FFCP PHASE1:Hg19::chr9:132934700..132934718,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3953 | |||
|TSSclassifier=S | |||
|UniProt=P62166 | |||
|association_with_transcript=-138bp_to_ENST00000372398,NM_014286,uc004bzi.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NCS1_5end | |||
|id=chr9:132934700..132934718,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.53e-15!180;CL:0000220!2.81e-14!246;CL:0002321!9.09e-14!248;CL:0000222!5.31e-11!119;CL:0000183!1.34e-09!59;CL:0000680!3.61e-09!57;CL:0000056!3.61e-09!57;CL:0000355!3.61e-09!57;CL:0000187!1.48e-08!54;CL:0000393!1.52e-08!60;CL:0000211!1.52e-08!60;CL:0000192!3.30e-08!42;CL:0000514!3.30e-08!42;CL:0000221!2.86e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p2@NCS1 | |||
}} |
Revision as of 07:50, 14 September 2013
Short description: | p2@NCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NCS1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -138bp_to_ENST00000372398, NM_014286, uc004bzi.2_5end |
EntrezGene: | NCS1 |
HGNC: | 3953 |
UniProt: | P62166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.53e-13 | 250 |
mesodermal cell | 8.58e-11 | 121 |
muscle precursor cell | 9.49e-09 | 58 |
myoblast | 9.49e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-09 | 58 |
muscle cell | 3.95e-08 | 55 |
electrically responsive cell | 6.99e-08 | 61 |
electrically active cell | 6.99e-08 | 61 |
smooth muscle cell | 7.50e-08 | 43 |
smooth muscle myoblast | 7.50e-08 | 43 |
ectodermal cell | 3.41e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.