FFCP PHASE1:Hg19::chr2:113033617..113033657,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3726|description=CAGE_peak_at_chr2:113033617..113033657,-|id=chr2:113033617..113033657,-|ontology_enrichment_celltype=CL:0000738!6.71e-21!140;CL:0000037!5.50e-18!172;CL:0000566!5.50e-18!172;CL:0000988!1.10e-16!182;CL:0002031!1.31e-16!124;CL:0002087!3.49e-16!119;CL:0002032!1.30e-15!165;CL:0000837!1.30e-15!165;CL:0000034!1.32e-14!444;CL:0000723!2.40e-13!436;CL:0000134!4.83e-13!358;CL:0000048!4.89e-13!430;CL:0002320!5.85e-13!365;CL:0002057!9.55e-12!42;CL:0000860!4.48e-11!45;CL:0000219!5.16e-11!390;CL:0000838!4.47e-10!52;CL:0000542!1.51e-09!53;CL:0000051!1.51e-09!53;CL:0000766!9.76e-09!76;CL:0000557!2.87e-08!71;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112;CL:0002393!2.63e-07!9;CL:0002397!2.63e-07!9;CL:0002009!3.74e-07!65;CL:0000003!4.72e-07!722;CL:0000791!6.44e-07!18;CL:0000789!6.44e-07!18;CL:0002420!6.44e-07!18;CL:0002419!6.44e-07!18;CL:0000790!6.44e-07!18;CL:0000839!8.31e-07!70;CL:0000236!9.17e-07!14|ontology_enrichment_celltype_v019=CL:0000791;2.90e-13;18!CL:0000789;2.90e-13;18!CL:0002419;2.90e-13;18!CL:0000624;2.81e-12;6!CL:0000236;5.56e-12;13!CL:0002393;1.66e-11;6!CL:0002397;1.66e-11;6!CL:0000542;4.52e-11;53!CL:0000084;4.93e-10;25!CL:0000766;1.38e-09;69!CL:0002087;2.40e-08;104!CL:0000738;4.77e-08;136!CL:0000094;5.24e-08;8!CL:0000576;1.22e-07;48!CL:0000623;3.42e-07;3!CL:0000898;5.28e-07;3!CL:0000784;8.48e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,4.45e-40,136;CL:0000037,1.16e-33,168;CL:0000988,6.47e-31,177;CL:0002031,1.39e-29,120;CL:0002087,4.58e-29,115;CL:0002032,9.57e-28,161;CL:0000837,9.57e-28,161;CL:0000838,2.25e-17,52;CL:0000542,6.79e-17,53;CL:0000051,6.79e-17,53;CL:0000766,2.06e-16,72;CL:0002393,5.69e-16,9;CL:0002397,5.69e-16,9;CL:0000860,2.76e-15,42;CL:0002057,2.76e-15,42;CL:0000134,2.23e-14,354;CL:0000557,3.15e-14,67;CL:0002320,1.12e-13,361;CL:0000791,2.61e-13,18;CL:0000789,2.61e-13,18;CL:0002420,2.61e-13,18;CL:0002419,2.61e-13,18;CL:0000790,2.61e-13,18;CL:0000473,1.45e-12,48;CL:0000234,1.45e-12,48;CL:0000034,1.71e-12,441;CL:0000624,2.68e-12,6;CL:0000763,5.05e-12,108;CL:0000049,5.05e-12,108;CL:0000219,9.37e-12,386;CL:0002009,1.23e-11,61;CL:0000723,2.87e-11,433;CL:0000048,3.05e-11,427;CL:0000236,4.08e-11,14;CL:0000839,5.32e-11,66;CL:0000084,5.51e-10,25;CL:0000827,5.51e-10,25;CL:0002194,6.19e-10,59;CL:0000576,6.19e-10,59;CL:0000040,6.19e-10,59;CL:0000559,6.19e-10,59;CL:0000094,5.34e-08,8;CL:0000623,3.51e-07,3;CL:0000825,3.51e-07,3;CL:0000898,5.16e-07,3;CL:0000784,8.60e-07,3|ontology_enrichment_development_v019=CL:0000790;2.90e-13;18!CL:0002057;1.67e-11;42!CL:0000051;4.52e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.44e-12!375;UBERON:0002390!2.05e-07!102;UBERON:0003061!2.05e-07!102;UBERON:0002371!2.24e-07!80;UBERON:0001474!3.09e-07!