FFCP PHASE1:Hg19::chr6:31554779..31554804,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7940|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14189|TSSclassifier=S|UniProt=Q5STB1,Q5STA6|association_with_transcript=0bp_to_ENST00000376090,ENST00000396107,ENST00000396114_5end|coexpression_cluster_id=C26|description=CAGE_peak_3_at_LST1_5end|id=chr6:31554779..31554804,+|ontology_enrichment_celltype=CL:0000037!7.26e-68!172;CL:0000566!7.26e-68!172;CL:0002032!7.52e-64!165;CL:0000837!7.52e-64!165;CL:0000988!7.71e-61!182;CL:0000738!4.93e-59!140;CL:0000763!5.84e-56!112;CL:0000049!5.84e-56!112;CL:0002031!1.92e-48!124;CL:0002087!7.03e-48!119;CL:0000766!1.82e-47!76;CL:0000557!1.81e-43!71;CL:0002009!7.31e-43!65;CL:0002194!5.98e-41!63;CL:0000576!5.98e-41!63;CL:0000040!5.98e-41!63;CL:0000559!5.98e-41!63;CL:0000839!2.92e-40!70;CL:0002057!1.68e-37!42;CL:0000860!1.65e-33!45;CL:0002393!2.22e-09!9;CL:0002397!2.22e-09!9;CL:0000838!4.76e-09!52;CL:0000134!5.27e-09!358;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0002320!4.07e-08!365;CL:0000451!4.60e-08!10;CL:0000094!3.53e-07!8;CL:0000990!6.37e-07!8|ontology_enrichment_celltype_v019=CL:0000860;6.06e-32;33!CL:0002057;6.06e-32;33!CL:0000473;4.67e-31;39!CL:0000234;4.67e-31;39!CL:0000576;8.00e-31;48!CL:0000766;8.81e-24;69!CL:0000763;6.68e-20;100!CL:0000738;1.62e-14;136!CL:0002087;5.78e-13;104!CL:0000988;3.01e-11;177!CL:0000451;2.07e-09;10!CL:0000094;2.76e-08;8!CL:0000990;4.61e-08;8!CL:0002393;1.21e-07;6!CL:0002397;1.21e-07;6!CL:0000840;9.17e-07;5|ontology_enrichment_celltype_v019_2=CL:0000037,1.32e-69,168;CL:0000763,1.58e-67,108;CL:0000049,1.58e-67,108;CL:0002032,7.45e-65,161;CL:0000837,7.45e-65,161;CL:0000988,1.07e-63,177;CL:0000738,6.43e-59,136;CL:0000766,1.31e-57,72;CL:0002009,2.35e-57,61;CL:0002194,5.41e-55,59;CL:0000576,5.41e-55,59;CL:0000040,5.41e-55,59;CL:0000559,5.41e-55,59;CL:0000557,8.90e-53,67;CL:0000473,4.06e-50,48;CL:0000234,4.06e-50,48;CL:0002087,1.44e-49,115;CL:0000839,6.58e-48,66;CL:0002031,6.52e-46,120;CL:0000860,8.36e-45,42;CL:0002057,8.36e-45,42;CL:0000134,1.87e-12,354;CL:0002320,1.55e-11,361;CL:0002393,5.87e-11,9;CL:0002397,5.87e-11,9;CL:0000451,2.23e-09,10;CL:0000219,1.91e-08,386;CL:0000094,2.57e-08,8;CL:0000990,5.21e-08,8;CL:0000840,9.09e-07,5;CL:0001029,9.09e-07,5|ontology_enrichment_development_v019=CL:0002057;4.26e-32;42!CL:0000049;3.96e-19;108|ontology_enrichment_disease=DOID:8692!7.56e-09!31;DOID:1240!8.76e-08!39|ontology_enrichment_disease_v019=DOID:8692;2.11e-10;31|ontology_enrichment_disease_v019_2=DOID:8692,5.15e-11,31;DOID:1240,4.25e-08,39|ontology_enrichment_uberon=UBERON:0002390!7.14e-45!102;UBERON:0003061!7.14e-45!102;UBERON:0002193!1.35e-42!112;UBERON:0002371!1.12e-36!80;UBERON:0001474!5.37e-32!86;UBERON:0002405!9.72e-29!115;UBERON:0007023!1.92e-28!115;UBERON:0004765!2.04e-24!101;UBERON:0001434!2.04e-24!101;UBERON:0003081!1.08e-10!216;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002780!3.85e-08!41;UBERON:0001890!3.85e-08!41;UBERON:0006240!3.85e-08!41;UBERON:0003080!9.82e-08!42;UBERON:0002204!1.02e-07!167;UBERON:0001893!2.04e-07!34;UBERON:0002020!2.15e-07!34;UBERON:0003528!2.15e-07!34;UBERON:0002384!3.05e-07!375;UBERON:0002791!3.36e-07!33;UBERON:0000178!6.05e-07!15;UBERON:0000179!6.05e-07!15;UBERON:0000463!6.05e-07!15;UBERON:0002616!7.20e-07!59|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-08;15!UBERON:0000179;2.08e-08;15!UBERON:0000463;2.08e