FFCP PHASE1:Hg19::chr4:189881560..189881604,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C357|description=CAGE_peak_at_chr4:189881560..189881604,-|id=chr4:189881560..189881604,-|ontology_enrichment_celltype=CL:0005020!1.86e-25!6;CL:0002138!1.86e-25!6;CL:0005022!1.86e-25!6;CL:0002144!7.93e-14!3;CL:0002139!5.76e-13!24;CL:0000115!3.02e-10!35;CL:0002078!9.61e-08!44|ontology_enrichment_celltype_v019=CL:0002138;1.09e-63;6!CL:0002144;1.21e-46;3!CL:0002139;2.99e-40;24!CL:0000115;1.58e-19;36!CL:0002078;1.01e-16;45!CL:0000213;5.70e-10;58!CL:0000215;5.70e-10;58!CL:0000071;2.51e-08;18|ontology_enrichment_celltype_v019_2=CL:0005020,1.50e-63,6;CL:0002138,1.50e-63,6;CL:0005022,1.50e-63,6;CL:0002144,1.03e-46,3;CL:0002139,3.23e-40,24;CL:0000115,1.16e-26,36;CL:0002078,3.15e-21,45;CL:0000213,2.41e-16,58;CL:0000215,2.41e-16,58;CL:0000071,2.45e-08,18;CL:0002546,2.45e-08,18;CL:0000222,1.75e-07,121|ontology_enrichment_development_v019=CL:0005022;1.09e-63;6!UBERON:0007297;7.21e-09;2!CL:0002546;2.51e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!8.88e-26!10;UBERON:0001473!6.36e-19!8;UBERON:0004536!6.36e-19!8;UBERON:0006558!6.36e-19!8;UBERON:0001915!7.93e-14!3;UBERON:0001982!7.93e-14!3;UBERON:0001630!2.63e-09!2;UBERON:0005090!2.63e-09!2;UBERON:0000341!4.30e-09!2;UBERON:0003127!6.17e-09!2;UBERON:0007023!8.75e-08!115|ontology_enrichment_uberon_v019=UBERON:0001473;7.52e-48;8!UBERON:0004536;7.52e-48;8!UBERON:0006558;7.52e-48;8!UBERON:0010523;1.21e-46;3!UBERON:0001915;1.21e-46;3!UBERON:0001982;1.21e-46;3!UBERON:0002465;2.46e-38;10!UBERON:0001301;2.08e-16;1!UBERON:0002171;2.08e-16;1!UBERON:0006518;2.08e-16;1!UBERON:0008949;2.08e-16;1!UBERON:0000101;2.08e-16;1!UBERON:0002167;2.08e-16;1!UBERON:0002405;2.76e-14;27!UBERON:0000055;1.08e-12;65!UBERON:0002049;3.37e-09;75!UBERON:0007798;3.37e-09;75!UBERON:0003127;7.21e-09;2!UBERON:0002193;8.08e-09;42!UBERON:0004638;2.51e-08;18!UBERON:0001986;2.51e-08;18!UBERON:0004852;2.51e-08;18!UBERON:0000487;6.62e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.58e-48,8;UBERON:0004536,9.58e-48,8;UBERON:0006558,9.58e-48,8;UBERON:0010523,1.03e-46,3;UBERON:0001915,1.03e-46,3;UBERON:0001982,1.03e-46,3;UBERON:0002465,2.98e-38,10;UBERON:0002171,2.25e-16,1;UBERON:0006518,2.25e-16,1;UBERON:0008949,2.25e-16,1;UBERON:0000101,2.25e-16,1;UBERON:0002167,2.25e-16,1;UBERON:0001301,2.63e-16,1;UBERON:0000055,7.49e-14,68;UBERON:0002049,5.39e-12,78;UBERON:0007798,5.39e-12,78;UBERON:0003127,5.94e-09,2;UBERON:0004535,2.18e-08,109;UBERON:0004638,2.45e-08,18;UBERON:0001986,2.45e-08,18;UBERON:0004852,2.45e-08,18;UBERON:0001009,3.82e-08,112;UBERON:0000487,6.48e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.06729878806013,3.3472061276467,5.23678112241891,1.52054421143703,6.83373761134875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6408565970094,2.77791307545966,4.75635380586496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.67952103036807,0.313808538937,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_at_chr4:189881560..189881604,- | |||
|id=chr4:189881560..189881604,- | |||
|ontology_enrichment_celltype=CL:0005020!1.86e-25!6;CL:0002138!1.86e-25!6;CL:0005022!1.86e-25!6;CL:0002144!7.93e-14!3;CL:0002139!5.76e-13!24;CL:0000115!3.02e-10!35;CL:0002078!9.61e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.09e-63;6!CL:0002144;1.21e-46;3!CL:0002139;2.99e-40;24!CL:0000115;1.58e-19;36!CL:0002078;1.01e-16;45!CL:0000213;5.70e-10;58!CL:0000215;5.70e-10;58!CL:0000071;2.51e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.50e-63,6;CL:0002138,1.50e-63,6;CL:0005022,1.50e-63,6;CL:0002144,1.03e-46,3;CL:0002139,3.23e-40,24;CL:0000