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.22e-13,76;UBERON:0002384,1.01e-12,371;UBERON:0002390,1.45e-12,98;UBERON:0003061,1.45e-12,98;UBERON:0001474,3.14e-11,82;UBERON:0002193,1.58e-10,108;UBERON:0002405,6.63e-10,93;UBERON:0004765,1.58e-09,90;UBERON:0001434,8.13e-08,100;UBERON:0003081,5.66e-07,203|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,1.25381888591235,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,7.86728553697808,6.52509976765262,6.03782880932696,0,0,0.739508020333575,0.232401601740905,0.426507697462265,15.8544237240817,13.2958898047651,9.6261334785668,11.0675544065084,0,0,0,0.872389432677388,0,0.485168122375632,1.39457422143411,1.23350366406548,0.619412741790207,0.28769239232215,0.768482119587302,2.12834006899727,1.03423704220986,0.645484683583826,2.70852973188684,1.31769637679823,0,1.57306439111559,0.612167784741805,0.641858054152187,1.91801137739712,0,0.598390972864896,0,0.580418477257168,0,1.24564449799115,0.251248665256743,0.521482918420201,1.08594422352558,0,0.736555271975129,2.21523671208619,6.76016916198214,4.46469029926591,8.17668717482666,10.2219054343311,4.6554836780867,3.69668849403284,7.98035682475496,3.58050018958362,3.65328307529268,5.27988733383968,2.73069305631066,0.889509253863555,6.40095333849761,4.80475184443215,6.32227683949932,1.98313461835459,4.77026877267682,5.69212969109448,5.87237189370939,6.49864487812889,30.3994055731759,7.28661131875997,4.47752944117631,8.85193965512249,18.0784950864616,17.8873304129573,1.33749196312542,22.8145586643513,25.0927337039409,11.6896037044747,1.11410456885174,8.83817722424511,9.52595746709571,8.12411591295047,1.66518715643378,1.95089021339817,0.328875809207352,2.48715016007264,1.44901542867526,10.5283459845063,5.88589821797369,6.27213142829861,0.453237370790265,19.9274656672999,13.7450978193052,6.578511992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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3726 | |||
|description=CAGE_peak_at_chr2:113033617..113033657,- | |||
|id=chr2:113033617..113033657,- | |||
|ontology_enrichment_celltype=CL:0000738!6.71e-21!140;CL:0000037!5.50e-18!172;CL:0000566!5.50e-18!172;CL:0000988!1.10e-16!182;CL:0002031!1.31e-16!124;CL:0002087!3.49e-16!119;CL:0002032!1.30e-15!165;CL:0000837!1.30e-15!165;CL:0000034!1.32e-14!444;CL:0000723!2.40e-13!436;CL:0000134!4.83e-13!358;CL:0000048!4.89e-13!430;CL:0002320!5.85e-13!365;CL:0002057!9.55e-12!42;CL:0000860!4.48e-11!45;CL:0000219!5.16e-11!390;CL:0000838!4.47e-10!52;CL:0000542!1.51e-09!53;CL:0000051!1.51e-09!53;CL:0000766!9.76e-09!76;CL:0000557!2.87e-08!71;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112;CL:0002393!2.63e-07!9;CL:0002397!2.63e-07!9;CL:0002009!3.74e-07!65;CL:0000003!4.72e-07!722;CL:0000791!6.44e-07!18;CL:0000789!6.44e-07!18;CL:0002420!6.44e-07!18;CL:0002419!6.44e-07!18;CL:0000790!6.44e-07!18;CL:0000839!8.31e-07!70;CL:0000236!9.17e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.90e-13;18!CL:0000789;2.90e-13;18!CL:0002419;2.90e-13;18!CL:0000624;2.81e-12;6!CL:0000236;5.56e-12;13!CL:0002393;1.66e-11;6!CL:0002397;1.66e-11;6!CL:0000542;4.52e-11;53!CL:0000084;4.93e-10;25!CL:0000766;1.38e-09;69!CL:0002087;2.40e-08;104!CL:0000738;4.77e-08;136!CL:0000094;5.24e-08;8!CL:0000576;1.22e-07;48!CL:0000623;3.42e-07;3!CL:0000898;5.28e-07;3!CL:0000784;8.