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-54,98;UBERON:0003061,2.15e-54,98;UBERON:0002193,2.26e-50,108;UBERON:0002371,2.97e-45,76;UBERON:0002405,2.85e-42,93;UBERON:0001474,4.90e-40,82;UBERON:0004765,3.33e-34,90;UBERON:0001434,2.69e-28,100;UBERON:0003081,3.59e-17,203;UBERON:0007023,3.91e-16,114;UBERON:0002384,1.13e-10,371;UBERON:0002204,2.73e-09,167;UBERON:0000178,2.11e-08,15;UBERON:0000179,2.11e-08,15;UBERON:0000463,2.11e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.37544130346312,1.23150884174919,1.57421562627358,97.1609763816793,37.2314516154296,98.4630544290243,0,0,0,0,0.284338464974843,27.3048408581408,67.587439840889,56.55353418658,76.170815621264,14.1066748771152,5.83008598834163,9.5302960024649,96.1082358332923,90.3123505416254,89.0283504559285,96.2256212789534,93.3351105809544,105.60987247523,107.884647120806,126.543389025376,162.226809703569,119.28200553487,104.56851874058,119.175308203021,104.286256106603,102.066900121634,174.610147413831,136.207332105052,121.953030288916,152.801573065971,78.1747581442517,118.680876284871,105.703738132108,126.531228042063,91.9164063999646,121.450338554137,106.278185403602,118.898105399806,150.077491691236,96.2585209187056,101.644627532568,176.902474579454,209.98775459407,185.390949569518,204.626838016175,140.747774826558,124.196290379926,70.7192581467153,322.634425915093,200.706927293882,183.760138687222,5.27988733383968,9.83049500271837,4.44754626931777,11.5217160092957,5.20514783146816,4.02326707968138,5.94940385506376,2.86216126360609,2.8460648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95,5.73358332605805,0,1.56380427439104,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,1.65833887891756,3.72358785102823,0.639701945702943,0.23806443146374,1.16260037704811,2.29676442894674,0,0.12729431655633,0.606351566874658,1.08858373948481,1.36893320434112,3.03084238565644,0.717222053926764,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0,4.22674966541155,0.320568492303233|short_description=p3@LST1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |||
|TSSclassifier=S | |||
|UniProt=Q5STB1,Q5STA6 | |||
|association_with_transcript=0bp_to_ENST00000376090,ENST00000396107,ENST00000396114_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_LST1_5end | |||
|id=chr6:31554779..31554804,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.26e-68!172;CL:0000566!7.26e-68!172;CL:0002032!7.52e-64!165;CL:0000837!7.52e-64!165;CL:0000988!7.71e-61!182;CL:0000738!4.93e-59!140;CL:0000763!5.84e-56!112;CL:0000049!5.84e-56!112;CL:0002031!1.92e-48!124;CL:0002087!7.03e-48!119;CL:0000766!1.82e-47!76;CL:0000557!1.81e-43!71;CL:0002009!7.31e-43!65;CL:0002194!5.98e-41!63;CL:0000576!5.98e-41!63;CL:0000040!5.98e-41!63;CL:0000559!5.98e-41!63;CL:0000839!2.92e-40!70;CL:0002057!1.68e-37!42;CL:0000860!1.65e-33!45;CL:0002393!2.22e-09!9;CL:0002397!2.22e-09!9;CL:0000838!4.76e-09!52;CL:0000134!5.27e-09!358;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0002320!4.07e-08!365;CL:0000451!4.60e-08!10;CL:0000094!3.53e-07!8;CL:0000990!6.37e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.06e-32;33!CL:0002057;6.06e-32;33!CL:0000473;4.67e-31;39!CL:0000234;4.67e-31;39!CL:0000576;8.00e-31;48!CL:0000766;8.81e-24;69!CL:0000763;6.68e-20;100!CL:0000738;1.62e-14;136!CL:0002087;5.78e-13;104!CL:0000988;3.01e-11;177!CL:0000451;2.07e-09;10!CL:0000094;2.76e-08;8!CL:0000990;4.61e-08;8!CL:0002393;1.21e-07;6!CL:0002397;1.21e-07;6!CL:0000840;9.