FFCP PHASE1:Hg19::chr21:39644370..39644379,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3772|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6261|TSSclassifier=S|UniProt=Q99712|association_with_transcript=25bp_to_ENST00000398930_5end|coexpression_cluster_id=C30|description=CAGE_peak_22_at_KCNJ15_5end|id=chr21:39644370..39644379,+|ontology_enrichment_celltype=CL:1000507!5.14e-22!12;CL:1000494!5.14e-22!12;CL:1000449!2.11e-16!16;CL:1000497!1.58e-14!18;CL:0002518!1.58e-14!18;CL:0000775!3.11e-11!3;CL:0000239!8.90e-11!3;CL:1000615!8.90e-11!3;CL:0002306!8.90e-11!3;CL:0002681!2.58e-09!13;CL:0002584!2.58e-09!13|ontology_enrichment_celltype_v019=CL:1000507;2.98e-12;10!CL:1000494;2.98e-12;10!CL:0000775;8.17e-11;3!CL:1000449;1.71e-08;15!CL:1000497;1.33e-07;17!CL:0002518;1.33e-07;17|ontology_enrichment_celltype_v019_2=CL:1000507,3.15e-12,10;CL:1000494,3.15e-12,10;CL:0000775,8.17e-11,3;CL:1000449,1.78e-08,15;CL:1000497,1.38e-07,17;CL:0002518,1.38e-07,17|ontology_enrichment_development_v019=UBERON:0007123;8.09e-24;5!UBERON:0003918;2.98e-12;10!UBERON:0007687;2.98e-12;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009773!5.14e-22!12;UBERON:0001231!5.14e-22!12;UBERON:0004810!5.14e-22!12;UBERON:0002113!3.07e-21!27;UBERON:0003918!3.07e-21!27;UBERON:0005095!3.07e-21!27;UBERON:0007687!3.07e-21!27;UBERON:0006555!8.02e-21!17;UBERON:0005103!8.02e-21!17;UBERON:0000083!8.02e-21!17;UBERON:0009201!8.02e-21!17;UBERON:0004819!8.02e-21!17;UBERON:0006553!8.02e-21!17;UBERON:0003074!8.02e-21!17;UBERON:0003060!8.02e-21!17;UBERON:0000080!1.27e-19!18;UBERON:0002120!1.27e-19!18;UBERON:0004875!1.27e-19!18;UBERON:0005721!1.27e-19!18;UBERON:0005754!1.27e-19!18;UBERON:0007297!1.27e-19!18;UBERON:0000489!1.04e-17!32;UBERON:0004876!1.38e-17!20;UBERON:0003887!1.04e-16!21;UBERON:0004211!2.11e-16!16;UBERON:0001285!2.11e-16!16;UBERON:0007684!2.11e-16!16;UBERON:0003220!2.11e-16!16;UBERON:0004208!2.11e-16!16;UBERON:0000341!2.95e-16!2;UBERON:0006554!2.10e-15!44;UBERON:0001008!5.03e-15!45;UBERON:0000058!2.40e-13!26;UBERON:0003064!8.13e-12!37;UBERON:0006853!8.90e-11!3;UBERON:0007685!8.90e-11!3;UBERON:0004134!8.90e-11!3;UBERON:0005172!1.00e-09!55;UBERON:0005173!1.00e-09!55;UBERON:0001225!2.58e-09!13;UBERON:0008987!2.58e-09!13;UBERON:0001301!6.65e-09!1;UBERON:0002417!1.24e-08!61;UBERON:0000916!1.24e-08!61;UBERON:0001851!1.37e-07!16;UBERON:0003103!1.79e-07!69;UBERON:0002046!3.34e-07!5;UBERON:0004117!3.34e-07!5;UBERON:0007689!3.34e-07!5;UBERON:0007123!3.34e-07!5;UBERON:0003091!3.34e-07!5;UBERON:0000353!3.77e-07!17|ontology_enrichment_uberon_v019=UBERON:0002046;8.09e-24;5!UBERON:0002113;3.24e-19;24!UBERON:0011143;3.24e-19;24!UBERON:0000489;5.25e-16;29!UBERON:0006554;1.72e-15;30!UBERON:0001008;1.72e-15;30!UBERON:0004211;2.98e-12;10!UBERON:0009773;2.98e-12;10!UBERON:0001231;2.98e-12;10!UBERON:0004810;2.98e-12;10!UBERON:0006555;1.71e-08;15!UBERON:0004819;1.71e-08;15!UBERON:0001285;1.71e-08;15!UBERON:0007684;1.71e-08;15!UBERON:0005172;5.13e-07;52!UBERON:0005173;5.13e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0002046,8.09e-24,5;UBERON:0004117,8.09e-24,5;UBERON:0007689,8.09e-24,5;UBERON:0007123,8.09e-