FFCP PHASE1:Hg19::chr9:71735882..71735896,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9414|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11828|TSSclassifier=W|UniProt=B7Z2R3|association_with_transcript=-283bp_to_NM_001170414_5end|coexpression_cluster_id=C4826|description=CAGE_peak_6_at_TJP2_5end|id=chr9:71735882..71735896,+|ontology_enrichment_celltype=CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!2.61e-15!254;CL:1000449!7.47e-12!16;CL:1000497!2.95e-10!18;CL:0002518!2.95e-10!18;CL:0000039!3.07e-10!7;CL:0000586!3.07e-10!7;CL:0002322!3.76e-09!5;CL:0000239!1.01e-07!3;CL:1000615!1.01e-07!3;CL:0002306!1.01e-07!3;CL:0002681!2.78e-07!13;CL:0002584!2.78e-07!13|ontology_enrichment_celltype_v019=CL:1000507;3.36e-41;10!CL:1000494;3.36e-41;10!CL:1000449;5.84e-27;15!CL:1000497;1.32e-23;17!CL:0002518;1.32e-23;17!CL:0000239;5.26e-17;3!CL:1000615;5.26e-17;3!CL:0002306;5.26e-17;3!CL:0002681;2.48e-15;12!CL:0002584;2.48e-15;12!CL:0000039;8.61e-12;7!CL:0000586;8.61e-12;7!CL:0000182;2.25e-07;12|ontology_enrichment_celltype_v019_2=CL:1000507,2.66e-41,10;CL:1000494,2.66e-41,10;CL:1000449,5.01e-27,15;CL:1000497,1.15e-23,17;CL:0002518,1.15e-23,17;CL:0000239,4.73e-17,3;CL:1000615,4.73e-17,3;CL:0002306,4.73e-17,3;CL:0002681,2.27e-15,12;CL:0002584,2.27e-15,12;CL:0000039,8.74e-12,7;CL:0000586,8.74e-12,7;CL:0000066,2.56e-08,253;CL:0000182,2.35e-07,12;CL:0000223,3.05e-07,58|ontology_enrichment_development_v019=UBERON:0009117;1.00e-17;10!UBERON:0005564;1.00e-17;10!UBERON:0003104;3.70e-12;31!UBERON:0004161;6.85e-12;11!UBERON:0009497;5.08e-10;13|ontology_enrichment_disease=DOID:305!1.28e-14!106;DOID:0050687!1.57e-10!143;DOID:299!8.84e-08!25|ontology_enrichment_disease_v019=DOID:3493;5.23e-11;2!DOID:299;3.38e-09;25|ontology_enrichment_disease_v019_2=DOID:3493,4.49e-11,2;DOID:299,3.12e-09,25;DOID:305,8.93e-08,106|ontology_enrichment_uberon=UBERON:0009773!1.15e-16!12;UBERON:0001231!1.15e-16!12;UBERON:0004810!1.15e-16!12;UBERON:0000466!3.08e-13!126;UBERON:0006554!3.94e-13!44;UBERON:0006555!3.96e-13!17;UBERON:0005103!3.96e-13!17;UBERON:0000083!3.96e-13!17;UBERON:0009201!3.96e-13!17;UBERON:0004819!3.96e-13!17;UBERON:0006553!3.96e-13!17;UBERON:0003074!3.96e-13!17;UBERON:0003060!3.96e-13!17;UBERON:0003064!6.43e-13!37;UBERON:0001008!1.03e-12!45;UBERON:0000080!3.07e-12!18;UBERON:0002120!3.07e-12!18;UBERON:0004875!3.07e-12!18;UBERON:0005721!3.07e-12!18;UBERON:0005754!3.07e-12!18;UBERON:0007297!3.07e-12!18;UBERON:0003886!3.50e-12!63;UBERON:0004211!7.47e-12!16;UBERON:0001285!7.47e-12!16;UBERON:0007684!7.47e-12!16;UBERON:0003220!7.47e-12!16;UBERON:0004208!7.47e-12!16;UBERON:0003887!8.54e-12!21;UBERON:0002553!2.19e-11!70;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0004921!3.78e-11!129;UBERON:0004185!3.78e-11!129;UBERON:0000489!4.14e-11!32;UBERON:0004876!9.86e-11!20;UBERON:0000464!1.47e-10!104;UBERON:0002113!1.54e-10!27;UBERON:0003918!1.54e-10!27;UBERON:0005095!1.54e-10!27;UBERON:0007687!1.54e-10!27;UBERON:0003101!2.98e-10!22;UBERON:0000079!2.98e-10!22;UBERON:0005177!3.22e-10!107;UBERON:0001046!5.97e-10!19;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0005409!2.21e-09!35;UBERON:0000473!3.51e-09!8;UBERON:0000058!4.51e-09!26;UBERON:0003135!2.13e-08!11;UBERON:0000160!2.26e-08!27;UBERON:0004119!4.48e-08!169;UBERON:0000925!4.48e-08!169;UBERON:0006595!4.48e-08!169;UBERON:0006853!1.01e-07!3;UBERON:0007685!1.01e-07!3;UBERON:0004134!1.01e-07!3;UBERON:0001225!2.78e-07!13;UBERON:0008987!2.78e-07!13;UBERON:0004907!4.12e-07!5;UBERON:0000077!4.35e-07!130|ontology_enrichment_uberon_v019=UBERON:0004211;3.36e-41;10!UBERON:0009773;3.36e-41;10!UBERON:0001231;3.36e-41;10!UBERON:0004810;3.36e-41;10!UBERON:0006555;5.84e-27;15!UBERON:0004819;5.84e-27;15!UBERON:0001285;5.84e-27;15!UBERON:0007684;5.84e-27;15!UBERON:0002113;1.80e-24;24!UBERON:0011143;1