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.32e-69,168;CL:0000763,1.58e-67,108;CL:0000049,1.58e-67,108;CL:0002032,7.45e-65,161;CL:0000837,7.45e-65,161;CL:0000988,1.07e-63,177;CL:0000738,6.43e-59,136;CL:0000766,1.31e-57,72;CL:0002009,2.35e-57,61;CL:0002194,5.41e-55,59;CL:0000576,5.41e-55,59;CL:0000040,5.41e-55,59;CL:0000559,5.41e-55,59;CL:0000557,8.90e-53,67;CL:0000473,4.06e-50,48;CL:0000234,4.06e-50,48;CL:0002087,1.44e-49,115;CL:0000839,6.58e-48,66;CL:0002031,6.52e-46,120;CL:0000860,8.36e-45,42;CL:0002057,8.36e-45,42;CL:0000134,1.87e-12,354;CL:0002320,1.55e-11,361;CL:0002393,5.87e-11,9;CL:0002397,5.87e-11,9;CL:0000451,2.23e-09,10;CL:0000219,1.91e-08,386;CL:0000094,2.57e-08,8;CL:0000990,5.21e-08,8;CL:0000840,9.09e-07,5;CL:0001029,9.09e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.26e-32;42!CL:0000049;3.96e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!7.56e-09!31;DOID:1240!8.76e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.11e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.15e-11,31;DOID:1240,4.25e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.14e-45!102;UBERON:0003061!7.14e-45!102;UBERON:0002193!1.35e-42!112;UBERON:0002371!1.12e-36!80;UBERON:0001474!5.37e-32!86;UBERON:0002405!9.72e-29!115;UBERON:0007023!1.92e-28!115;UBERON:0004765!2.04e-24!101;UBERON:0001434!2.04e-24!101;UBERON:0003081!1.08e-10!216;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002780!3.85e-08!41;UBERON:0001890!3.85e-08!41;UBERON:0006240!3.85e-08!41;UBERON:0003080!9.82e-08!42;UBERON:0002204!1.02e-07!167;UBERON:0001893!2.04e-07!34;UBERON:0002020!2.15e-07!34;UBERON:0003528!2.15e-07!34;UBERON:0002384!3.05e-07!375;UBERON:0002791!3.36e-07!33;UBERON:0000178!6.05e-07!15;UBERON:0000179!6.05e-07!15;UBERON:0000463!6.05e-07!15;UBERON:0002616!7.20e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.08e-08;15!UBERON:0000179;2.08e-08;15!UBERON:0000463;2.08e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-54,98;UBERON:0003061,2.15e-54,98;UBERON:0002193,2.26e-50,108;UBERON:0002371,2.97e-45,76;UBERON:0002405,2.85e-42,93;UBERON:0001474,4.90e-40,82;UBERON:0004765,3.33e-34,90;UBERON:0001434,2.69e-28,100;UBERON:0003081,3.59e-17,203;UBERON:0007023,3.91e-16,114;UBERON:0002384,1.13e-10,371;UBERON:0002204,2.73e-09,167;UBERON:0000178,2.11e-08,15;UBERON:0000179,2.11e-08,15;UBERON:0000463,2.11e-08,15 | |||
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| |||
|short_description=p3@LST1 | |||
}} |
Revision as of 20:13, 13 September 2013
Short description: | p3@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LST1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000376090, ENST00000396107, ENST00000396114_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1Q5STA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-54 | 98 |
blood island | 2.15e-54 | 98 |
hemolymphoid system | 2.26e-50 | 108 |
bone marrow | 2.97e-45 | 76 |
immune system | 2.85e-42 | 93 |
bone element | 4.90e-40 | 82 |
skeletal element | 3.33e-34 | 90 |
skeletal system | 2.69e-28 | 100 |
lateral plate mesoderm | 3.59e-17 | 203 |
adult organism | 3.91e-16 | 114 |
connective tissue | 1.13e-10 | 371 |
musculoskeletal system | 2.73e-09 | 167 |
blood | 2.11e-08 | 15 |
haemolymphatic fluid | 2.11e-08 | 15 |
organism substance | 2.11e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.15e-11 | 31 |
leukemia | 4.25e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.