FFCP PHASE1:Hg19::chr6:53976235..53976254,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90523|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21355|TSSclassifier=S|UniProt=A6NDT1,C9JSN1,Q5VWP4|association_with_transcript=0bp_to_ENST00000358276,ENST00000370878,ENST00000502396,ENST00000511744,uc011dwz.1,uc011dxa.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_MLIP_5end|id=chr6:53976235..53976254,+|ontology_enrichment_celltype=CL:0002139!5.34e-33!24;CL:0000071!6.60e-32!18;CL:0002546!6.60e-32!18;CL:1000413!3.40e-21!9;CL:0000115!5.76e-21!35;CL:0002078!1.24e-15!44;CL:0002543!9.02e-15!6;CL:0002544!9.25e-15!6;CL:0000213!2.47e-12!57;CL:0000215!2.47e-12!57;CL:0002618!3.02e-08!3;CL:0002605!1.83e-07!3;CL:0000076!1.96e-07!62|ontology_enrichment_celltype_v019=CL:0002139;5.64e-22;24!CL:0000071;6.57e-17;18!CL:0000115;6.98e-15;36!CL:0002543;3.09e-11;6!CL:1000413;3.38e-11;9!CL:0002545;4.51e-09;2!CL:0002078;8.02e-08;45|ontology_enrichment_celltype_v019_2=CL:0002139,5.27e-22,24;CL:0000071,5.60e-17,18;CL:0002546,5.60e-17,18;CL:0000115,2.53e-16,36;CL:0002078,1.61e-12,45;CL:0002543,2.85e-11,6;CL:1000413,3.02e-11,9;CL:0002545,3.50e-09,2;CL:0000213,4.01e-09,58;CL:0000215,4.01e-09,58;CL:0002544,9.49e-07,6|ontology_enrichment_development_v019=CL:0002546;6.57e-17;18!UBERON:0006601;4.34e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.21e-56!82;UBERON:0002616!5.86e-56!59;UBERON:0000956!2.10e-55!25;UBERON:0000203!2.10e-55!25;UBERON:0001049!3.04e-55!57;UBERON:0005068!3.04e-55!57;UBERON:0006241!3.04e-55!57;UBERON:0007135!3.04e-55!57;UBERON:0000955!4.10e-54!69;UBERON:0006238!4.10e-54!69;UBERON:0001893!4.52e-54!34;UBERON:0001869!7.47e-54!32;UBERON:0002020!2.13e-53!34;UBERON:0003528!2.13e-53!34;UBERON:0005743!3.25e-53!86;UBERON:0002791!1.25e-51!33;UBERON:0001950!1.44e-49!20;UBERON:0002619!1.90e-49!22;UBERON:0000073!4.77e-47!94;UBERON:0001016!4.77e-47!94;UBERON:0002780!1.16e-46!41;UBERON:0001890!1.16e-46!41;UBERON:0006240!1.16e-46!41;UBERON:0003080!2.27e-45!42;UBERON:0002346!1.54e-43!90;UBERON:0003075!1.70e-41!86;UBERON:0007284!1.70e-41!86;UBERON:0003056!4.59e-33!61;UBERON:0001986!6.60e-32!18;UBERON:0004638!6.60e-32!18;UBERON:0004852!6.60e-32!18;UBERON:0000033!3.03e-30!123;UBERON:0000025!1.29e-28!194;UBERON:0000153!2.74e-28!129;UBERON:0007811!2.74e-28!129;UBERON:0000487!2.58e-25!22;UBERON:0000924!7.02e-25!173;UBERON:0006601!7.02e-25!173;UBERON:0004111!1.85e-23!241;UBERON:0004121!3.25e-23!169;UBERON:0000477!3.66e-22!286;UBERON:0006914!9.20e-22!25;UBERON:0003915!3.40e-21!9;UBERON:0004700!3.40e-21!9;UBERON:0001917!3.40e-21!9;UBERON:0007023!9.61e-19!115;UBERON:0000119!4.96e-17!312;UBERON:0000200!5.67e-17!6;UBERON:0001871!1.01e-16!7;UBERON:0000483!9.44e-16!309;UBERON:0001872!2.80e-14!5;UBERON:0002021!3.19e-14!5;UBERON:0004733!3.36e-11!12;UBERON:0002028!3.36e-11!12;UBERON:0007277!3.36e-11!12;UBERON:0003076!5.03e-11!15;UBERON:0003057!5.03e-11!15;UBERON:0002049!1.96e-10!79;UBERON:0007798!1.96e-10!79;UBERON:0004732!3.10e-10!13;UBERON:0001638!1.35e-09!9;UBERON:0003920!1.35e-09!9;UBERON:0004582!1.35e-09!9;UBERON:0002771!1.94e-09!3;UBERON:0000349!3.87e-09!5;UBERON:0002680!1.04e-08!9;UBERON:0001895!1.04e-08!9;UBERON:0010092!1.04e-08!9;UBERON:0000064!2.16e-08!219;UBERON:0000055!2.99e-08!69;UBERON:0000988!1.63e-07!3;UBERON:0004535!2.03e-07!110;UBERON:0002298!3.82e-07!8;UBERON:0001009!4.50e-07!113;UBERON:0001981!8.72e-07!60;UBERON:0007500!8.72e-07!60;UBERON:0004537!8.72e-07!60;UBERON:0006965!8.72e-07!60;UBERON:0001870!8.97e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;5.34e-82;22!UBERON:0001950;6.81e-82;20!UBERON:0000956;