.80e-24;24!UBERON:0000160;7.31e-22;17!UBERON:0005409;1.35e-20;22!UBERON:0000489;7.10e-20;29!UBERON:0006554;3.86e-19;30!UBERON:0001008;3.86e-19;30!UBERON:0006853;5.26e-17;3!UBERON:0007685;5.26e-17;3!UBERON:0004134;5.26e-17;3!UBERON:0000473;1.47e-15;8!UBERON:0001225;2.48e-15;12!UBERON:0008987;2.48e-15;12!UBERON:0005172;1.01e-14;52!UBERON:0005173;1.01e-14;52!UBERON:0001851;3.79e-12;15!UBERON:0000353;3.79e-12;15!UBERON:0004921;4.93e-12;33!UBERON:0000059;2.39e-11;11!UBERON:0003135;2.92e-11;11!UBERON:0002108;3.21e-10;4!UBERON:0004907;1.13e-09;5!UBERON:0002417;2.03e-09;58!UBERON:0000916;2.03e-09;58!UBERON:0001155;3.24e-09;9!UBERON:0000991;3.76e-08;21!UBERON:0003101;8.90e-08;22!UBERON:0000079;8.90e-08;22!UBERON:0002107;9.17e-07;19!UBERON:0006925;9.17e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.66e-41,10;UBERON:0004211,5.01e-27,15;UBERON:0009773,5.01e-27,15;UBERON:0001231,5.01e-27,15;UBERON:0001285,5.01e-27,15;UBERON:0007684,5.01e-27,15;UBERON:0004208,5.01e-27,15;UBERON:0006555,3.06e-25,16;UBERON:0004819,3.06e-25,16;UBERON:0002113,1.80e-22,26;UBERON:0003918,1.80e-22,26;UBERON:0011143,1.80e-22,26;UBERON:0005095,1.80e-22,26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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9414 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11828 | |||
|TSSclassifier=W | |||
|UniProt=B7Z2R3 | |||
|association_with_transcript=-283bp_to_NM_001170414_5end | |||
|coexpression_cluster_id=C4826 | |||
|description=CAGE_peak_6_at_TJP2_5end | |||
|id=chr9:71735882..71735896,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.15e-16!12;CL:1000494!1.15e-16!12;CL:0000066!2.61e-15!254;CL:1000449!7.47e-12!16;CL:1000497!2.95e-10!18;CL:0002518!2.95e-10!18;CL:0000039!3.07e-10!7;CL:0000586!3.07e-10!7;CL:0002322!3.76e-09!5;CL:0000239!1.01e-07!3;CL:1000615!1.01e-07!3;CL:0002306!1.01e-07!3;CL:0002681!2.78e-07!13;CL:0002584!2.78e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.36e-41;10!CL:1000494;3.36e-41;10!CL:1000449;5.84e-27;15!CL:1000497;1.32e-23;17!CL:0002518;1.32e-23;17!CL:0000239;5.26e-17;3!CL:1000615;5.26e-17;3!CL:0002306;5.26e-17;3!CL:0002681;2.48e-15;12!CL:0002584;2.48e-15;12!CL:0000039;8.61e-12;7!CL:0000586;8.61e-12;7!CL:0000182;2.25e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.66e-41,10;CL:1000494,2.66e-41,10;CL:1000449,5.01e-27,15;CL:1000497,1.15e-23,17;CL:0002518,1.15e-23,17;CL:0000239,4.73e-17,3;CL:1000615,4.73e-17,3;CL:0002306,4.73e-17,3;CL:0002681,2.27e-15,12;CL:0002584,2.27e-15,12;CL:0000039,8.74e-12,7;CL:0000586,8.74e-12,7;CL:0000066,2.56e-08,253;CL:0000182,2.35e-07,12;CL:0000223,3.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.00e-17;10!UBERON:0005564;1.00e-17;10!UBERON:0003104;3.70e-12;31!UBERON:0004161;6.85e-12;11!UBERON:0009497;5.08e-10;13 | |||
|ontology_enrichment_disease=DOID:305!1.28e-14!106;DOID:0050687!1.57e-10!143;DOID:299!8.84e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.23e-11;2!DOID:299;3.38e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.49e-11,2;DOID:299,3.12e-09,25;DOID:305,8.93e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.15e-16!12;UBERON:0001231!1.15e-16!12;UBERON:0004810!1.15e-16!12;UBERON:0000466!3.08e-13!126;UBERON:0006554!3.94e-13!44;UBERON:0006555!3.96e-13!17;UBERON:0005103!3.96e-13!17;UBERON:0000083!3.96e-13!17;UBERON:0009201!3.96e-13!17;UBERON:0004819!3.96e-13!17;UBERON:0006553!3.96e-13!17;UBERON:0003074!3.96e-13!17;UBERON:0003060!3.96e-13!17;UBERON:0003064!6.43e-13!37;UBERON:0001008!1.03e-12!45;UBERON:0000080!3.07e-12!18;UBERON:0002120!3.07e-12!18;UBERON:0004875!3.07e-12!18;UBERON:0005721!3.07e-12!18;UBERON:0005754!3.07e-12!18;UBERON:0007297!3.07e-12!18;UBERON:0003886!3.50e-12!63;UBERON:0004211!7.47e-12!16;UBERON:0001285!7.47e-12!16;UBERON:0007684!7.47e-12!16;UBERON:0003220!7.47e-12!16;UBERON:0004208!7.47e