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.45e-40,136;CL:0000037,1.16e-33,168;CL:0000988,6.47e-31,177;CL:0002031,1.39e-29,120;CL:0002087,4.58e-29,115;CL:0002032,9.57e-28,161;CL:0000837,9.57e-28,161;CL:0000838,2.25e-17,52;CL:0000542,6.79e-17,53;CL:0000051,6.79e-17,53;CL:0000766,2.06e-16,72;CL:0002393,5.69e-16,9;CL:0002397,5.69e-16,9;CL:0000860,2.76e-15,42;CL:0002057,2.76e-15,42;CL:0000134,2.23e-14,354;CL:0000557,3.15e-14,67;CL:0002320,1.12e-13,361;CL:0000791,2.61e-13,18;CL:0000789,2.61e-13,18;CL:0002420,2.61e-13,18;CL:0002419,2.61e-13,18;CL:0000790,2.61e-13,18;CL:0000473,1.45e-12,48;CL:0000234,1.45e-12,48;CL:0000034,1.71e-12,441;CL:0000624,2.68e-12,6;CL:0000763,5.05e-12,108;CL:0000049,5.05e-12,108;CL:0000219,9.37e-12,386;CL:0002009,1.23e-11,61;CL:0000723,2.87e-11,433;CL:0000048,3.05e-11,427;CL:0000236,4.08e-11,14;CL:0000839,5.32e-11,66;CL:0000084,5.51e-10,25;CL:0000827,5.51e-10,25;CL:0002194,6.19e-10,59;CL:0000576,6.19e-10,59;CL:0000040,6.19e-10,59;CL:0000559,6.19e-10,59;CL:0000094,5.34e-08,8;CL:0000623,3.51e-07,3;CL:0000825,3.51e-07,3;CL:0000898,5.16e-07,3;CL:0000784,8.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-13;18!CL:0002057;1.67e-11;42!CL:0000051;4.52e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.44e-12!375;UBERON:0002390!2.05e-07!102;UBERON:0003061!2.05e-07!102;UBERON:0002371!2.24e-07!80;UBERON:0001474!3.09e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.22e-13,76;UBERON:0002384,1.01e-12,371;UBERON:0002390,1.45e-12,98;UBERON:0003061,1.45e-12,98;UBERON:0001474,3.14e-11,82;UBERON:0002193,1.58e-10,108;UBERON:0002405,6.63e-10,93;UBERON:0004765,1.58e-09,90;UBERON:0001434,8.13e-08,100;UBERON:0003081,5.66e-07,203 | |||
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| |||
|short_description=p@chr2:113033617..113033657,- | |||
}} |
Revision as of 12:59, 12 September 2013
Short description: | p@chr2:113033617..113033657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113033617..113033657, - |
Coexpression cluster: | C3726_CD34_CD4_Natural_CD14_CD8_CD133_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.22e-13 | 76 |
connective tissue | 1.01e-12 | 371 |
hematopoietic system | 1.45e-12 | 98 |
blood island | 1.45e-12 | 98 |
bone element | 3.14e-11 | 82 |
hemolymphoid system | 1.58e-10 | 108 |
immune system | 6.63e-10 | 93 |
skeletal element | 1.58e-09 | 90 |
skeletal system | 8.13e-08 | 100 |
lateral plate mesoderm | 5.66e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.