6.24e-72;25!UBERON:0000203;6.24e-72;25!UBERON:0001869;9.59e-60;32!UBERON:0001893;1.16e-54;34!UBERON:0002791;7.25e-54;32!UBERON:0003528;4.91e-50;34!UBERON:0002020;4.91e-50;34!UBERON:0002780;2.35e-36;41!UBERON:0001890;2.35e-36;41!UBERON:0000200;3.62e-27;6!UBERON:0000073;1.03e-26;53!UBERON:0002616;1.03e-26;53!UBERON:0001871;6.54e-23;6!UBERON:0001872;1.24e-22;5!UBERON:0002021;1.27e-22;5!UBERON:0000955;2.13e-19;68!UBERON:0001017;2.24e-19;75!UBERON:0004638;6.57e-17;18!UBERON:0001986;6.57e-17;18!UBERON:0004852;6.57e-17;18!UBERON:0001870;2.12e-14;3!UBERON:0000349;2.12e-14;5!UBERON:0001016;2.14e-14;83!UBERON:0000487;1.48e-13;22!UBERON:0006914;9.56e-12;25!UBERON:0003915;3.38e-11;9!UBERON:0004700;3.38e-11;9!UBERON:0001917;3.38e-11;9!UBERON:0002771;1.92e-10;2!UBERON:0002702;5.42e-10;2!UBERON:0001876;6.06e-10;2!UBERON:0005800;4.51e-09;2!UBERON:0001515;4.51e-09;2!UBERON:0000490;3.58e-08;33!UBERON:0001638;1.60e-07;9!UBERON:0003920;1.60e-07;9!UBERON:0004582;1.60e-07;9!UBERON:0011216;8.25e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.85e-82,22;UBERON:0001950,6.03e-82,20;UBERON:0000956,5.73e-72,25;UBERON:0000203,5.73e-72,25;UBERON:0001869,4.05e-67,32;UBERON:0001893,5.90e-63,34;UBERON:0002791,3.51e-61,32;UBERON:0003528,2.27e-57,34;UBERON:0002020,2.27e-57,34;UBERON:0002780,1.66e-51,41;UBERON:0001890,1.66e-51,41;UBERON:0003080,1.66e-51,41;UBERON:00062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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21355 | |||
|TSSclassifier=S | |||
|UniProt=A6NDT1,C9JSN1,Q5VWP4 | |||
|association_with_transcript=0bp_to_ENST00000358276,ENST00000370878,ENST00000502396,ENST00000511744,uc011dwz.1,uc011dxa.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_MLIP_5end | |||
|id=chr6:53976235..53976254,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.34e-33!24;CL:0000071!6.60e-32!18;CL:0002546!6.60e-32!18;CL:1000413!3.40e-21!9;CL:0000115!5.76e-21!35;CL:0002078!1.24e-15!44;CL:0002543!9.02e-15!6;CL:0002544!9.25e-15!6;CL:0000213!2.47e-12!57;CL:0000215!2.47e-12!57;CL:0002618!3.02e-08!3;CL:0002605!1.83e-07!3;CL:0000076!1.96e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.64e-22;24!CL:0000071;6.57e-17;18!CL:0000115;6.98e-15;36!CL:0002543;3.09e-11;6!CL:1000413;3.38e-11;9!CL:0002545;4.51e-09;2!CL:0002078;8.02e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.27e-22,24;CL:0000071,5.60e-17,18;CL:0002546,5.60e-17,18;CL:0000115,2.53e-16,36;CL:0002078,1.61e-12,45;CL:0002543,2.85e-11,6;CL:1000413,3.02e-11,9;CL:0002545,3.50e-09,2;CL:0000213,4.01e-09,58;CL:0000215,4.01e-09,58;CL:0002544,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.57e-17;18!UBERON:0006601;4.34e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@MLIP | |||
}} |
Revision as of 21:26, 13 September 2013
Short description: | p3@MLIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MLIP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000358276, ENST00000370878, ENST00000502396, ENST00000511744, uc011dwz.1, uc011dxa.1_5end |
EntrezGene: | MLIP |
HGNC: | 21355 |
UniProt: | A6NDT1C9JSN1Q5VWP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.27e-22 | 24 |
blood vessel endothelial cell | 5.60e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.60e-17 | 18 |
endothelial cell | 2.53e-16 | 36 |
meso-epithelial cell | 1.61e-12 | 45 |
vein endothelial cell | 2.85e-11 | 6 |
endothelial cell of artery | 3.02e-11 | 9 |
thoracic aorta endothelial cell | 3.50e-09 | 2 |
lining cell | 4.01e-09 | 58 |
barrier cell | 4.01e-09 | 58 |
aortic endothelial cell | 9.49e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.