FFCP PHASE1:Hg19::chr3:12392909..12392921,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9236|TSSclassifier=S|UniProt=P37231|association_with_transcript=-49bp_to_ENST00000287820,ENST00000477039_5end|coexpression_cluster_id=C29|description=CAGE_peak_11_at_PPARG_5end|id=chr3:12392909..12392921,+|ontology_enrichment_celltype=CL:0002194!5.64e-58!63;CL:0000576!5.64e-58!63;CL:0000040!5.64e-58!63;CL:0000559!5.64e-58!63;CL:0000860!6.24e-57!45;CL:0002009!7.12e-56!65;CL:0000766!1.92e-51!76;CL:0000839!3.85e-51!70;CL:0002057!5.43e-51!42;CL:0000557!2.84e-50!71;CL:0000763!3.88e-33!112;CL:0000049!3.88e-33!112;CL:0002087!1.01e-25!119;CL:0002031!2.94e-24!124;CL:0000738!7.10e-23!140;CL:0002032!6.85e-19!165;CL:0000837!6.85e-19!165;CL:0000037!1.13e-17!172;CL:0000566!1.13e-17!172;CL:0000136!1.80e-17!15;CL:0000988!4.20e-16!182;CL:0002615!7.26e-09!3;CL:0000235!1.08e-08!10;CL:0000134!2.36e-08!358;CL:0002320!5.84e-08!365;CL:0002150!1.24e-07!3;CL:0000861!1.24e-07!3|ontology_enrichment_celltype_v019=CL:0000860;2.30e-41;33!CL:0002057;2.30e-41;33!CL:0000473;1.36e-33;39!CL:0000234;1.36e-33;39!CL:0000136;4.40e-27;13!CL:0000576;7.90e-20;48!CL:0000766;1.51e-11;69!CL:0000840;2.70e-09;5!CL:0002615;3.25e-08;3|ontology_enrichment_celltype_v019_2=CL:0002194,1.15e-36,59;CL:0000576,1.15e-36,59;CL:0000040,1.15e-36,59;CL:0000559,1.15e-36,59;CL:0002009,2.45e-35,61;CL:0000860,1.43e-34,42;CL:0002057,1.43e-34,42;CL:0000473,9.53e-34,48;CL:0000234,9.53e-34,48;CL:0000839,2.32e-32,66;CL:0000557,8.10e-32,67;CL:0000766,2.51e-29,72;CL:0000136,3.19e-23,15;CL:0000763,3.85e-18,108;CL:0000049,3.85e-18,108;CL:0002087,8.99e-17,115;CL:0002031,6.82e-16,120;CL:0000738,1.64e-13,136;CL:0002032,9.76e-11,161;CL:0000837,9.76e-11,161;CL:0000037,4.15e-10,168;CL:0000988,2.25e-09,177;CL:0000840,2.90e-09,5;CL:0001029,2.90e-09,5;CL:0002615,4.20e-08,3;CL:0000134,1.63e-07,354;CL:0002320,2.97e-07,361|ontology_enrichment_development_v019=CL:0002057;7.31e-26;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.96e-43!80;UBERON:0001474!1.15e-39!86;UBERON:0002390!1.53e-33!102;UBERON:0003061!1.53e-33!102;UBERON:0004765!3.39e-32!101;UBERON:0001434!3.39e-32!101;UBERON:0002193!1.41e-29!112;UBERON:0002405!1.60e-28!115;UBERON:0002204!1.60e-18!167;UBERON:0003081!1.54e-13!216;UBERON:0002384!5.34e-08!375;UBERON:0000926!3.13e-07!448;UBERON:0004120!3.13e-07!448;UBERON:0006603!3.13e-07!448|ontology_enrichment_uberon_v019=UBERON:0002171;3.08e-07;1!UBERON:0006518;3.08e-07;1!UBERON:0008949;3.08e-07;1!UBERON:0000101;3.08e-07;1!UBERON:0002167;3.08e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-27,76;UBERON:0001474,3.02e-25,82;UBERON:0004765,1.26e-22,90;UBERON:0002405,9.27e-22,93;UBERON:0002390,1.97e-20,98;UBERON:0003061,1.97e-20,98;UBERON:0001434,6.16e-20,100;UBERON:0002193,3.85e-18,108;UBERON:0002204,3.40e-10,167;UBERON:0002384,1.18e-07,371;UBERON:0003081,1.26e-07,203;UBERON:0002171,2.82e-07,1;UBERON:0006518,2.82e-07,1;UBERON:0008949,2.82e-07,1;UBERON:0000101,2.82e-07,1;UBERON:0002167,2.82e-07,1;UBERON:0007029,8.98e-07