FFCP PHASE1:Hg19::chr6:35697296..35697310,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr6:35697296..35697310,-|id=chr6:35697296..35697310,-|ontology_enrichment_celltype=CL:0000181!2.01e-13!12;CL:0000417!2.01e-13!12;CL:0000668!2.01e-13!12;CL:0000414!2.01e-13!12;CL:0000412!2.01e-13!12;CL:0000182!2.01e-13!12;CL:0000819!1.04e-07!1;CL:0002563!1.93e-07!4|ontology_enrichment_celltype_v019=CL:0002231;1.99e-07;3!CL:0000182;5.47e-07;12|ontology_enrichment_celltype_v019_2=CL:0002231,2.05e-07,3;CL:0000182,5.31e-07,12|ontology_enrichment_development_v019=UBERON:0005425;3.91e-19;1!UBERON:0003918;3.43e-08;10!UBERON:0007687;3.43e-08;10!UBERON:0003056;2.97e-07;3|ontology_enrichment_disease=DOID:178!9.72e-08!1;DOID:326!9.72e-08!1;DOID:3978!9.72e-08!1;DOID:3394!9.72e-08!1;DOID:5844!9.72e-08!1;DOID:0060073!1.04e-07!1;DOID:8675!1.04e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.82e-12!55;UBERON:0005173!1.82e-12!55;UBERON:0002107!5.76e-12!19;UBERON:0006925!5.76e-12!19;UBERON:0008836!5.76e-12!19;UBERON:0001155!7.43e-12!9;UBERON:0005057!1.83e-11!26;UBERON:0002417!4.81e-11!61;UBERON:0000916!4.81e-11!61;UBERON:0002368!9.10e-11!35;UBERON:0003929!2.22e-10!54;UBERON:0008835!2.93e-10!22;UBERON:0003894!2.93e-10!22;UBERON:0009854!8.64e-10!23;UBERON:0000059!1.01e-09!11;UBERON:0002365!1.80e-09!31;UBERON:0002330!1.80e-09!31;UBERON:0002530!2.67e-09!59;UBERON:0007499!5.81e-09!25;UBERON:0009497!5.81e-09!25;UBERON:0000015!5.81e-09!25;UBERON:0002423!5.81e-09!25;UBERON:0006235!5.81e-09!25;UBERON:0004161!5.81e-09!25;UBERON:0009856!1.35e-08!26;UBERON:0000949!4.04e-08!45;UBERON:0000941!4.35e-08!1;UBERON:0004904!4.35e-08!1;UBERON:0002464!4.35e-08!1;UBERON:0001021!4.35e-08!1;UBERON:0001785!4.35e-08!1;UBERON:0000160!5.63e-08!27;UBERON:0001301!5.70e-08!1;UBERON:0001242!1.93e-07!4;UBERON:0001262!1.93e-07!4;UBERON:0004786!1.93e-07!4;UBERON:0004808!1.93e-07!4;UBERON:0001277!1.93e-07!4;UBERON:0004921!3.90e-07!129;UBERON:0004185!3.90e-07!129|ontology_enrichment_uberon_v019=UBERON:0000941;3.91e-19;1!UBERON:0001785;3.91e-19;1!UBERON:0002464;3.91e-19;1!UBERON:0004904;3.91e-19;1!UBERON:0001021;3.91e-19;1!UBERON:0000160;2.97e-16;17!UBERON:0005409;8.33e-13;22!UBERON:0003714;2.99e-10;2!UBERON:0005162;2.99e-10;2!UBERON:0000122;2.99e-10;2!UBERON:0002107;2.81e-09;19!UBERON:0006925;2.81e-09;19!UBERON:0001155;6.88e-09;9!UBERON:0004921;1.02e-08;33!UBERON:0000059;1.96e-07;11!UBERON:0002423;3.49e-07;25!UBERON:0005172;4.34e-07;52!UBERON:0005173;4.34e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.25e-19,1;UBERON:0001785,3.25e-19,1;UBERON:0002464,3.25e-19,1;UBERON:0004904,3.25e-19,1;UBERON:0001021,3.25e-19,1;UBERON:0003902,3.25e-19,1;UBERON:0005425,3.25e-19,1;UBERON:0000160,2.97e-16,17;UBERON:0005409,2.28e-11,25;UBERON:0003714,2.72e-10,2;UBERON:0005162,2.72e-10,2;UBERON:0000122,2.72e-10,2;UBERON:0002107,2.73e-09,19;UBERON:0006925,2.73e-09,19;UBERON:0008836,2.73e-09,19;UBERON:0004921,2.98e-09,118;UBERON:0001155,6.36e-09,9;UBERON:0003929,1.61e-08,54;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