FFCP PHASE1:Hg19::chr2:16082094..16082106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4613|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=7559|TSSclassifier=S|UniProt=|association_with_transcript=48bp_to_uc010yjr.1_5end|coexpression_cluster_id=C135|description=CAGE_peak_7_at_MYCN_5end|id=chr2:16082094..16082106,+|ontology_enrichment_celltype=CL:0000039!8.27e-22!7;CL:0000586!8.27e-22!7;CL:0000540!1.47e-11!6;CL:0000031!1.47e-11!6;CL:0000404!1.47e-11!6;CL:0002253!5.12e-09!2;CL:0000047!1.11e-08!8;CL:0000133!1.47e-07!59|ontology_enrichment_celltype_v019=CL:0000333;1.49e-40;5!CL:0000039;1.39e-28;7!CL:0000586;1.39e-28;7!CL:0002321;4.72e-14;15|ontology_enrichment_celltype_v019_2=CL:0000039,1.60e-28,7;CL:0000586,1.60e-28,7;CL:0000333,1.14e-08,41|ontology_enrichment_development_v019=UBERON:0009117;2.94e-20;10!UBERON:0005564;2.94e-20;10!UBERON:0003056;1.12e-08;3|ontology_enrichment_disease=DOID:3095!9.41e-22!22;DOID:2994!9.41e-22!22;DOID:169!2.11e-07!6;DOID:0050687!4.70e-07!143|ontology_enrichment_disease_v019=DOID:3095;6.81e-36;22!DOID:2994;6.81e-36;22!DOID:169;6.00e-34;6!DOID:171;1.05e-20;10|ontology_enrichment_disease_v019_2=DOID:3095,7.47e-36,22;DOID:2994,7.47e-36,22;DOID:169,6.01e-34,6;DOID:171,1.05e-20,10;DOID:0050687,2.08e-07,143;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239|ontology_enrichment_uberon=UBERON:0000473!3.96e-13!8;UBERON:0003135!1.83e-09!11;UBERON:0000991!7.30e-09!21;UBERON:0009196!7.30e-09!21;UBERON:0009117!7.30e-09!21;UBERON:0005564!7.30e-09!21;UBERON:0000013!8.20e-09!5;UBERON:0002410!8.20e-09!5;UBERON:0004176!2.04e-08!22|ontology_enrichment_uberon_v019=UBERON:0000013;1.49e-40;5!UBERON:0002410;1.49e-40;5!UBERON:0000473;4.07e-25;8!UBERON:0000010;6.45e-23;8!UBERON:0003135;1.73e-18;11!UBERON:0000991;5.11e-10;21!UBERON:0003101;1.36e-09;22!UBERON:0000079;1.36e-09;22|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.49e-40,5;UBERON:0002410,1.49e-40,5;UBERON:0000473,4.60e-25,8;UBERON:0000010,6.45e-23,8;UBERON:0003135,1.90e-18,11;UBERON:0000991,5.35e-10,21;UBERON:0009196,5.35e-10,21;UBERON:0009117,5.35e-10,21;UBERON:0005564,5.35e-10,21;UBERON:0004176,1.43e-09,22;UBERON:0003101,1.43e-09,22;UBERON:0000079,1.43e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,17.9266554085562,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.987334088507493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3925504294107,6.68513830659427,0,43.4654360004215,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,0.203977659483963,1.06886962106224,1.10273879441814,1.25353769646188,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p7@MYCN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7559 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=48bp_to_uc010yjr.1_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_7_at_MYCN_5end | |||
|id=chr2:16082094..16082106,+ | |||
|ontology_enrichment_celltype=CL:0000039!8.27e-22!7;CL:0000586!8.27e-22!7;CL:0000540!1.47e-11!6;CL:0000031!1.47e-11!6;CL:0000404!1.47e-11!6;CL:0002253!5.12e-09!2;CL:0000047!1.11e-08!8;CL:0000133!1.47e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.49e-40;5!CL:0000039;1.39e-28;7!CL:0000586;1.39e-28;7!CL:0002321;4.72e-14;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.60e-28,7;CL:0000586,1.60e-28,7;CL:0000333,1.14e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.94e-20;10!UBERON:0005564;2.94e-20;10!UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!9.41e-22!22;DOID:2994!9.41e-22!22;DOID:169!2.11e-07!6;DOID:0050687!4.70e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.81e-36;22!DOID:2994;6.81e-36;22!DOID:169;6.00e-34;6!DOID:171;1.05e-20;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.47e-36,22;DOID:2994,7.47e-36,22;DOID:169,6.01e-34,6;DOID:171,1.05e-20,10;DOID:0050687,2.08e-07,143;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.96e-13!8;UBERON:0003135!1.83e-09!11;UBERON:0000991!7.30e-09!21;UBERON:0009196!7.30e-09!21;UBERON:0009117!7.30e-09!21;UBERON:0005564!7.30e-09!21;UBERON:0000013!8.20e-09!5;UBERON:0002410!8.20e-09!5;UBERON:0004176!2.04e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.49e-40;5!UBERON:0002410;1.49e-40;5!UBERON:0000473;4.07e-25;8!UBERON:0000010;6.45e-23;8!UBERON:0003135;1.73e-18;11!UBERON:0000991;5.11e-10;21!UBERON:0003101;1.36e-09;22!UBERON:0000079;1.36e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.49e-40,5;UBERON:0002410,1.49e-40,5;UBERON:0000473,4.60e-25,8;UBERON:0000010,6.45e-23,8;UBERON:0003135,1.90e-18,11;UBERON:0000991,5.35e-10,21;UBERON:0009196,5.35e-10,21;UBERON:0009117,5.35e-10,21;UBERON:0005564,5.35e-10,21;UBERON:0004176,1.43e-09,22;UBERON:0003101,1.43e-09,22;UBERON:0000079,1.43e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,17.9266554085562,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.987334088507493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3925504294107,6.68513830659427,0,43.4654360004215,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,0.203977659483963,1.06886962106224,1.10273879441814,1.25353769646188,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p7@MYCN | |||
}} |
Revision as of 14:18, 12 September 2013
Short description: | p7@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 48bp_to_uc010yjr.1_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.60e-28 | 7 |
germ cell | 1.60e-28 | 7 |
migratory neural crest cell | 1.14e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.49e-40 | 5 |
autonomic nervous system | 1.49e-40 | 5 |
testis | 4.60e-25 | 8 |
peripheral nervous system | 6.45e-23 | 8 |
male reproductive organ | 1.90e-18 | 11 |
gonad | 5.35e-10 | 21 |
indifferent external genitalia | 5.35e-10 | 21 |
indifferent gonad | 5.35e-10 | 21 |
gonad primordium | 5.35e-10 | 21 |
external genitalia | 1.43e-09 | 22 |
male organism | 1.43e-09 | 22 |
male reproductive system | 1.43e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.47e-36 | 22 |
germ cell cancer | 7.47e-36 | 22 |
neuroendocrine tumor | 6.01e-34 | 6 |
neuroectodermal tumor | 1.05e-20 | 10 |
cell type cancer | 2.08e-07 | 143 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.