115,1.16e-26,36;CL:0002078,3.15e-21,45;CL:0000213,2.41e-16,58;CL:0000215,2.41e-16,58;CL:0000071,2.45e-08,18;CL:0002546,2.45e-08,18;CL:0000222,1.75e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.09e-63;6!UBERON:0007297;7.21e-09;2!CL:0002546;2.51e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!8.88e-26!10;UBERON:0001473!6.36e-19!8;UBERON:0004536!6.36e-19!8;UBERON:0006558!6.36e-19!8;UBERON:0001915!7.93e-14!3;UBERON:0001982!7.93e-14!3;UBERON:0001630!2.63e-09!2;UBERON:0005090!2.63e-09!2;UBERON:0000341!4.30e-09!2;UBERON:0003127!6.17e-09!2;UBERON:0007023!8.75e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;7.52e-48;8!UBERON:0004536;7.52e-48;8!UBERON:0006558;7.52e-48;8!UBERON:0010523;1.21e-46;3!UBERON:0001915;1.21e-46;3!UBERON:0001982;1.21e-46;3!UBERON:0002465;2.46e-38;10!UBERON:0001301;2.08e-16;1!UBERON:0002171;2.08e-16;1!UBERON:0006518;2.08e-16;1!UBERON:0008949;2.08e-16;1!UBERON:0000101;2.08e-16;1!UBERON:0002167;2.08e-16;1!UBERON:0002405;2.76e-14;27!UBERON:0000055;1.08e-12;65!UBERON:0002049;3.37e-09;75!UBERON:0007798;3.37e-09;75!UBERON:0003127;7.21e-09;2!UBERON:0002193;8.08e-09;42!UBERON:0004638;2.51e-08;18!UBERON:0001986;2.51e-08;18!UBERON:0004852;2.51e-08;18!UBERON:0000487;6.62e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.58e-48,8;UBERON:0004536,9.58e-48,8;UBERON:0006558,9.58e-48,8;UBERON:0010523,1.03e-46,3;UBERON:0001915,1.03e-46,3;UBERON:0001982,1.03e-46,3;UBERON:0002465,2.98e-38,10;UBERON:0002171,2.25e-16,1;UBERON:0006518,2.25e-16,1;UBERON:0008949,2.25e-16,1;UBERON:0000101,2.25e-16,1;UBERON:0002167,2.25e-16,1;UBERON:0001301,2.63e-16,1;UBERON:0000055,7.49e-14,68;UBERON:0002049,5.39e-12,78;UBERON:0007798,5.39e-12,78;UBERON:0003127,5.94e-09,2;UBERON:0004535,2.18e-08,109;UBERON:0004638,2.45e-08,18;UBERON:0001986,2.45e-08,18;UBERON:0004852,2.45e-08,18;UBERON:0001009,3.82e-08,112;UBERON:0000487,6.48e-07,22 | |||
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|short_description=p@chr4:189881560..189881604,- | |||
}} |
Revision as of 10:24, 13 September 2013
Short description: | p@chr4:189881560..189881604, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:189881560..189881604, - |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.50e-63 | 6 |
endothelial cell of lymphatic vessel | 1.50e-63 | 6 |
vascular lymphangioblast | 1.50e-63 | 6 |
capillary endothelial cell | 1.03e-46 | 3 |
endothelial cell of vascular tree | 3.23e-40 | 24 |
endothelial cell | 1.16e-26 | 36 |
meso-epithelial cell | 3.15e-21 | 45 |
lining cell | 2.41e-16 | 58 |
barrier cell | 2.41e-16 | 58 |
blood vessel endothelial cell | 2.45e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.45e-08 | 18 |
mesodermal cell | 1.75e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 9.58e-48 | 8 |
lymph vasculature | 9.58e-48 | 8 |
lymphatic part of lymphoid system | 9.58e-48 | 8 |
microcirculatory vessel | 1.03e-46 | 3 |
endothelium of capillary | 1.03e-46 | 3 |
capillary | 1.03e-46 | 3 |
lymphoid system | 2.98e-38 | 10 |
lower lobe of right lung | 2.25e-16 | 1 |
right lung lobe | 2.25e-16 | 1 |
lower lobe of lung | 2.25e-16 | 1 |
lobe of lung | 2.25e-16 | 1 |
right lung | 2.25e-16 | 1 |
epididymis | 2.63e-16 | 1 |
vessel | 7.49e-14 | 68 |
vasculature | 5.39e-12 | 78 |
vascular system | 5.39e-12 | 78 |
open tracheal system trachea | 5.94e-09 | 2 |
cardiovascular system | 2.18e-08 | 109 |
blood vessel endothelium | 2.45e-08 | 18 |
endothelium | 2.45e-08 | 18 |
cardiovascular system endothelium | 2.45e-08 | 18 |
circulatory system | 3.82e-08 | 112 |
simple squamous epithelium | 6.48e-07 | 22 |
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