FFCP PHASE1:Hg19::chr19:47823066..47823077,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=728|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1338|TSSclassifier=S|UniProt=P21730|association_with_transcript=27bp_to_BT007358,CU679211,DQ891757,DQ894940,X57250_5end|coexpression_cluster_id=C107|description=CAGE_peak_6_at_C5AR1_5end|id=chr19:47823066..47823077,+|ontology_enrichment_celltype=CL:0002057!1.37e-97!42;CL:0000860!2.62e-90!45;CL:0000766!9.24e-90!76;CL:0002194!5.07e-81!63;CL:0000576!5.07e-81!63;CL:0000040!5.07e-81!63;CL:0000559!5.07e-81!63;CL:0002009!3.54e-78!65;CL:0000839!9.08e-72!70;CL:0000557!1.36e-70!71;CL:0000763!1.13e-56!112;CL:0000049!1.13e-56!112;CL:0000738!2.68e-48!140;CL:0002087!6.00e-43!119;CL:0002031!5.08e-37!124;CL:0000037!1.08e-36!172;CL:0000566!1.08e-36!172;CL:0002032!1.23e-35!165;CL:0000837!1.23e-35!165;CL:0000988!6.69e-34!182;CL:0000094!1.24e-16!8;CL:0002393!8.85e-13!9;CL:0002397!8.85e-13!9;CL:0000134!8.46e-12!358;CL:0000081!8.94e-12!11;CL:0002320!2.63e-11!365;CL:0000219!1.39e-09!390;CL:0000775!1.74e-09!3;CL:0000048!4.59e-08!430;CL:0000723!9.11e-08!436;CL:0000034!2.20e-07!444;CL:0000771!5.46e-07!2|ontology_enrichment_celltype_v019=CL:0000860;1.53e-123;33!CL:0002057;1.53e-123;33!CL:0000473;3.60e-96;39!CL:0000234;3.60e-96;39!CL:0000576;2.74e-57;48!CL:0000766;1.83e-38;69!CL:0000763;1.79e-24;100!CL:0000094;7.75e-18;8!CL:0002087;7.17e-15;104!CL:0000738;3.70e-13;136!CL:0000081;6.50e-13;11!CL:0000771;2.10e-12;2!CL:0000775;5.29e-09;3!CL:0000219;1.22e-07;193!CL:0000988;3.35e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-106,42;CL:0002057,3.10e-106,42;CL:0000473,8.84e-106,48;CL:0000234,8.84e-106,48;CL:0000766,2.39e-93,72;CL:0002194,1.79e-83,59;CL:0000576,1.79e-83,59;CL:0000040,1.79e-83,59;CL:0000559,1.79e-83,59;CL:0002009,1.35e-80,61;CL:0000839,3.78e-74,66;CL:0000557,5.67e-73,67;CL:0000763,1.54e-60,108;CL:0000049,1.54e-60,108;CL:0000738,6.32e-47,136;CL:0002087,2.39e-40,115;CL:0002032,9.74e-39,161;CL:0000837,9.74e-39,161;CL:0002031,1.96e-38,120;CL:0000037,7.05e-37,168;CL:0000988,1.06e-34,177;CL:0000094,8.04e-18,8;CL:0000134,3.05e-14,354;CL:0002320,7.68e-14,361;CL:0000081,6.67e-13,11;CL:0000771,1.67e-12,2;CL:0000219,1.99e-12,386;CL:0000048,1.07e-10,427;CL:0000723,1.85e-10,433;CL:0000034,3.77e-10,441;CL:0000775,5.29e-09,3|ontology_enrichment_development_v019=CL:0002057;4.12e-81;42!CL:0000049;1.28e-20;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.83e-65!102;UBERON:0003061!6.83e-65!102;UBERON:0002371!2.51e-61!80;UBERON:0002193!2.21e-60!112;UBERON:0001474!3.23e-56!86;UBERON:0004765!4.43e-46!101;UBERON:0001434!4.43e-46!101;UBERON:0002405!7.03e-45!115;UBERON:0003081!7.59e-26!216;UBERON:0002204!1.48e-25!167;UBERON:0002384!2.65e-11!375;UBERON:0000926!1.06e-09!448;UBERON:0004120!1.06e-09!448;UBERON:0006603!1.06e-09!