FFCP PHASE1:Hg19::chr21:45788974..45788984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7226|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12339|TSSclassifier=S|UniProt=|association_with_transcript=-19bp_to_ENST00000498430,uc002zex.1_5end|coexpression_cluster_id=C4082|description=CAGE_peak_14_at_TRPM2_5end|id=chr21:45788974..45788984,+|ontology_enrichment_celltype=CL:0002553!1.06e-11!1;CL:0000039!9.12e-07!7;CL:0000586!9.12e-07!7|ontology_enrichment_celltype_v019=CL:0002553;1.15e-29;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1|ontology_enrichment_development_v019=UBERON:0010122;1.43e-15;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!5.25e-54!9;UBERON:0007245!5.25e-54!9;UBERON:0010009!5.25e-54!9;UBERON:0010011!5.25e-54!9;UBERON:0000454!5.25e-54!9;UBERON:0009663!1.52e-51!7;UBERON:0000369!5.71e-41!4;UBERON:0002435!5.71e-41!4;UBERON:0000204!5.71e-41!4;UBERON:0010082!5.71e-41!4;UBERON:0002308!4.77e-40!9;UBERON:0000125!4.77e-40!9;UBERON:0002780!7.08e-38!41;UBERON:0001890!7.08e-38!41;UBERON:0006240!7.08e-38!41;UBERON:0003080!5.94e-37!42;UBERON:0002791!1.12e-33!33;UBERON:0001893!1.13e-32!34;UBERON:0005383!2.95e-31!3;UBERON:0005382!2.95e-31!3;UBERON:0003056!3.49e-29!61;UBERON:0001869!9.15e-29!32;UBERON:0002020!4.79e-27!34;UBERON:0003528!4.79e-27!34;UBERON:0001049!6.52e-27!57;UBERON:0005068!6.52e-27!57;UBERON:0006241!6.52e-27!57;UBERON:0007135!6.52e-27!57;UBERON:0002616!5.95e-26!59;UBERON:0000955!3.18e-25!69;UBERON:0006238!3.18e-25!69;UBERON:0001873!1.88e-21!2;UBERON:0010122!1.88e-21!2;UBERON:0001875!5.20e-21!2;UBERON:0006514!5.20e-21!2;UBERON:0001017!5.35e-21!82;UBERON:0003075!3.35e-20!86;UBERON:0007284!3.35e-20!86;UBERON:0005743!6.01e-20!86;UBERON:0002346!3.21e-19!90;UBERON:0000073!6.70e-18!94;UBERON:0001016!6.70e-18!94;UBERON:0000033!2.08e-13!123;UBERON:0000153!1.08e-12!129;UBERON:0007811!1.08e-12!129;UBERON:0007023!1.34e-12!115;UBERON:0001874!1.31e-11!1;UBERON:0001882!1.60e-11!1;UBERON:0005403!1.60e-11!1;UBERON:0002022!2.42e-11!1;UBERON:0002336!5.43e-11!1;UBERON:0001018!5.43e-11!1;UBERON:0002473!5.43e-11!1;UBERON:0005340!5.43e-11!1;UBERON:0002316!5.43e-11!1;UBERON:0003544!5.43e-11!1;UBERON:0001020!5.43e-11!1;UBERON:0005970!5.43e-11!1;UBERON:0002437!5.43e-11!1;UBERON:0000025!3.40e-09!194;UBERON:0004121!3.85e-09!169;UBERON:0000349!6.19e-09!5;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0001950!1.12e-07!20;UBERON:0002619!5.06e-07!22;UBERON:0004111!6.14e-07!241|ontology_enrichment_uberon_v019=UBERON:0009663;2.34e-64;7!UBERON:0000369;1.63e-63;4!UBERON:0002435;1.63e-63;4!UBERON:0000204;1.63e-63;4!UBERON:0002420;3.01e-50;9!UBERON:0000125;3.01e-50;9!UBERON:0007245;3.01e-50;9!UBERON:0002308;3.01e-50;9!UBERON:0010009;3.01e-50;9!UBERON:0010011;3.01e-50;9!UBERON:0000454;3.01e-50;9!UBERON:0005383;1.98e-38;3!UBERON:0005382;1.98e-38;3!UBERON:0001882;3.16e-29;1!UBERON:0001874;3.16e-29;1!UBERON:0005403;3.16e-29;1!UBERON:0001873;1.43e-15;2!UBERON:0001875;1.78e-15;2!UBERON:0006514;1.78e-15;2!UBERON:0002791;2.84e-14;32!UBERON:0001869;3.43e-13;32!UBERON:0003528;5.32e-13;34!UBERON:0002020;5.32e-13;34!UBERON:0001893;2.80e-11;34!UBERON:0002780;4.03e-10;41!UBERON:0001890;4.03e-10;41!UBERON:0000955;1.42e-07;68!UBERON:0000349;6.39e-07;5!UBERON:0001017;7.43e-07;75!UBERON:0000073;9.16e-07;53!UBERON:0002616;9.16e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.16e-64,7;UBERON:0000369,1.46e-63,4;UBERON:0002435,1.46e-63,4;UBERON:0000204,1.46e-63,4;UBERON:0010082,1.46e-63,4;UBERON:0002420,2.83e-50,9;UBERON:0000125,2.83e-50,9;UBERON:0007245,2.83e-50,9;UBERON:0002308,2.83e-50,9;