,1|phase1_expression=0,3.8538094300377,2.39622486963151,1.0007329835313,0.446961094427288,0,0,0.631719873426831,3.13422753839806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.485168122375632,3.71886459049095,2.46700732813095,4.02618282163635,1.43846196161075,0.768482119587302,2.12834006899727,4.13694816883942,3.22742341791913,4.06279459783025,1.31769637679823,1.09162460023138,2.9214052977861,1.53041946185451,2.88836124368484,1.91801137739712,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0,2.76373531782418,3.12889751052121,3.9093992046921,0,0.368277635987565,0.632924774881769,0,0.212604299965044,0.209658645508376,0.336985893439485,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,4.54366351116557,6.96518949197069,2.39324328933957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,4.91408956792399,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |||
|TSSclassifier=S | |||
|UniProt=P37231 | |||
|association_with_transcript=-49bp_to_ENST00000287820,ENST00000477039_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_11_at_PPARG_5end | |||
|id=chr3:12392909..12392921,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.64e-58!63;CL:0000576!5.64e-58!63;CL:0000040!5.64e-58!63;CL:0000559!5.64e-58!63;CL:0000860!6.24e-57!45;CL:0002009!7.12e-56!65;CL:0000766!1.92e-51!76;CL:0000839!3.85e-51!70;CL:0002057!5.43e-51!42;CL:0000557!2.84e-50!71;CL:0000763!3.88e-33!112;CL:0000049!3.88e-33!112;CL:0002087!1.01e-25!119;CL:0002031!2.94e-24!124;CL:0000738!7.10e-23!140;CL:0002032!6.85e-19!165;CL:0000837!6.85e-19!165;CL:0000037!1.13e-17!172;CL:0000566!1.13e-17!172;CL:0000136!1.80e-17!15;CL:0000988!4.20e-16!182;CL:0002615!7.26e-09!3;CL:0000235!1.08e-08!10;CL:0000134!2.36e-08!358;CL:0002320!5.84e-08!365;CL:0002150!1.24e-07!3;CL:0000861!1.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-41;33!CL:0002057;2.30e-41;33!CL:0000473;1.36e-33;39!CL:0000234;1.36e-33;39!CL:0000136;4.40e-27;13!CL:0000576;7.90e-20;48!CL:0000766;1.51e-11;69!CL:0000840;2.70e-09;5!CL:0002615;3.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.15e-36,59;CL:0000576,1.15e-36,59;CL:0000040,1.15e-36,59;CL:0000559,1.15e-36,59;CL:0002009,2.45e-35,61;CL:0000860,1.43e-34,42;CL:0002057,1.43e-34,42;CL:0000473,9.53e-34,48;CL:0000234,9.53e-34,48;CL:0000839,2.32e-32,66;CL:0000557,8.10e-32,67;CL:0000766,2.51e-29,72;CL:0000136,3.19e-23,15;CL:0000763,3.85e-18,108;CL:0000049,3.85e-18,108;CL:0002087,8.99e-17,115;CL:0002031,6.82e-16,120;CL:0000738,1.64e-13,136;CL:0002032,9.76e-11,161;CL:0000837,9.76e-11,161;CL:0000037,4.15e-10,168;CL:0000988,2.25e-09,177;CL:0000840,2.90e-09,5;CL:0001029,2.90e-09,5;CL:0002615,4.20e-08,3;CL:0000134,1.63e-07,354;CL:0002320,2.97e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.31e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.96e-43!80;UBERON:0001474!1.15e-39!86;UBERON:0002390!1.53e-33!102;UBERON:0003061!1.53e-33!102;UBERON:0004765!3.39e-32!101;UBERON:0001434!3.39e-32!101;UBERON:0002193!1.41e-29!112;UBERON:0002405!1.60e-28!115;UBERON:0002204!1.60e-18!167;UBERON:0003081!1.54e-13!216;UBERON:0002384!5.34e-08!375;UBERON:0000926!3.13e-07!448;UBERON:0004120!3.13e-07!448;UBERON:0006603!3.13e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.08e-07;1!UBERON:0006518;3.08e-07;1!UBERON:0008949;3.08e-07;1!UBERON:0000101;3.08e-07;1!UBERON:0002167;3.