FFCP PHASE1:Hg19::chr10:17271866..17271897,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=85bp_to_uc001iot.1_5end | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_5_at_uc001iot.1_5end | |||
|id=chr10:17271866..17271897,- | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-29!180;CL:0002371!1.50e-29!591;CL:0000144!2.79e-26!625;CL:0000048!3.27e-22!430;CL:0000723!1.20e-20!436;CL:0000057!6.55e-19!75;CL:0000034!1.97e-18!444;CL:0000548!1.24e-17!679;CL:0000004!1.24e-17!679;CL:0000255!1.24e-17!679;CL:0000222!7.89e-17!119;CL:0000012!1.13e-16!682;CL:0002320!1.38e-12!365;CL:0000183!1.66e-12!59;CL:0000680!7.82e-12!57;CL:0000056!7.82e-12!57;CL:0000355!7.82e-12!57;CL:0000187!9.67e-12!54;CL:0000003!2.60e-11!722;CL:0000134!5.95e-11!358;CL:0000219!8.54e-11!390;CL:0000192!1.74e-10!42;CL:0000514!1.74e-10!42;CL:0000393!9.59e-10!60;CL:0000211!9.59e-10!60;CL:0000359!9.37e-09!32;CL:0002620!1.14e-08!23;CL:0002057!8.80e-08!42;CL:0002139!2.74e-07!24;CL:0000071!5.80e-07!18;CL:0002546!5.80e-07!18;CL:0002078!7.53e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.55e-10;23!CL:0000359;7.21e-09;32!CL:0000192;1.30e-08;43!CL:0000057;2.81e-08;73!CL:0000860;3.01e-08;33!CL:0002057;3.01e-08;33!CL:0000071;1.36e-07;18!CL:0000187;1.47e-07;55!CL:0002139;1.54e-07;24!CL:0000473;4.87e-07;39!CL:0000234;4.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.15e-24,427;CL:0000723,1.10e-22,433;CL:0000034,7.10e-21,441;CL:0000057,3.94e-20,76;CL:0000222,5.32e-16,121;CL:0002320,1.97e-13,361;CL:0000187,3.88e-13,55;CL:0000680,4.06e-13,58;CL:0000056,4.06e-13,58;CL:0000355,4.06e-13,58;CL:0000134,9.46e-12,354;CL:0000192,1.03e-11,43;CL:0000514,1.03e-11,43;CL:0000219,5.34e-11,386;CL:0000393,6.77e-11,61;CL:0000211,6.77e-11,61;CL:0002620,1.29e-09,23;CL:0000359,2.57e-09,32;CL:0002139,8.71e-08,24;CL:0000071,8.71e-08,18;CL:0002546,8.71e-08,18;CL:0002321,7.32e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.30e-08;43!CL:0002546;1.36e-07;18!CL:0000355;4.55e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.20e-17!167;UBERON:0000914!3.04e-16!83;UBERON:0002329!3.04e-16!83;UBERON:0003077!3.04e-16!83;UBERON:0003059!3.04e-16!83;UBERON:0007282!3.04e-16!83;UBERON:0009618!3.04e-16!83;UBERON:0007285!3.04e-16!83;UBERON:0002049!3.66e-16!79;UBERON:0007798!3.66e-16!79;UBERON:0003081!1.45e-15!216;UBERON:0004290!3.92e-15!70;UBERON:0000055!1.39e-14!69;UBERON:0004535!3.80e-14!110;UBERON:0001981!4.36e-14!60;UBERON:0007500!4.36e-14!60;UBERON:0004537!4.36e-14!60;UBERON:0006965!4.36e-14!60;UBERON:0001637!1.23e-13!42;UBERON:0003509!1.23e-13!42;UBERON:0004572!1.23e-13!42;UBERON:0004872!2.74e-13!84;UBERON:0001009!4.58e-13!113;UBERON:0002384!1.74e-12!375;UBERON:0000926!2.29e-12!448;UBERON:0004120!2.29e-12!448;UBERON:0006603!2.29e-12!448;UBERON:0000486!5.21e-12!82;UBERON:0001134!3.71e-11!61;UBERON:0002036!3.71e-11!61;UBERON:0003082!3.71e-11!61;UBERON:0004573!1.64e-10!33;UBERON:0004571!1.64e-10!33;UBERON:0002385!2.15e-10!63;UBERON:0001015!2.15e-10!63;UBERON:0000383!2.15e-10!63;UBERON:0003914!5.27e-08!118;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0001013!1.75e-07!14;UBERON:0000947!1.85e-07!21;UBERON:0010191!1.85e-07!21;UBERON:0005256!4.43e-07!143;UBERON:0001986!5.80e-07!18;UBERON:0004638!5.80e-07!18;UBERON:0004