FFCP PHASE1:Hg19::chr19:1855370..1855391,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:1855370..1855391,-|id=chr19:1855370..1855391,-|ontology_enrichment_celltype=CL:0000147!1.88e-08!14;CL:0000148!4.24e-08!10;CL:0000541!4.24e-08!10;CL:0002077!3.69e-07!33|ontology_enrichment_celltype_v019=CL:0000148;9.27e-17;10!CL:0000147;3.23e-14;14!CL:0000669;5.22e-09;4!CL:0002077;1.54e-08;34!CL:0002567;9.64e-08;3!CL:0002623;1.53e-07;3!CL:0000075;1.90e-07;27!CL:0000710;2.15e-07;20!CL:0000622;2.54e-07;5|ontology_enrichment_celltype_v019_2=CL:0000148,1.43e-17,10;CL:0000541,1.43e-17,10;CL:0000147,8.37e-15,14;CL:0002077,1.83e-09,34;CL:0000669,7.32e-09,4;CL:0002567,5.62e-08,3;CL:0000710,9.32e-08,20;CL:0000075,9.64e-08,27;CL:0002623,1.43e-07,3;CL:0000622,2.94e-07,5;CL:0000333,3.01e-07,41|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!8.27e-09!39;DOID:8692!1.21e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.866364470720326,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0,0.229240217243854,0,0.0787107813136792,0,0,0.619264493264304,0,0.90361775633475,0.369754010166788,0,0.284338464974843,0.587200878669695,0,0.200544447470142,0,0.447830948479849,1.6194683300949,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,1.94826728407911,0.334231370655521,0,0,0,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,1.45718115317017,0.370784442784429,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,2.58070378531837,1.04142150482278,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.732806975721629,1.31780417436063,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,1.15235184896,0.468642863667593,0.936480230490962,1.71141546463335,1.19558944441441,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0,0.226864366320042,0.538168907066586,0.427114777637135,0,1.50045548042201,0.824420233907511,0,0,0.337552664482532,0.389748020644795,0.504867548488229,0.828449087780694,0.969876340912871,0.710019185033229,0.503760491138201,0.339121184620975,0.193260853163297,0.818238361772504,0,1.21973706129595,0.530119073285941,2.20768491452085,1.7622379352613,0.756962552626885,1.09493207722749,0,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0.402115889646523,0.740707561268237,0,0,0,1.15930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,1.47730203652438,0.468008530278475,0.594524649154913,0,0,0.283550194484773,0.895585227028483,2.03443756959773,4.21720947081732,0.492663237895943,0.44024217006613,0.829312462163088,1.29707958075265,2.90357596880674,1.46045156871989,8.02175693672383,5.86087236050235,1.71072446022705,1.85089486865982,2.40274446275134,3.42991719156694,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,1.64648067356154,0,1.06617584622764,0.791951872933429,0,0,0.199945982364114,1.2162378064119,1.50677127429638,0,0,0,1.42636905040718,0,0.61642896765115,0.179060963239896,0.560425719967636,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0,0.260650843404249,1.56640925970192,2.05886054286514,0.206768026122887,0.215714200818617,0,0,0,0.907170879989041,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0,0.802025881213139,1.01289087829486,0,0,0.131124414959424,0,0.462092022626489,0.784349769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4130156178,0,0.103432995861895,0,0,0.129177819672012,1.05527014302958,0.112131862580613,0,0,0.653150243690884,2.05339980651169,0,0.143444410785353,0,0,0.106727345877715,0,0.269475606319761,0,0,0.406896178315738,0,0,0|short_description=p@chr19:1855370..1855391,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1855370..1855391,- | |||
|id=chr19:1855370..1855391,- | |||
|ontology_enrichment_celltype=CL:0000147!1.88e-08!14;CL:0000148!4.24e-08!10;CL:0000541!4.24e-08!10;CL:0002077!3.69e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.27e-17;10!CL:0000147;3.23e-14;14!CL:0000669;5.22e-09;4!CL:0002077;1.54e-08;34!CL:0002567;9.64e-08;3!CL:0002623;1.53e-07;3!CL:0000075;1.90e-07;27!CL:0000710;2.15e-07;20!CL:0000622;2.54e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.43e-17,10;CL:0000541,1.43e-17,10;CL:0000147,8.37e-15,14;CL:0002077,1.83e-09,34;CL:0000669,7.32e-09,4;CL:0002567,5.62e-08,3;CL:0000710,9.32e-08,20;CL:0000075,9.64e-08,27;CL:0002623,1.43e-07,3;CL:0000622,2.94e-07,5;CL:0000333,3.01e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!8.27e-09!39;DOID:8692!1.21e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