24,5;UBERON:0003091,8.09e-24,5;UBERON:0002113,8.75e-18,26;UBERON:0003918,8.75e-18,26;UBERON:0011143,8.75e-18,26;UBERON:0005095,8.75e-18,26;UBERON:0007687,8.75e-18,26;UBERON:0000489,5.20e-15,31;UBERON:0004810,3.15e-12,10;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0006554,4.47e-10,47;UBERON:0001008,7.09e-10,48;UBERON:0005172,7.90e-09,54;UBERON:0005173,7.90e-09,54;UBERON:0004211,1.78e-08,15;UBERON:0009773,1.78e-08,15;UBERON:0001231,1.78e-08,15;UBERON:0001285,1.78e-08,15;UBERON:0007684,1.78e-08,15;UBERON:0004208,1.78e-08,15;UBERON:0006555,5.27e-08,16;UBERON:0004819,5.27e-08,16;UBERON:0002417,5.47e-08,60;UBERON:0000916,5.47e-08,60;UBERON:0008814,2.44e-07,18;UBERON:0003103,4.27e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,0,1.46139224653261,1.05551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6261 | |||
|TSSclassifier=S | |||
|UniProt=Q99712 | |||
|association_with_transcript=25bp_to_ENST00000398930_5end | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_22_at_KCNJ15_5end | |||
|id=chr21:39644370..39644379,+ | |||
|ontology_enrichment_celltype=CL:1000507!5.14e-22!12;CL:1000494!5.14e-22!12;CL:1000449!2.11e-16!16;CL:1000497!1.58e-14!18;CL:0002518!1.58e-14!18;CL:0000775!3.11e-11!3;CL:0000239!8.90e-11!3;CL:1000615!8.90e-11!3;CL:0002306!8.90e-11!3;CL:0002681!2.58e-09!13;CL:0002584!2.58e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.98e-12;10!CL:1000494;2.98e-12;10!CL:0000775;8.17e-11;3!CL:1000449;1.71e-08;15!CL:1000497;1.33e-07;17!CL:0002518;1.33e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.15e-12,10;CL:1000494,3.15e-12,10;CL:0000775,8.17e-11,3;CL:1000449,1.78e-08,15;CL:1000497,1.38e-07,17;CL:0002518,1.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.09e-24;5!UBERON:0003918;2.98e-12;10!UBERON:0007687;2.98e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!5.14e-22!12;UBERON:0001231!5.14e-22!12;UBERON:0004810!5.14e-22!12;UBERON:0002113!3.07e-21!27;UBERON:0003918!3.07e-21!27;UBERON:0005095!3.07e-21!27;UBERON:0007687!3.07e-21!27;UBERON:0006555!8.02e-21!17;UBERON:0005103!8.02e-21!17;UBERON:0000083!8.02e-21!17;UBERON:0009201!8.02e-21!17;UBERON:0004819!8.02e-21!17;UBERON:0006553!8.02e-21!17;UBERON:0003074!8.02e-21!17;UBERON:0003060!8.02e-21!17;UBERON:0000080!1.27e-19!18;UBERON:0002120!1.27e-19!18;UBERON:0004875!1.27e-19!18;UBERON:0005721!1.27e-19!18;UBERON:0005754!1.27e-19!18;UBERON:0007297!1.27e-19!18;UBERON:0000489!1.04e-17!32;UBERON:0004876!1.38e-17!20;UBERON:0003887!1.04e-16!21;UBERON:0004211!2.11e-16!16;UBERON:0001285!2.11e-16!16;UBERON:0007684!2.11e-16!16;UBERON:0003220!2.11e-16!16;UBERON:0004208!2.11e-16!16;UBERON:0000341!2.95e-16!2;UBERON:0006554!2.10e-15!44;UBERON:0001008!5.03e-15!45;UBERON:0000058!2.40e-13!26;UBERON:0003064!8.13e-12!37;UBERON:0006853!8.90e-11!3;UBERON:0007685!8.90e-11!3;UBERON:0004134!8.90e-11!3;UBERON:0005172!1.00e-09!55;UBERON:0005173!1.00e-09!55;UBERON:0001225!2.58e-09!13;UBERON:0008987!2.58e-09!13;UBERON:0001301!6.65e-09!1;UBERON:0002417!1.24e-08!61;UBERON:0000916!1.24e-08!61;UBERON:0001851!1.37e-07!16;UBERON:0003103!1.79e-07!69;UBERON:0002046!3.34e-07!5;UBERON:0004117!3.34e-07!5;UBERON:0007689!3.34