0008835,4.23e-08,22;UBERON:0003894,4.23e-08,22;UBERON:0009854,9.01e-08,23;UBERON:0002417,1.21e-07,60;UBERON:0000916,1.21e-07,60;UBERON:0000059,1.84e-07,11;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0007499,3.42e-07,25;UBERON:0009497,3.42e-07,25;UBERON:0000015,3.42e-07,25;UBERON:0002423,3.42e-07,25;UBERON:0006235,3.42e-07,25;UBERON:0004161,3.42e-07,25;UBERON:0009856,6.17e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,2.36315962672562,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14234568938218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1413530714339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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr6:35697296..35697310,- | |||
|id=chr6:35697296..35697310,- | |||
|ontology_enrichment_celltype=CL:0000181!2.01e-13!12;CL:0000417!2.01e-13!12;CL:0000668!2.01e-13!12;CL:0000414!2.01e-13!12;CL:0000412!2.01e-13!12;CL:0000182!2.01e-13!12;CL:0000819!1.04e-07!1;CL:0002563!1.93e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.99e-07;3!CL:0000182;5.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.05e-07,3;CL:0000182,5.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.91e-19;1!UBERON:0003918;3.43e-08;10!UBERON:0007687;3.43e-08;10!UBERON:0003056;2.97e-07;3 | |||
|ontology_enrichment_disease=DOID:178!9.72e-08!1;DOID:326!9.72e-08!1;DOID:3978!9.72e-08!1;DOID:3394!9.72e-08!1;DOID:5844!9.72e-08!1;DOID:0060073!1.04e-07!1;DOID:8675!1.04e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.82e-12!55;UBERON:0005173!1.82e-12!55;UBERON:0002107!5.76e-12!19;UBERON:0006925!5.76e-12!19;UBERON:0008836!5.76e-12!19;UBERON:0001155!7.43e-12!9;UBERON:0005057!1.83e-11!26;UBERON:0002417!4.81e-11!61;UBERON:0000916!4.81e-11!61;UBERON:0002368!9.10e-11!35;UBERON:0003929!2.22e-10!54;UBERON:0008835!2.93e-10!22;UBERON:0003894!2.93e-10!22;UBERON:0009854!8.64e-10!23;UBERON:0000059!1.01e-09!11;UBERON:0002365!1.80e-09!31;UBERON:0002330!1.80e-09!31;UBERON:0002530!2.67e-09!59;UBERON:0007499!5.81e-09!25;UBERON:0009497!5.81e-09!25;UBERON:0000015!5.81e-09!25;UBERON:0002423!5.81e-09!25;UBERON:0006235!5.81e-09!25;UBERON:0004161!5.81e-09!25;UBERON:0009856!1.35e-08!26;UBERON:0000949!4.04e-08!45;UBERON:0000941!4.35e-08!1;UBERON:0004904!4.35e-08!1;UBERON:0002464!4.35e-08!1;UBERON:0001021!4.35e-08!1;UBERON:0001785!4.35e-08!1;UBERON:0000160!5.63e-08!27;UBERON:0001301!5.70e-08!1;UBERON:0001242!1.93e-07!4;UBERON:0001262!1.93e-07!4;UBERON:0004786!1.93e-07!4;UBERON:0004808!1.93e-07!4;UBERON:0001277!1.93e-07!4;UBERON:0004921!3.90e-07!129;UBERON:0004185!3.90e-07!129 | |||
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|short_description=p@chr6:35697296..35697310,- | |||
}} |
Revision as of 20:42, 13 September 2013
Short description: | p@chr6:35697296..35697310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:35697296..35697310, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.05e-07 | 3 |
hepatocyte | 5.31e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.