FFCP PHASE1:Hg19::chr9:12693305..12693317,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12450|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000459790_5end|coexpression_cluster_id=C58|description=CAGE_peak_10_at_TYRP1_5end|id=chr9:12693305..12693317,+|ontology_enrichment_celltype=CL:0000148!9.47e-58!10;CL:0000541!9.47e-58!10;CL:0000147!2.24e-53!14;CL:0002567!4.27e-36!3;CL:0000710!1.15e-28!20;CL:0000075!4.21e-21!27;CL:0000325!1.06e-18!39;CL:0002077!3.65e-17!33;CL:0002566!2.32e-13!1;CL:0000333!4.91e-13!41;CL:0000149!8.17e-13!4;CL:0000453!3.59e-10!5;CL:0000133!5.31e-09!59;CL:0000221!2.07e-07!71;CL:0002600!3.70e-07!2;CL:0001014!4.42e-07!2;CL:0001016!4.42e-07!2|ontology_enrichment_celltype_v019=CL:0000148;5.07e-107;10!CL:0000147;1.54e-76;14!CL:0002567;9.19e-66;3!CL:0000710;1.18e-53;20!CL:0000075;8.60e-40;27!CL:0002077;7.63e-28;34!CL:0002566;2.10e-23;1!CL:0000149;6.87e-07;4|ontology_enrichment_celltype_v019_2=CL:0000148,5.07e-107,10;CL:0000541,5.07e-107,10;CL:0000147,1.54e-76,14;CL:0002567,9.19e-66,3;CL:0000710,1.18e-53,20;CL:0000075,8.60e-40,27;CL:0002077,1.26e-31,34;CL:0000333,5.08e-25,41;CL:0002566,2.10e-23,1;CL:0000133,1.23e-17,59;CL:0000221,1.58e-14,72;CL:0000149,6.87e-07,4|ontology_enrichment_development_v019=CL:0000133;1.29e-09;59!UBERON:0003056;1.30e-08;3!CL:0000221;4.21e-08;72|ontology_enrichment_disease=DOID:1909!3.48e-07!2|ontology_enrichment_disease_v019=DOID:1909;3.62e-12;2|ontology_enrichment_disease_v019_2=DOID:1909,3.62e-12,2|ontology_enrichment_uberon=UBERON:0000966!2.47e-10!5;UBERON:0005388!2.47e-10!5;UBERON:0001802!2.47e-10!5;UBERON:0001897!5.28e-07!2|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7634440931326,4.96584953225761,12.8939191931052,6.84289784090821,25.5012181904242,22.8260723961377,20.8653295820322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0748346365426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@TYRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000459790_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_10_at_TYRP1_5end | |||
|id=chr9:12693305..12693317,+ | |||
|ontology_enrichment_celltype=CL:0000148!9.47e-58!10;CL:0000541!9.47e-58!10;CL:0000147!2.24e-53!14;CL:0002567!4.27e-36!3;CL:0000710!1.15e-28!20;CL:0000075!4.21e-21!27;CL:0000325!1.06e-18!39;CL:0002077!3.65e-17!33;CL:0002566!2.32e-13!1;CL:0000333!4.91e-13!41;CL:0000149!8.17e-13!4;CL:0000453!3.59e-10!5;CL:0000133!5.31e-09!59;CL:0000221!2.07e-07!71;CL:0002600!3.70e-07!2;CL:0001014!4.42e-07!2;CL:0001016!4.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.07e-107;10!CL:0000147;1.54e-76;14!CL:0002567;9.19e-66;3!CL:0000710;1.18e-53;20!CL:0000075;8.60e-40;27!CL:0002077;7.63e-28;34!CL:0002566;2.10e-23;1!CL:0000149;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.07e-107,10;CL:0000541,5.07e-107,10;CL:0000147,1.54e-76,14;CL:0002567,9.19e-66,3;CL:0000710,1.18e-53,20;CL:0000075,8.60e-40,27;CL:0002077,1.26e-31,34;CL:0000333,5.08e-25,41;CL:0002566,2.10e-23,1;CL:0000133,1.23e-17,59;CL:0000221,1.58e-14,72;CL:0000149,6.87e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.29e-09;59!UBERON:0003056;1.30e-08;3!CL:0000221;4.21e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!3.48e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.62e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.47e-10!5;UBERON:0005388!2.47e-10!5;UBERON:0001802!2.47e-10!5;UBERON:0001897!5.28e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7634440931326,4.96584953225761,12.8939191931052,6.84289784090821,25.5012181904242,22.8260723961377,20.8653295820322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0748346365426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@TYRP1 | |||
}} |
Revision as of 07:22, 14 September 2013
Short description: | p10@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TYRP1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000459790_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.07e-107 | 10 |
melanoblast | 5.07e-107 | 10 |
pigment cell | 1.54e-76 | 14 |
light melanocyte | 9.19e-66 | 3 |
neurecto-epithelial cell | 1.18e-53 | 20 |
columnar/cuboidal epithelial cell | 8.60e-40 | 27 |
ecto-epithelial cell | 1.26e-31 | 34 |
migratory neural crest cell | 5.08e-25 | 41 |
dark melanocyte | 2.10e-23 | 1 |
neurectodermal cell | 1.23e-17 | 59 |
ectodermal cell | 1.58e-14 | 72 |
visual pigment cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.62e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.