOID:299!9.50e-10!25;DOID:3095!2.69e-09!22;DOID:2994!2.69e-09!22;DOID:3119!2.51e-07!14|ontology_enrichment_disease_v019=DOID:305;8.62e-09;106!DOID:0050687;9.88e-07;143|ontology_enrichment_disease_v019_2=DOID:0050687,7.25e-26,143;DOID:162,3.74e-24,235;DOID:14566,4.29e-23,239;DOID:305,8.20e-22,106;DOID:0050686,5.45e-08,137|ontology_enrichment_uberon=UBERON:0001017!8.35e-18!82;UBERON:0000073!1.22e-17!94;UBERON:0001016!1.22e-17!94;UBERON:0005743!6.92e-17!86;UBERON:0000955!9.48e-16!69;UBERON:0006238!9.48e-16!69;UBERON:0001049!1.42e-13!57;UBERON:0005068!1.42e-13!57;UBERON:0006241!1.42e-13!57;UBERON:0007135!1.42e-13!57;UBERON:0003080!4.33e-13!42;UBERON:0001869!5.25e-13!32;UBERON:0002020!7.36e-13!34;UBERON:0003528!7.36e-13!34;UBERON:0002780!9.19e-13!41;UBERON:0001890!9.19e-13!41;UBERON:0006240!9.19e-13!41;UBERON:0001893!2.22e-12!34;UBERON:0002791!6.00e-12!33;UBERON:0002616!3.07e-11!59;UBERON:0001950!3.06e-10!20;UBERON:0002346!6.84e-10!90;UBERON:0002619!9.27e-10!22;UBERON:0003075!4.37e-09!86;UBERON:0007284!4.37e-09!86;UBERON:0000956!1.12e-08!25;UBERON:0000203!1.12e-08!25;UBERON:0009497!1.36e-08!25;UBERON:0000015!1.36e-08!25;UBERON:0002423!1.36e-08!25;UBERON:0006235!1.36e-08!25;UBERON:0004161!1.36e-08!25;UBERON:0004921!2.56e-08!129;UBERON:0004185!2.56e-08!129;UBERON:0001737!3.62e-08!9;UBERON:0001007!5.52e-08!155;UBERON:0001555!5.52e-08!155;UBERON:0007026!5.52e-08!155;UBERON:0000949!6.74e-08!45;UBERON:0003056!1.81e-07!61;UBERON:0001041!1.82e-07!98;UBERON:0007023!3.41e-07!115;UBERON:0000077!5.40e-07!130;UBERON:0007499!6.22e-07!25;UBERON:0004119!8.68e-07!169;UBERON:0000925!8.68e-07!169;UBERON:0006595!8.68e-07!169;UBERON:0008835!9.62e-07!22;UBERON:0003894!9.62e-07!22|ontology_enrichment_uberon_v019=UBERON:0001737;4.35e-12;9!UBERON:0001557;4.35e-12;9!UBERON:0002423;4.28e-11;25!UBERON:0001869;1.79e-10;32!UBERON:0003528;1.98e-10;34!UBERON:0002020;1.98e-10;34!UBERON:0002791;1.39e-09;32!UBERON:0001893;1.76e-09;34!UBERON:0002780;4.04e-09;41!UBERON:0001890;4.04e-09;41!UBERON:0000125;9.36e-09;9!UBERON:0002308;9.36e-09;9!UBERON:0001950;4.22e-08;20!UBERON:0000955;9.25e-08;68!UBERON:0001017;1.70e-07;75!UBERON:0002108;2.31e-07;4!UBERON:0002294;2.88e-07;7!UBERON:0001173;2.88e-07;7!UBERON:0009663;3.54e-07;7!UBERON:0002107;3.84e-07;19!UBERON:0006925;3.84e-07;19!UBERON:0002619;4.16e-07;22!UBERON:0000200;7.79e-07;6!UBERON:0001016;8.08e-07;83!UBERON:0000073;8.37e-07;53!UBERON:0002616;8.37e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.83e-17,223;UBERON:0000955,4.46e-13,68;UBERON:0006238,4.46e-13,68;UBERON:0001016,3.46e-12,89;UBERON:0001737,4.27e-12,9;UBERON:0002780,4.45e-12,41;UBERON:0001890,4.45e-12,41;UBERON:0003080,4.45e-12,41;UBERON:0006240,4.45e-12,41;UBERON:0003528,1.21e-11,34;UBERON:0002020,1.21e-11,34;UBERON:0000073,1.63e-11,53;UBERON:0002616,1.63e-11,53;UBERON:0001869,2.14e-11,32;UBERON:0009497,4.15e-11,25;UBERON:0000015,4.15e-11,25;UBERON:0002423,4.15e-11,25;UBERON:0006235,4.15e-11,25;UBERON:0004161,4.15e-11,25;UBERON:0001017,5.97e-11,81;UBERON:0001049,1.73e-10,56;UBERON:0005068,1.73e-10,56;UBERON:0006241,1.73e-10,56;UBERON:0007135,1.73e-10,56;UBERON:0001893,2.06e-10,34;UBERON:0002791,2.76e-10,32;UBERON:0000125,8.35e-09,9;UBERON:0002308,8.35e-09,9;UBERON:0008835,2.55e-08,22;UBERON:0003894,2.55e-08,22;UBERON:0001950,4.49e-08,20;UBERON:0007499,5.20e-08,25;UBERON:0009854,8.35e-08,23;UBERON:0003056,1.43e-07,61;UBERON:0009856,1.48e-07,26;UBERON:0002108,2.36e-07,4;UBERON:0004921,3.14e-07,118;UBERON:0009663,3.39e-07,7;UBERON:0002107,3.83e-07,19;UBERON:0006925,3.83e-07,19;UBERON:0008836,3.83e-07,19;UBERON:0002619,4.39e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8139 | |||
|TSSclassifier=W | |||
|UniProt=O95948 | |||
|association_with_transcript=-270bp_to_ENST00000262095,ENST00000491143,NM_004852,uc002lgo.2_5end | |||
|description=CAGE_peak_2_at_ONECUT2_5end | |||