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.18e-64,76;UBERON:0001474,9.87e-59,82;UBERON:0004765,4.71e-53,90;UBERON:0002405,3.58e-51,93;UBERON:0002390,2.72e-48,98;UBERON:0003061,2.72e-48,98;UBERON:0001434,3.22e-47,100;UBERON:0002193,2.55e-43,108;UBERON:0002204,5.23e-26,167;UBERON:0003081,2.37e-20,203;UBERON:0002384,2.71e-13,371;UBERON:0000926,5.79e-11,315;UBERON:0004120,5.79e-11,315;UBERON:0006603,5.79e-11,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0.447830948479849,0.647787332037959,0,2.03557534291391,4.1566353805769,2.18325655069035,5.57829688573643,4.11167888021826,2.47765096716083,2.01384674625505,2.56160706529101,1.18241114944293,2.41321976515633,1.93645405075148,2.70852973188684,5.27078550719293,7.09555990150399,1.57306439111559,4.89734227793444,3.85114832491312,1.91801137739712,2.63881040149373,3.59034583718937,0.426224750532694,2.90209238628584,2.26954089876456,1.24564449799115,3.01498398308092,1.5644487552606,1.52032191293582,4.23779651843358,1.84138817993782,1.26584954976354,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.48217676009124,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,8.97484377612075,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=728 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1338 | |||
|TSSclassifier=S | |||
|UniProt=P21730 | |||
|association_with_transcript=27bp_to_BT007358,CU679211,DQ891757,DQ894940,X57250_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_6_at_C5AR1_5end | |||
|id=chr19:47823066..47823077,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-97!42;CL:0000860!2.62e-90!45;CL:0000766!9.24e-90!76;CL:0002194!5.07e-81!63;CL:0000576!5.07e-81!63;CL:0000040!5.07e-81!63;CL:0000559!5.07e-81!63;CL:0002009!3.54e-78!65;CL:0000839!9.08e-72!70;CL:0000557!1.36e-70!71;CL:0000763!1.13e-56!112;CL:0000049!1.13e-56!112;CL:0000738!2.68e-48!140;CL:0002087!6.00e-43!119;CL:0002031!5.08e-37!124;CL:0000037!1.08e-36!172;CL:0000566!1.08e-36!172;CL:0002032!1.23e-35!165;CL:0000837!1.23e-35!165;CL:0000988!6.69e-34!182;CL:0000094!1.24e-16!8;CL:0002393!8.85e-13!9;CL:0002397!8.85e-13!9;CL:0000134!8.46e-12!358;CL:0000081!8.94e-12!11;CL:0002320!2.63e-11!365;CL:0000219!1.39e-09!390;CL:0000775!1.74e-09!3;CL:0000048!4.59e-08!430;CL:0000723!9.11e-08!436;CL:0000034!2.20e-07!444;CL:0000771!5.46e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-123;33!CL:0002057;1.53e-123;33!CL:0000473;3.60e-96;39!CL:0000234;3.60e-96;39!CL:0000576;2.74e-57;48!CL:0000766;1.83e-38;69!CL:0000763;1.79e-24;100!CL:0000094;7.75e-18;8!CL:0002087;7.17e-15;104!CL:0000738;3.70e-13;136!CL:0000081;6.50e-13;11!CL:0000771;2.10e-12;2!CL:0000775;5.29e-09;3!CL:0000219;1.22e-07;193!CL:0000988;3.35e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-106,42;CL:0002057,3.10e-106,42;CL:0000473,8.84e-106,48;CL:0000234,8.84e-106,48;CL:0000766,2.39e-93,72;CL:0002194,1.79e-83,59;CL:0000576,1.79e-83,59;CL:0000040,1.79e-83,59;CL:0000559,1.79e-83,59;CL:0002009,1.35e-80,61;CL:0000839,3.78e-74,66;CL:0000557,5.67e-73,67;CL:0000763,1.54e-60,108;CL:0000049,1.54e-60,108;CL:0000738,6.32e-47,136;CL:0002087,2.39e-40,115;CL:0002032,9.74e-39,161;CL:0000837,9.74e-39,161;CL:0002031,1.96e-38,120;CL:0000037,7.05e-37,168;CL:0000988,1.06e-34,177;CL:0000094,8.04e-18,8;CL:0000134,3.05e-14,354;CL:0002320,7.68e-14,361;CL:0000081,6.67e-13,11;CL:0000771,1.67e-12,2;CL:0000219,1.99e-12,386;CL:0000048,1.07e-10,427;CL:0000723,1.85e-10,433;CL:0000034,3.77e-10,441;CL:0000775,5.29e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