FFCP PHASE1:Hg19::chr20:50145427..50145440,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C8|description=CAGE_peak_at_chr20:50145427..50145440,+|id=chr20:50145427..50145440,+|ontology_enrichment_celltype=CL:0000838!6.22e-31!52;CL:0000738!1.20e-30!140;CL:0000542!2.99e-30!53;CL:0000051!2.99e-30!53;CL:0000988!1.47e-26!182;CL:0000080!2.48e-24!6;CL:0000037!1.89e-23!172;CL:0000566!1.89e-23!172;CL:0002031!1.62e-21!124;CL:0002032!4.39e-20!165;CL:0000837!4.39e-20!165;CL:0002087!3.13e-19!119;CL:0000624!5.47e-18!6;CL:0000084!1.57e-15!25;CL:0000827!1.57e-15!25;CL:0000623!1.93e-14!3;CL:0000825!1.93e-14!3;CL:0000791!2.15e-14!18;CL:0000789!2.15e-14!18;CL:0002420!2.15e-14!18;CL:0002419!2.15e-14!18;CL:0000790!2.15e-14!18;CL:0000767!1.18e-13!3;CL:0000842!9.89e-13!3;CL:0000224!1.14e-09!4;CL:0000081!1.70e-09!11;CL:0000945!1.75e-09!24;CL:0000826!1.75e-09!24;CL:0001014!3.12e-09!2;CL:0001016!3.12e-09!2;CL:0000094!1.16e-08!8;CL:0000134!1.86e-08!358;CL:0002320!3.89e-08!365;CL:0002274!8.84e-08!5;CL:0000457!8.84e-08!5;CL:0002191!8.84e-08!5;CL:0000097!8.84e-08!5;CL:0000831!8.84e-08!5;CL:0002028!8.84e-08!5;CL:0000219!5.20e-07!390|ontology_enrichment_celltype_v019=CL:0000623;1.20e-22;3!CL:0000084;2.16e-21;25!CL:0000767;2.44e-21;3!CL:0000624;4.12e-19;6!CL:0000791;1.31e-18;18!CL:0000789;1.31e-18;18!CL:0002419;1.31e-18;18!CL:0000542;2.19e-17;53!CL:0002393;3.73e-11;6!CL:0002397;3.73e-11;6!CL:0000081;2.92e-10;11!CL:0000094;2.46e-08;8!CL:0000895;2.89e-08;1|ontology_enrichment_celltype_v019_2=CL:0000838,2.29e-27,52;CL:0000542,8.52e-27,53;CL:0000051,8.52e-27,53;CL:0000738,6.47e-25,136;CL:0000988,7.33e-24,177;CL:0000623,1.20e-22,3;CL:0000825,1.20e-22,3;CL:0000084,2.13e-21,25;CL:0000827,2.13e-21,25;CL:0000767,2.36e-21,3;CL:0000037,2.30e-19,168;CL:0002031,3.35e-19,120;CL:0000624,4.32e-19,6;CL:0000791,1.34e-18,18;CL:0000789,1.34e-18,18;CL:0002420,1.34e-18,18;CL:0002419,1.34e-18,18;CL:0000790,1.34e-18,18;CL:0002032,1.71e-18,161;CL:0000837,1.71e-18,161;CL:0002087,4.45e-18,115;CL:0000081,2.81e-10,11;CL:0000094,2.43e-08,8;CL:0000810,3.33e-08,1;CL:0000895,3.33e-08,1;CL:0002436,3.33e-08,1;CL:0002427,3.33e-08,1;CL:0002428,3.33e-08,1;CL:0002429,3.33e-08,1;CL:0002433,3.33e-08,1;CL:0002431,3.33e-08,1;CL:0002432,3.33e-08,1;CL:0002393,1.28e-07,9;CL:0002397,1.28e-07,9;CL:0000134,7.53e-07,354|ontology_enrichment_development_v019=CL:0000790;1.31e-18;18!CL:0000051;2.19e-17;53!CL:0002427;2.89e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;2.89e-08;1!DOID:0060061;2.89e-08;1!DOID:8691;2.89e-08;1|ontology_enrichment_disease_v019_2=DOID:0060060,2.89e-08,1;DOID:0060061,2.89e-08,1;DOID:8691,2.89e-08,1|ontology_enrichment_uberon=UBERON:0000178!2.29e-09!15;UBERON:0000179!2.29e-09!15;UBERON:0000463!2.29e-09!15;UBERON:0002384!1.06e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-07;15!UBERON:0000179;2.10e-07;15!UBERON:0000463;2.10e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.08e-07,15;UBERON:0000179,2.08e-07,15;UBERON:0000463,2.08e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.246301768349837,0.157421562627358,3.14691421479123,2.68680578668049,4.4896675761662,0,0,0,0,0,0,3.87796785972314,7.01905566145496,4.99125002646459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,2.29363936875137,0,4.48406850385229,0,6.09800287352883,12.1833336452241,4.72883447698871,0,0,0,0,0,0.589211814949674,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,3.06576394881537,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,17.1365731741023,12.0348088102578,7.82051780967114,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.2496297038274,33.6379016780847,27.4654097638662,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.5885704098234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,2.22415090103705,1.46190729307638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr20:50145427..50145440,+ | |||