.866364470720326,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0.410623275218653,0,0.229240217243854,0,0.0787107813136792,0,0,0.619264493264304,0,0.90361775633475,0.369754010166788,0,0.284338464974843,0.587200878669695,0,0.200544447470142,0,0.447830948479849,1.6194683300949,0.257575567634187,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,1.94826728407911,0.334231370655521,0,0,0,0.128091319725675,0,0.328875809207352,0,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,1.45718115317017,0.370784442784429,0.324547393654683,0.522389211897802,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,2.58070378531837,1.04142150482278,0,0,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0.81014194788176,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.732806975721629,1.31780417436063,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,1.15235184896,0.468642863667593,0.936480230490962,1.71141546463335,1.19558944441441,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0,0.226864366320042,0.538168907066586,0.427114777637135,0,1.50045548042201,0.824420233907511,0,0,0.337552664482532,0.389748020644795,0.504867548488229,0.828449087780694,0.969876340912871,0.710019185033229,0.503760491138201,0.339121184620975,0.193260853163297,0.818238361772504,0,1.21973706129595,0.530119073285941,2.20768491452085,1.7622379352613,0.756962552626885,1.09493207722749,0,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0.402115889646523,0.740707561268237,0,0,0,1.15930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,1.47730203652438,0.468008530278475,0.594524649154913,0,0,0.283550194484773,0.895585227028483,2.03443756959773,4.21720947081732,0.492663237895943,0.44024217006613,0.829312462163088,1.29707958075265,2.90357596880674,1.46045156871989,8.02175693672383,5.86087236050235,1.71072446022705,1.85089486865982,2.40274446275134,3.42991719156694,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,1.64648067356154,0,1.06617584622764,0.791951872933429,0,0,0.199945982364114,1.2162378064119,1.50677127429638,0,0,0,1.42636905040718,0,0.61642896765115,0.179060963239896,0.560425719967636,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0,0.260650843404249,1.56640925970192,2.05886054286514,0.206768026122887,0.215714200818617,0,0,0,0.907170879989041,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0,0.802025881213139,1.01289087829486,0,0,0.131124414959424,0,0.462092022626489,0.784349769176855,0,0.422206515571503,0,0.340187410553031,0.215915916102139,0,1.08378575017541,2.00675909541941,0,0,1.34324852833307,0,0,2.05160100093111,0.984043937099117,0.976135183992909,0,0,0,1.14853107599234,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0,1.07420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,1.06461206063404,0,0.18532421910392,0,0,0.316379424718726,0.571890581771475,1.79128453917934,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0.274537029736055,0.589062011728432,0.404364963146632,0,0,0,0.243713489631284,0,0.272999822815972,0,1.13008116620243,0,0,0,2.31510213706675,1.31178950409327,0,0.6196469961995,0.281695602532241,0.573645408816206,0.294747123039363,0,0,0,0,0.379473173765715,0.349934720244983,0.673554789078584,2.01090682660736,1.08890984861323,0.188287601553558,0.86101074534246,0,1.33029046061003,0.229723400206959,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,1.38871292465715,0,0.490080431962063,0.185803175125719,0.865615277858669,0.284567373393656,0.318852545457645,0.199579371432817,0.766021480529467,2.32840940996271,0,0.842391534340376,3.65175486453108,1.096759270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| |||
|short_description=p@chr19:1855370..1855391,- | |||
}} |
Revision as of 19:28, 11 September 2013
Short description: | p@chr19:1855370..1855391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:1855370..1855391, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.43e-17 | 10 |
melanoblast | 1.43e-17 | 10 |
pigment cell | 8.37e-15 | 14 |
ecto-epithelial cell | 1.83e-09 | 34 |
pericyte cell | 7.32e-09 | 4 |
light melanocyte | 5.62e-08 | 3 |
neurecto-epithelial cell | 9.32e-08 | 20 |
columnar/cuboidal epithelial cell | 9.64e-08 | 27 |
acinar cell of salivary gland | 1.43e-07 | 3 |
acinar cell | 2.94e-07 | 5 |
migratory neural crest cell | 3.01e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.