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-27,76;UBERON:0001474,3.02e-25,82;UBERON:0004765,1.26e-22,90;UBERON:0002405,9.27e-22,93;UBERON:0002390,1.97e-20,98;UBERON:0003061,1.97e-20,98;UBERON:0001434,6.16e-20,100;UBERON:0002193,3.85e-18,108;UBERON:0002204,3.40e-10,167;UBERON:0002384,1.18e-07,371;UBERON:0003081,1.26e-07,203;UBERON:0002171,2.82e-07,1;UBERON:0006518,2.82e-07,1;UBERON:0008949,2.82e-07,1;UBERON:0000101,2.82e-07,1;UBERON:0002167,2.82e-07,1;UBERON:0007029,8.98e-07,1 | |||
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|short_description=p11@PPARG | |||
}} |
Revision as of 21:14, 12 September 2013
Short description: | p11@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PPARG_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -49bp_to_ENST00000287820, ENST00000477039_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | P37231 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.15e-36 | 59 |
monocyte | 1.15e-36 | 59 |
monoblast | 1.15e-36 | 59 |
promonocyte | 1.15e-36 | 59 |
macrophage dendritic cell progenitor | 2.45e-35 | 61 |
classical monocyte | 1.43e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-34 | 42 |
defensive cell | 9.53e-34 | 48 |
phagocyte | 9.53e-34 | 48 |
myeloid lineage restricted progenitor cell | 2.32e-32 | 66 |
granulocyte monocyte progenitor cell | 8.10e-32 | 67 |
myeloid leukocyte | 2.51e-29 | 72 |
fat cell | 3.19e-23 | 15 |
myeloid cell | 3.85e-18 | 108 |
common myeloid progenitor | 3.85e-18 | 108 |
nongranular leukocyte | 8.99e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 6.82e-16 | 120 |
leukocyte | 1.64e-13 | 136 |
hematopoietic oligopotent progenitor cell | 9.76e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.76e-11 | 161 |
hematopoietic stem cell | 4.15e-10 | 168 |
hematopoietic cell | 2.25e-09 | 177 |
immature conventional dendritic cell | 2.90e-09 | 5 |
common dendritic progenitor | 2.90e-09 | 5 |
adipocyte of omentum tissue | 4.20e-08 | 3 |
mesenchymal cell | 1.63e-07 | 354 |
connective tissue cell | 2.97e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-27 | 76 |
bone element | 3.02e-25 | 82 |
skeletal element | 1.26e-22 | 90 |
immune system | 9.27e-22 | 93 |
hematopoietic system | 1.97e-20 | 98 |
blood island | 1.97e-20 | 98 |
skeletal system | 6.16e-20 | 100 |
hemolymphoid system | 3.85e-18 | 108 |
musculoskeletal system | 3.40e-10 | 167 |
connective tissue | 1.18e-07 | 371 |
lateral plate mesoderm | 1.26e-07 | 203 |
lower lobe of right lung | 2.82e-07 | 1 |
right lung lobe | 2.82e-07 | 1 |
lower lobe of lung | 2.82e-07 | 1 |
lobe of lung | 2.82e-07 | 1 |
right lung | 2.82e-07 | 1 |
surface | 8.98e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.