UBERON:0010009,2.83e-50,9;UBERON:0010011,2.83e-50,9;UBERON:0000454,2.83e-50,9;UBERON:0005383,1.49e-38,3;UBERON:0005382,1.49e-38,3;UBERON:0001874,2.37e-29,1;UBERON:0001882,4.20e-29,1;UBERON:0005403,4.20e-29,1;UBERON:0001873,1.33e-15,2;UBERON:0010122,1.33e-15,2;UBERON:0001875,1.78e-15,2;UBERON:0006514,1.78e-15,2;UBERON:0002791,3.41e-14,32;UBERON:0001869,3.41e-14,32;UBERON:0003528,2.05e-13,34;UBERON:0002020,2.05e-13,34;UBERON:0001893,2.05e-13,34;UBERON:0002780,2.90e-11,41;UBERON:0001890,2.90e-11,41;UBERON:0003080,2.90e-11,41;UBERON:0006240,2.90e-11,41;UBERON:0000073,7.27e-09,53;UBERON:0002616,7.27e-09,53;UBERON:0001049,2.02e-08,56;UBERON:0005068,2.02e-08,56;UBERON:0006241,2.02e-08,56;UBERON:0007135,2.02e-08,56;UBERON:0003056,8.93e-08,61;UBERON:0000955,6.23e-07,68;UBERON:0006238,6.23e-07,68;UBERON:0000349,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000498430,uc002zex.1_5end | |||
|coexpression_cluster_id=C4082 | |||
|description=CAGE_peak_14_at_TRPM2_5end | |||
|id=chr21:45788974..45788984,+ | |||
|ontology_enrichment_celltype=CL:0002553!1.06e-11!1;CL:0000039!9.12e-07!7;CL:0000586!9.12e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.15e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.43e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!5.25e-54!9;UBERON:0007245!5.25e-54!9;UBERON:0010009!5.25e-54!9;UBERON:0010011!5.25e-54!9;UBERON:0000454!5.25e-54!9;UBERON:0009663!1.52e-51!7;UBERON:0000369!5.71e-41!4;UBERON:0002435!5.71e-41!4;UBERON:0000204!5.71e-41!4;UBERON:0010082!5.71e-41!4;UBERON:0002308!4.77e-40!9;UBERON:0000125!4.77e-40!9;UBERON:0002780!7.08e-38!41;UBERON:0001890!7.08e-38!41;UBERON:0006240!7.08e-38!41;UBERON:0003080!5.94e-37!42;UBERON:0002791!1.12e-33!33;UBERON:0001893!1.13e-32!34;UBERON:0005383!2.95e-31!3;UBERON:0005382!2.95e-31!3;UBERON:0003056!3.49e-29!61;UBERON:0001869!9.15e-29!32;UBERON:0002020!4.79e-27!34;UBERON:0003528!4.79e-27!34;UBERON:0001049!6.52e-27!57;UBERON:0005068!6.52e-27!57;UBERON:0006241!6.52e-27!57;UBERON:0007135!6.52e-27!57;UBERON:0002616!5.95e-26!59;UBERON:0000955!3.18e-25!69;UBERON:0006238!3.18e-25!69;UBERON:0001873!1.88e-21!2;UBERON:0010122!1.88e-21!2;UBERON:0001875!5.20e-21!2;UBERON:0006514!5.20e-21!2;UBERON:0001017!5.35e-21!82;UBERON:0003075!3.35e-20!86;UBERON:0007284!3.35e-20!86;UBERON:0005743!6.01e-20!86;UBERON:0002346!3.21e-19!90;UBERON:0000073!6.70e-18!94;UBERON:0001016!6.70e-18!94;UBERON:0000033!2.08e-13!123;UBERON:0000153!1.08e-12!129;UBERON:0007811!1.08e-12!129;UBERON:0007023!1.34e-12!115;UBERON:0001874!1.31e-11!1;UBERON:0001882!1.60e-11!1;UBERON:0005403!1.60e-11!1;UBERON:0002022!2.42e-11!1;UBERON:0002336!5.43e-11!1;UBERON:0001018!5.43e-11!1;UBERON:0002473!5.43e-11!1;UBERON:0005340!5.43e-11!1;UBERON:0002316!5.43e-11!1;UBERON:0003544!5.43e-11!1;UBERON:0001020!5.43e-11!1;UBERON:0005970!5.43e-11!1;UBERON:0002437!5.43e-11!1;UBERON:0000025!3.40e-09!194;UBERON:0004121!3.85e-09!169;UBERON:0000349!6.19e-09!5;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0001950!1.12e-07!20;UBERON:0002619!5.06e-07!22;UBERON:0004111!6.14e-07!241 | |||
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|short_description=p14@TRPM2 | |||
}} |
Revision as of 10:41, 12 September 2013
Short description: | p14@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_TRPM2_5end |
Coexpression cluster: | C4082_caudate_testicular_putamen_nonsmall_globus_nucleus_diencephalon |
Association with transcript: | -19bp_to_ENST00000498430, uc002zex.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.33e-29 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.