FFCP PHASE1:Hg19::chr19:18899427..18899432,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C240|description=CAGE_peak_at_chr19:18899427..18899432,-|id=chr19:18899427..18899432,-|ontology_enrichment_celltype=CL:0002615!1.24e-23!3;CL:0002580!1.24e-23!3;CL:0000135!2.86e-23!3;CL:0000386!2.86e-23!3;CL:0000388!2.86e-23!3;CL:0000136!6.79e-18!15;CL:0002617!1.27e-16!2;CL:0002334!1.16e-15!12;CL:0000153!2.21e-13!9;CL:0000447!2.21e-13!9;CL:0000499!9.46e-13!27;CL:0000057!4.22e-12!75;CL:0000667!8.84e-12!6;CL:0000058!8.84e-12!6;CL:0000138!8.84e-12!6;CL:0002579!6.61e-11!3;CL:0000325!1.07e-08!39;CL:0000327!1.17e-08!14;CL:0002566!2.22e-08!1;CL:0000630!4.13e-08!9;CL:0000055!2.15e-07!180|ontology_enrichment_celltype_v019=CL:0002617;3.49e-79;2!CL:0000136;4.39e-28;13!CL:0002580;1.31e-14;3!CL:0002615;1.60e-14;3|ontology_enrichment_celltype_v019_2=CL:0002617,3.49e-79,2;CL:0000136,1.78e-24,15;CL:0002580,1.40e-14,3;CL:0002615,1.60e-14,3|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3|ontology_enrichment_disease=DOID:4235!1.53e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.01e-31!6;UBERON:0002358!2.01e-31!6;UBERON:0003684!2.01e-31!6;UBERON:0001178!2.01e-31!6;UBERON:0000043!2.86e-23!3;UBERON:0004457!4.44e-22!12;UBERON:0000042!4.44e-22!12;UBERON:0000310!3.53e-19!10;UBERON:0001443!2.01e-17!11;UBERON:0000941!3.87e-09!1;UBERON:0004904!3.87e-09!1;UBERON:0002464!3.87e-09!1;UBERON:0001021!3.87e-09!1;UBERON:0001785!3.87e-09!1|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0000310;2.87e-36;10!UBERON:0001443;4.54e-33;11!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0003688;6.34e-08;6!UBERON:0002358;6.34e-08;6!UBERON:0003684;6.34e-08;6!UBERON:0001178;6.34e-08;6|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0000310,3.05e-36,10;UBERON:0001443,4.79e-33,11;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0003688,6.34e-08,6;UBERON:0002358,6.34e-08,6;UBERON:0003684,6.34e-08,6;UBERON:0001178,6.34e-08,6;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000915,1.15e-07,52|phase1_expression=1.2717486548939,3.42560838225573,0.704772020479856,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,3.36792113319688,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:18899427..18899432,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr19:18899427..18899432,- | |||
|id=chr19:18899427..18899432,- | |||
|ontology_enrichment_celltype=CL:0002615!1.24e-23!3;CL:0002580!1.24e-23!3;CL:0000135!2.86e-23!3;CL:0000386!2.86e-23!3;CL:0000388!2.86e-23!3;CL:0000136!6.79e-18!15;CL:0002617!1.27e-16!2;CL:0002334!1.16e-15!12;CL:0000153!2.21e-13!9;CL:0000447!2.21e-13!9;CL:0000499!9.46e-13!27;CL:0000057!4.22e-12!75;CL:0000667!8.84e-12!6;CL:0000058!8.84e-12!6;CL:0000138!8.84e-12!6;CL:0002579!6.61e-11!3;CL:0000325!1.07e-08!39;CL:0000327!1.17e-08!14;CL:0002566!2.22e-08!1;CL:0000630!4.13e-08!9;CL:0000055!2.15e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002617;3.49e-79;2!CL:0000136;4.39e-28;13!CL:0002580;1.31e-14;3!CL:0002615;1.60e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.49e-79,2;CL:0000136,1.78e-24,15;CL:0002580,1.40e-14,3;CL:0002615,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease=DOID:4235!1.53e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.01e-31!6;UBERON:0002358!2.01e-31!6;UBERON:0003684!2.01e-31!6;UBERON:0001178!2.01e-31!6;UBERON:0000043!2.86e-23!3;UBERON:0004457!4.44e-22!12;UBERON:0000042!4.44e-22!12;UBERON:0000310!3.53e-19!10;UBERON:0001443!2.01e-17!11;UBERON:0000941!3.87e-09!1;UBERON:0004904!3.87e-09!1;UBERON:0002464!3.87e-09!1;UBERON:0001021!3.87e-09!1;UBERON:0001785!3.87e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0000310;2.87e-36;10!UBERON:0001443;4.54e-33;11!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0003688;6.34e-08;6!UBERON:0002358;6.34e-08;6!UBERON:0003684;6.34e-08;6!UBERON:0001178;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.21e-40,1;UBERON:0001785,2.21e-40,1;UBERON:0002464,2.21e-40,1;UBERON:0004904,2.21e-40,1;UBERON:0001021,2.21e-40,1;UBERON:0003902,2.21e-40,1;UBERON:0005425,2.21e-40,1;UBERON:0000310,3.05e-36,10;UBERON:0001443,4.79e-33,11;UBERON:0003714,5.70e-21,2;UBERON:0005162,5.70e-21,2;UBERON:0000122,5.70e-21,2;UBERON:0001781,3.42e-11,4;UBERON:0003688,6.34e-08,6;UBERON:0002358,6.34e-08,6;UBERON:0003684,6.34e-08,6;UBERON:0001178,6.34e-08,6;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000915,1.15e-07,52 | |||
|phase1_expression=1.2717486548939,3.42560838225573,0.704772020479856,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,3.36792113319688,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:18899427..18899432,- | |||
}} |
Revision as of 19:32, 11 September 2013
Short description: | p@chr19:18899427..18899432, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18899427..18899432, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.49e-79 | 2 |
fat cell | 1.78e-24 | 15 |
preadipocyte of the breast | 1.40e-14 | 3 |
adipocyte of omentum tissue | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
breast | 3.05e-36 | 10 |
chest | 4.79e-33 | 11 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
layer of retina | 3.42e-11 | 4 |
omentum | 6.34e-08 | 6 |
peritoneum | 6.34e-08 | 6 |
abdominal cavity | 6.34e-08 | 6 |
visceral peritoneum | 6.34e-08 | 6 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
thoracic segment of trunk | 1.15e-07 | 52 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.