|id=chr20:50145427..50145440,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.22e-31!52;CL:0000738!1.20e-30!140;CL:0000542!2.99e-30!53;CL:0000051!2.99e-30!53;CL:0000988!1.47e-26!182;CL:0000080!2.48e-24!6;CL:0000037!1.89e-23!172;CL:0000566!1.89e-23!172;CL:0002031!1.62e-21!124;CL:0002032!4.39e-20!165;CL:0000837!4.39e-20!165;CL:0002087!3.13e-19!119;CL:0000624!5.47e-18!6;CL:0000084!1.57e-15!25;CL:0000827!1.57e-15!25;CL:0000623!1.93e-14!3;CL:0000825!1.93e-14!3;CL:0000791!2.15e-14!18;CL:0000789!2.15e-14!18;CL:0002420!2.15e-14!18;CL:0002419!2.15e-14!18;CL:0000790!2.15e-14!18;CL:0000767!1.18e-13!3;CL:0000842!9.89e-13!3;CL:0000224!1.14e-09!4;CL:0000081!1.70e-09!11;CL:0000945!1.75e-09!24;CL:0000826!1.75e-09!24;CL:0001014!3.12e-09!2;CL:0001016!3.12e-09!2;CL:0000094!1.16e-08!8;CL:0000134!1.86e-08!358;CL:0002320!3.89e-08!365;CL:0002274!8.84e-08!5;CL:0000457!8.84e-08!5;CL:0002191!8.84e-08!5;CL:0000097!8.84e-08!5;CL:0000831!8.84e-08!5;CL:0002028!8.84e-08!5;CL:0000219!5.20e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.20e-22;3!CL:0000084;2.16e-21;25!CL:0000767;2.44e-21;3!CL:0000624;4.12e-19;6!CL:0000791;1.31e-18;18!CL:0000789;1.31e-18;18!CL:0002419;1.31e-18;18!CL:0000542;2.19e-17;53!CL:0002393;3.73e-11;6!CL:0002397;3.73e-11;6!CL:0000081;2.92e-10;11!CL:0000094;2.46e-08;8!CL:0000895;2.89e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.29e-27,52;CL:0000542,8.52e-27,53;CL:0000051,8.52e-27,53;CL:0000738,6.47e-25,136;CL:0000988,7.33e-24,177;CL:0000623,1.20e-22,3;CL:0000825,1.20e-22,3;CL:0000084,2.13e-21,25;CL:0000827,2.13e-21,25;CL:0000767,2.36e-21,3;CL:0000037,2.30e-19,168;CL:0002031,3.35e-19,120;CL:0000624,4.32e-19,6;CL:0000791,1.34e-18,18;CL:0000789,1.34e-18,18;CL:0002420,1.34e-18,18;CL:0002419,1.34e-18,18;CL:0000790,1.34e-18,18;CL:0002032,1.71e-18,161;CL:0000837,1.71e-18,161;CL:0002087,4.45e-18,115;CL:0000081,2.81e-10,11;CL:0000094,2.43e-08,8;CL:0000810,3.33e-08,1;CL:0000895,3.33e-08,1;CL:0002436,3.33e-08,1;CL:0002427,3.33e-08,1;CL:0002428,3.33e-08,1;CL:0002429,3.33e-08,1;CL:0002433,3.33e-08,1;CL:0002431,3.33e-08,1;CL:0002432,3.33e-08,1;CL:0002393,1.28e-07,9;CL:0002397,1.28e-07,9;CL:0000134,7.53e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-18;18!CL:0000051;2.19e-17;53!CL:0002427;2.89e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.89e-08;1!DOID:0060061;2.89e-08;1!DOID:8691;2.89e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.89e-08,1;DOID:0060061,2.89e-08,1;DOID:8691,2.89e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.29e-09!15;UBERON:0000179!2.29e-09!15;UBERON:0000463!2.29e-09!15;UBERON:0002384!1.06e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-07;15!UBERON:0000179;2.10e-07;15!UBERON:0000463;2.10e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.08e-07,15;UBERON:0000179,2.08e-07,15;UBERON:0000463,2.08e-07,15 | |||
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|short_description=p@chr20:50145427..50145440,+ | |||
}} |
Revision as of 09:07, 12 September 2013
Short description: | p@chr20:50145427..50145440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:50145427..50145440, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.08e-07 | 15 |
haemolymphatic fluid | 2.08e-07 | 15 |
organism substance | 2.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.89e-08 | 1 |
cutaneous T cell lymphoma | 2.89e-08 | 1 |
mycosis fungoides | 2.89e-08 | 1 |
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