-81;42!CL:0000049;1.28e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.83e-65!102;UBERON:0003061!6.83e-65!102;UBERON:0002371!2.51e-61!80;UBERON:0002193!2.21e-60!112;UBERON:0001474!3.23e-56!86;UBERON:0004765!4.43e-46!101;UBERON:0001434!4.43e-46!101;UBERON:0002405!7.03e-45!115;UBERON:0003081!7.59e-26!216;UBERON:0002204!1.48e-25!167;UBERON:0002384!2.65e-11!375;UBERON:0000926!1.06e-09!448;UBERON:0004120!1.06e-09!448;UBERON:0006603!1.06e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.18e-64,76;UBERON:0001474,9.87e-59,82;UBERON:0004765,4.71e-53,90;UBERON:0002405,3.58e-51,93;UBERON:0002390,2.72e-48,98;UBERON:0003061,2.72e-48,98;UBERON:0001434,3.22e-47,100;UBERON:0002193,2.55e-43,108;UBERON:0002204,5.23e-26,167;UBERON:0003081,2.37e-20,203;UBERON:0002384,2.71e-13,371;UBERON:0000926,5.79e-11,315;UBERON:0004120,5.79e-11,315;UBERON:0006603,5.79e-11,315 | |||
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|short_description=p6@C5AR1 | |||
}} |
Revision as of 21:30, 11 September 2013
Short description: | p6@C5AR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_C5AR1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 27bp_to_BT007358, CU679211, DQ891757, DQ894940, X57250_5end |
EntrezGene: | C5AR1 |
HGNC: | 1338 |
UniProt: | P21730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.10e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-106 | 42 |
defensive cell | 8.84e-106 | 48 |
phagocyte | 8.84e-106 | 48 |
myeloid leukocyte | 2.39e-93 | 72 |
monopoietic cell | 1.79e-83 | 59 |
monocyte | 1.79e-83 | 59 |
monoblast | 1.79e-83 | 59 |
promonocyte | 1.79e-83 | 59 |
macrophage dendritic cell progenitor | 1.35e-80 | 61 |
myeloid lineage restricted progenitor cell | 3.78e-74 | 66 |
granulocyte monocyte progenitor cell | 5.67e-73 | 67 |
myeloid cell | 1.54e-60 | 108 |
common myeloid progenitor | 1.54e-60 | 108 |
leukocyte | 6.32e-47 | 136 |
nongranular leukocyte | 2.39e-40 | 115 |
hematopoietic oligopotent progenitor cell | 9.74e-39 | 161 |
hematopoietic multipotent progenitor cell | 9.74e-39 | 161 |
hematopoietic lineage restricted progenitor cell | 1.96e-38 | 120 |
hematopoietic stem cell | 7.05e-37 | 168 |
hematopoietic cell | 1.06e-34 | 177 |
granulocyte | 8.04e-18 | 8 |
mesenchymal cell | 3.05e-14 | 354 |
connective tissue cell | 7.68e-14 | 361 |
blood cell | 6.67e-13 | 11 |
eosinophil | 1.67e-12 | 2 |
motile cell | 1.99e-12 | 386 |
multi fate stem cell | 1.07e-10 | 427 |
somatic stem cell | 1.85e-10 | 433 |
stem cell | 3.77e-10 | 441 |
neutrophil | 5.29e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.18e-64 | 76 |
bone element | 9.87e-59 | 82 |
skeletal element | 4.71e-53 | 90 |
immune system | 3.58e-51 | 93 |
hematopoietic system | 2.72e-48 | 98 |
blood island | 2.72e-48 | 98 |
skeletal system | 3.22e-47 | 100 |
hemolymphoid system | 2.55e-43 | 108 |
musculoskeletal system | 5.23e-26 | 167 |
lateral plate mesoderm | 2.37e-20 | 203 |
connective tissue | 2.71e-13 | 371 |
mesoderm | 5.79e-11 | 315 |
mesoderm-derived structure | 5.79e-11 | 315 |
presumptive mesoderm | 5.79e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.