e-07!5;UBERON:0007123!3.34e-07!5;UBERON:0003091!3.34e-07!5;UBERON:0000353!3.77e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;8.09e-24;5!UBERON:0002113;3.24e-19;24!UBERON:0011143;3.24e-19;24!UBERON:0000489;5.25e-16;29!UBERON:0006554;1.72e-15;30!UBERON:0001008;1.72e-15;30!UBERON:0004211;2.98e-12;10!UBERON:0009773;2.98e-12;10!UBERON:0001231;2.98e-12;10!UBERON:0004810;2.98e-12;10!UBERON:0006555;1.71e-08;15!UBERON:0004819;1.71e-08;15!UBERON:0001285;1.71e-08;15!UBERON:0007684;1.71e-08;15!UBERON:0005172;5.13e-07;52!UBERON:0005173;5.13e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,8.09e-24,5;UBERON:0004117,8.09e-24,5;UBERON:0007689,8.09e-24,5;UBERON:0007123,8.09e-24,5;UBERON:0003091,8.09e-24,5;UBERON:0002113,8.75e-18,26;UBERON:0003918,8.75e-18,26;UBERON:0011143,8.75e-18,26;UBERON:0005095,8.75e-18,26;UBERON:0007687,8.75e-18,26;UBERON:0000489,5.20e-15,31;UBERON:0004810,3.15e-12,10;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0006554,4.47e-10,47;UBERON:0001008,7.09e-10,48;UBERON:0005172,7.90e-09,54;UBERON:0005173,7.90e-09,54;UBERON:0004211,1.78e-08,15;UBERON:0009773,1.78e-08,15;UBERON:0001231,1.78e-08,15;UBERON:0001285,1.78e-08,15;UBERON:0007684,1.78e-08,15;UBERON:0004208,1.78e-08,15;UBERON:0006555,5.27e-08,16;UBERON:0004819,5.27e-08,16;UBERON:0002417,5.47e-08,60;UBERON:0000916,5.47e-08,60;UBERON:0008814,2.44e-07,18;UBERON:0003103,4.27e-07,68 | |||
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|short_description=p22@KCNJ15 | |||
}} |
Revision as of 10:21, 12 September 2013
Short description: | p22@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_KCNJ15_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 25bp_to_ENST00000398930_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | Q99712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.15e-12 | 10 |
nephron tubule epithelial cell | 3.15e-12 | 10 |
neutrophil | 8.17e-11 | 3 |
epithelial cell of nephron | 1.78e-08 | 15 |
kidney cell | 1.38e-07 | 17 |
kidney epithelial cell | 1.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 8.09e-24 | 5 |
pharyngeal pouch | 8.09e-24 | 5 |
thyroid diverticulum | 8.09e-24 | 5 |
pharyngeal pouch 2 | 8.09e-24 | 5 |
thyroid primordium | 8.09e-24 | 5 |
kidney | 8.75e-18 | 26 |
kidney mesenchyme | 8.75e-18 | 26 |
upper urinary tract | 8.75e-18 | 26 |
kidney rudiment | 8.75e-18 | 26 |
kidney field | 8.75e-18 | 26 |
cavitated compound organ | 5.20e-15 | 31 |
nephron tubule epithelium | 3.15e-12 | 10 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
urinary system structure | 4.47e-10 | 47 |
renal system | 7.09e-10 | 48 |
abdomen element | 7.90e-09 | 54 |
abdominal segment element | 7.90e-09 | 54 |
nephron epithelium | 1.78e-08 | 15 |
renal tubule | 1.78e-08 | 15 |
nephron tubule | 1.78e-08 | 15 |
nephron | 1.78e-08 | 15 |
uriniferous tubule | 1.78e-08 | 15 |
nephrogenic mesenchyme | 1.78e-08 | 15 |
excretory tube | 5.27e-08 | 16 |
kidney epithelium | 5.27e-08 | 16 |
abdominal segment of trunk | 5.47e-08 | 60 |
abdomen | 5.47e-08 | 60 |
pharyngeal arch system | 2.44e-07 | 18 |
compound organ | 4.27e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.