|id=chr18:55102628..55102646,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.57e-07!12;CL:0000417!1.57e-07!12;CL:0000668!1.57e-07!12;CL:0000414!1.57e-07!12;CL:0000412!1.57e-07!12;CL:0000182!1.57e-07!12;CL:0000066!4.16e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.68e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.67e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.63e-10;13!UBERON:0004161;8.40e-10;11!UBERON:0008947;1.91e-07;29!UBERON:0001041;3.85e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!7.52e-44!143;DOID:162!1.31e-43!235;DOID:14566!3.39e-42!239;DOID:305!3.02e-36!106;DOID:0050686!5.11e-15!137;DOID:299!9.50e-10!25;DOID:3095!2.69e-09!22;DOID:2994!2.69e-09!22;DOID:3119!2.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:305;8.62e-09;106!DOID:0050687;9.88e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.25e-26,143;DOID:162,3.74e-24,235;DOID:14566,4.29e-23,239;DOID:305,8.20e-22,106;DOID:0050686,5.45e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.35e-18!82;UBERON:0000073!1.22e-17!94;UBERON:0001016!1.22e-17!94;UBERON:0005743!6.92e-17!86;UBERON:0000955!9.48e-16!69;UBERON:0006238!9.48e-16!69;UBERON:0001049!1.42e-13!57;UBERON:0005068!1.42e-13!57;UBERON:0006241!1.42e-13!57;UBERON:0007135!1.42e-13!57;UBERON:0003080!4.33e-13!42;UBERON:0001869!5.25e-13!32;UBERON:0002020!7.36e-13!34;UBERON:0003528!7.36e-13!34;UBERON:0002780!9.19e-13!41;UBERON:0001890!9.19e-13!41;UBERON:0006240!9.19e-13!41;UBERON:0001893!2.22e-12!34;UBERON:0002791!6.00e-12!33;UBERON:0002616!3.07e-11!59;UBERON:0001950!3.06e-10!20;UBERON:0002346!6.84e-10!90;UBERON:0002619!9.27e-10!22;UBERON:0003075!4.37e-09!86;UBERON:0007284!4.37e-09!86;UBERON:0000956!1.12e-08!25;UBERON:0000203!1.12e-08!25;UBERON:0009497!1.36e-08!25;UBERON:0000015!1.36e-08!25;UBERON:0002423!1.36e-08!25;UBERON:0006235!1.36e-08!25;UBERON:0004161!1.36e-08!25;UBERON:0004921!2.56e-08!129;UBERON:0004185!2.56e-08!129;UBERON:0001737!3.62e-08!9;UBERON:0001007!5.52e-08!155;UBERON:0001555!5.52e-08!155;UBERON:0007026!5.52e-08!155;UBERON:0000949!6.74e-08!45;UBERON:0003056!1.81e-07!61;UBERON:0001041!1.82e-07!98;UBERON:0007023!3.41e-07!115;UBERON:0000077!5.40e-07!130;UBERON:0007499!6.22e-07!25;UBERON:0004119!8.68e-07!169;UBERON:0000925!8.68e-07!169;UBERON:0006595!8.68e-07!169;UBERON:0008835!9.62e-07!22;UBERON:0003894!9.62e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.35e-12;9!UBERON:0001557;4.35e-12;9!UBERON:0002423;4.28e-11;25!UBERON:0001869;1.79e-10;32!UBERON:0003528;1.98e-10;34!UBERON:0002020;1.98e-10;34!UBERON:0002791;1.39e-09;32!UBERON:0001893;1.76e-09;34!UBERON:0002780;4.04e-09;41!UBERON:0001890;4.04e-09;41!UBERON:0000125;9.36e-09;9!UBERON:0002308;9.36e-09;9!UBERON:0001950;4.22e-08;20!UBERON:0000955;9.25e-08;68!UBERON:0001017;1.70e-07;75!UBERON:0002108;2.31e-07;4!UBERON:0002294;2.88e-07;7!UBERON:0001173;2.88e-07;7!UBERON:0009663;3.54e-07;7!UBERON:0002107;3.84e-07;19!UBERON:0006925;3.84e-07;19!UBERON:0002619;4.16e-07;22!UBERON:0000200;7.79e-07;6!UBERON:0001016;8.08e-07;83!UBERON:0000073;8.37e-07;53!UBERON:0002616;8.37e-07;53 | |||
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| |||
|short_description=p2@ONECUT2 | |||
}} |
Revision as of 17:48, 11 September 2013
Short description: | p2@ONECUT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ONECUT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -270bp_to_ENST00000262095, ENST00000491143, NM_004852, uc002lgo.2_5end |
EntrezGene: | ONECUT2 |
HGNC: | 8139 |
UniProt: | O95948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.67e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.25e-26 | 143 |
cancer | 3.74e-24 | 235 |
disease of cellular proliferation | 4.29e-23 | 239 |
carcinoma | 8.20e-22 | 106 |
organ system cancer | 5.45e-08 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.