-12!16;UBERON:0003887!8.54e-12!21;UBERON:0002553!2.19e-11!70;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0004921!3.78e-11!129;UBERON:0004185!3.78e-11!129;UBERON:0000489!4.14e-11!32;UBERON:0004876!9.86e-11!20;UBERON:0000464!1.47e-10!104;UBERON:0002113!1.54e-10!27;UBERON:0003918!1.54e-10!27;UBERON:0005095!1.54e-10!27;UBERON:0007687!1.54e-10!27;UBERON:0003101!2.98e-10!22;UBERON:0000079!2.98e-10!22;UBERON:0005177!3.22e-10!107;UBERON:0001046!5.97e-10!19;UBERON:0001007!1.08e-09!155;UBERON:0001555!1.08e-09!155;UBERON:0007026!1.08e-09!155;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0005409!2.21e-09!35;UBERON:0000473!3.51e-09!8;UBERON:0000058!4.51e-09!26;UBERON:0003135!2.13e-08!11;UBERON:0000160!2.26e-08!27;UBERON:0004119!4.48e-08!169;UBERON:0000925!4.48e-08!169;UBERON:0006595!4.48e-08!169;UBERON:0006853!1.01e-07!3;UBERON:0007685!1.01e-07!3;UBERON:0004134!1.01e-07!3;UBERON:0001225!2.78e-07!13;UBERON:0008987!2.78e-07!13;UBERON:0004907!4.12e-07!5;UBERON:0000077!4.35e-07!130 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.73217913656106,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76812917713084,0,0.0920809889358963,0,0,0,2.25599806453706,8.24064107017238,7.0591479225917,4.38417673959782,3.79985864014353,0,0.170093705276516,0,0,1.89662506280697,0,20.3901018436031,9.97291210714469,4.70136984916574,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29848107592057,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0.251932747854276,0,0,0,0.269605053441981,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.359030577639089,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,4.24059214301822,0,0,3.71521770914025,2.4441205797345,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,3.9845336444171,0,0.173559738335131,0,0.174118413160805,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0.432271251462318,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3986051452454,22.0874500461526,27.2984352609449,1.18112977817699,0.169346664131569,0,0,0,0.275078873194468,0,0,0,0,0,3.78267395036151,11.2252818608896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0.39246546425257,0,2.5224494698241,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,4.3623618401139,1.96300467230486,3.77945567445035,0,0,0,0,0,0,0,0.79062257427272,0,0.150962843566674,6.09675849052763,7.43102505713455,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,4.2322147241232,0,0,0,0,0,0,2.14176542458162,1.3360870263278,2.57305718697566,6.016980943017,0.682008283964155,1.60778478093707,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,1.61685363791856,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@TJP2 | |||
}} |
Revision as of 09:15, 14 September 2013
Short description: | p6@TJP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TJP2_5end |
Coexpression cluster: | C4826_hepatocellular_Renal_kidney_adenocarcinoma_Intestinal_small_Prostate |
Association with transcript: | -283bp_to_NM_001170414_5end |
EntrezGene: | TJP2 |
HGNC: | 11828 |
UniProt: | B7Z2R3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.66e-41 | 10 |
nephron tubule epithelial cell | 2.66e-41 | 10 |
epithelial cell of nephron | 5.01e-27 | 15 |
kidney cell | 1.15e-23 | 17 |
kidney epithelial cell | 1.15e-23 | 17 |
brush border epithelial cell | 4.73e-17 | 3 |
kidney cortex tubule cell | 4.73e-17 | 3 |
epithelial cell of proximal tubule | 4.73e-17 | 3 |
kidney cortical cell | 2.27e-15 | 12 |
renal cortical epithelial cell | 2.27e-15 | 12 |
germ line cell | 8.74e-12 | 7 |
germ cell | 8.74e-12 | 7 |
epithelial cell | 2.56e-08 | 253 |
hepatocyte | 2.35e-07 | 12 |
endodermal cell | 3.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.49e-11 | 2 |
adenocarcinoma | 3.12e-09 | 25 |
carcinoma | 8.93e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.