FFCP PHASE1:Hg19::chr20:5093761..5093764,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29058|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15876|TSSclassifier=S|UniProt=Q96A57|association_with_transcript=-12bp_to_ENST00000202834_5end|description=CAGE_peak_7_at_C20orf30_5end|id=chr20:5093761..5093764,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002579;5.22e-08;3|ontology_enrichment_celltype_v019_2=CL:0002579,1.39e-07,3|ontology_enrichment_development_v019=UBERON:0000358;4.43e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.65e-08;3!DOID:127;2.65e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,3.19e-08,3;DOID:127,3.19e-08,3;DOID:3369,7.19e-07,1|ontology_enrichment_uberon=UBERON:0000073!5.22e-08!94;UBERON:0001016!5.22e-08!94;UBERON:0000119!1.17e-07!312;UBERON:0000475!1.50e-07!365;UBERON:0000483!1.87e-07!309;UBERON:0005743!4.44e-07!86;UBERON:0001017!6.08e-07!82|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.49e-07,1;UBERON:0001785,8.49e-07,1;UBERON:0002464,8.49e-07,1;UBERON:0004904,8.49e-07,1;UBERON:0001021,8.49e-07,1;UBERON:0003902,8.49e-07,1;UBERON:0005425,8.49e-07,1;UBERON:0002146,9.48e-07,1;UBERON:0005623,9.48e-07,1|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,0,0,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0.730310090387373,0.975865597581014,0.861847406537515,0.816002764977012,0.313454721478088,0.286235987131057,0,0.125542639594803,0.305653622991805,0.328402357799783,0.314843125254717,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0,0,0.289803085735052,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.264818361626438,0,1.06400514659507,0,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0,0.605429710579726,0,0.70296429550139,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0.61246251376468,0.245668634623536,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0.841680569770331,0,0,0,0.30648779579902,0.600952235626387,0.226864366320042,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0,0.337552664482532,0.584622030967192,0.252433774244115,0.552299391853796,0.161646056818812,0,0.403008392910561,0.339121184620975,0.386521706326594,0.545492241181669,0.573609190778008,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0.464367928031979,0,0,0.674338760312407,0.241011029883482,0.110293972732394,0,0.71181185733329,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.491953754172454,0.686271241194102,0.329250856225877,1.1240175325762,0.100528972411631,0,0,1.03993478527958,0,0,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0.176096868026452,0.207328115540772,0,0.37872730027914,0.317489471460845,0.763976851116555,0,0,0.205654985406647,0,0,0.224262168690721,0.43596006883328,0.2933531432838,0.646358578788889,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0,0,0,2.10833939483032,0,0,0,0.868687840005475,0,0,0,0,0.431255149719035,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.207970861530807,0.178428988797162,0.788512075169673,0,0,0,0,0.664225598535437,0,0.434418072340414,0.391602314925481,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,1.24053903909388,0.153461973288062,0.841980283299221,1.02511319404561,1.02341449813341,0.965123526861645,0,0.462629081407967,0.532685175939381,0.739144404124282,0,0.348631135379878,0.241718899183244,0.802025881213139,0.552485933615378,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0.831076008928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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15876 | |||
|TSSclassifier=S | |||
|UniProt=Q96A57 | |||
|association_with_transcript=-12bp_to_ENST00000202834_5end | |||
|description=CAGE_peak_7_at_C20orf30_5end | |||
|id=chr20:5093761..5093764,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;5.22e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.65e-08;3!DOID:127;2.65e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.19e-08,3;DOID:127,3.19e-08,3;DOID:3369,7.19e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.22e-08!94;UBERON:0001016!5.22e-08!94;UBERON:0000119!1.17e-07!312;UBERON:0000475!1.50e-07!365;UBERON:0000483!1.87e-07!309;UBERON:0005743!4.44e-07!86;UBERON:0001017!6.08e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.49e-07,1;UBERON:0001785,8.49e-07,1;UBERON:0002464,8.49e-07,1;UBERON:0004904,8.49e-07,1;UBERON:0001021,8.49e-07,1;UBERON:0003902,8.49e-07,1;UBERON:0005425,8.49e-07,1;UBERON:0002146,9.48e-07,1;UBERON:0005623,9.48e-07,1 | |||
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| |||
|short_description=p7@C20orf30 | |||
}} |
Revision as of 09:10, 12 September 2013
Short description: | p7@C20orf30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_C20orf30_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000202834_5end |
EntrezGene: | C20orf30 |
HGNC: | 15876 |
UniProt: | Q96A57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.49e-07 | 1 |
cranial nerve | 8.49e-07 | 1 |
nerve trunk | 8.49e-07 | 1 |
nerve connecting eye with brain | 8.49e-07 | 1 |
nerve | 8.49e-07 | 1 |
retinal neural layer | 8.49e-07 | 1 |
presumptive neural retina | 8.49e-07 | 1 |
pulmonary valve | 9.48e-07 | 1 |
semi-lunar valve | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.19e-08 | 3 |
leiomyoma | 3.19e-08 | 3 |
peripheral primitive neuroectodermal tumor | 7.19e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.