852!5.80e-07!18;UBERON:0006914!8.50e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.20e-12;42!UBERON:0003509;9.20e-12;42!UBERON:0004572;9.20e-12;42!UBERON:0004573;1.36e-10;33!UBERON:0004571;1.36e-10;33!UBERON:0007500;4.55e-10;56!UBERON:0001981;4.55e-10;56!UBERON:0004537;4.55e-10;56!UBERON:0002049;1.84e-08;75!UBERON:0007798;1.84e-08;75!UBERON:0000947;1.86e-08;21!UBERON:0010191;1.86e-08;21!UBERON:0001013;2.26e-08;14!UBERON:0000055;6.76e-08;65!UBERON:0004638;1.36e-07;18!UBERON:0001986;1.36e-07;18!UBERON:0004852;1.36e-07;18!UBERON:0003914;1.70e-07;74!UBERON:0002067;6.51e-07;9!UBERON:0006914;7.28e-07;25!UBERON:0002384;8.88e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.30e-22,315;UBERON:0004120,2.30e-22,315;UBERON:0006603,2.30e-22,315;UBERON:0002204,1.19e-18,167;UBERON:0007503,2.21e-17,78;UBERON:0002049,1.35e-16,78;UBERON:0007798,1.35e-16,78;UBERON:0007524,2.51e-16,73;UBERON:0002329,2.76e-16,71;UBERON:0003059,2.76e-16,71;UBERON:0007282,2.76e-16,71;UBERON:0004290,2.76e-16,71;UBERON:0009618,2.76e-16,71;UBERON:0003077,9.39e-16,72;UBERON:0007285,9.39e-16,72;UBERON:0007500,2.07e-15,59;UBERON:0001981,2.07e-15,59;UBERON:0004537,2.07e-15,59;UBERON:0006965,2.07e-15,59;UBERON:0001637,2.70e-15,42;UBERON:0003509,2.70e-15,42;UBERON:0004572,2.70e-15,42;UBERON:0000055,3.30e-15,68;UBERON:0003081,2.02e-14,203;UBERON:0004872,5.31e-14,83;UBERON:0002384,2.66e-13,371;UBERON:0004535,3.36e-13,109;UBERON:0000486,8.84e-13,83;UBERON:0001009,3.49e-12,112;UBERON:0001134,1.20e-11,62;UBERON:0002036,1.20e-11,62;UBERON:0003082,1.20e-11,62;UBERON:0004573,1.61e-11,33;UBERON:0004571,1.61e-11,33;UBERON:0000490,2.30e-11,148;UBERON:0002385,9.24e-11,64;UBERON:0001015,9.24e-11,64;UBERON:0000383,9.24e-11,64;UBERON:0002199,1.24e-09,46;UBERON:0002416,1.24e-09,46;UBERON:0003914,1.48e-09,117;UBERON:0001013,8.53e-09,14;UBERON:0000947,2.50e-08,21;UBERON:0010191,2.50e-08,21;UBERON:0004638,8.71e-08,18;UBERON:0001986,8.71e-08,18;UBERON:0004852,8.71e-08,18;UBERON:0003104,2.00e-07,160;UBERON:0009142,2.00e-07,160;UBERON:0001434,2.26e-07,100;UBERON:0002097,3.11e-07,41;UBERON:0005256,3.34e-07,122;UBERON:0002067,3.95e-07,9;UBERON:0004016,3.95e-07,9;UBERON:0010083,3.95e-07,9;UBERON:0006914,4.76e-07,25 | |||
|phase1_expression=2.90685406832891,2.14100523890983,1.12763523276777,3.00219895059391,3.5756887554183,2.61701557230111,10.1319951267324,3.79031924056099,3.91778442299758,0.982935746006035,0.697801167972428,0.436882744260345,1.58260186937072,4.20805600064159,10.9361133990212,3.36162573225888,0.602694528023977,2.19093027116212,2.43966399395253,1.23121058076788,4.48801520737357,7.52291331547411,4.00730381983479,6.43309797842556,6.02604670055053,0,0.0821005894499457,0,0,0.383829398097213,1.70297735647684,0,0.30120591877825,0,0,0,0,0.553995408531877,2.60707781711184,3.68918480216948,0.447830948479849,0.647787332037959,0.515151135268373,4.07115068582781,1.51150377475524,0.970336244751265,3.71886459049095,3.70051099219643,4.64559556342655,3.74000110018796,2.30544635876191,3.54723344832878,5.5159308917859,3.22742341791913,4.06279459783025,3.57660445130949,3.82068610080984,2.02251136000576,5.81559395504715,1.28371610830437,7.03270838378945,3.29851300186716,0.997318288108159,1.70489900213078,9.28669563611469,7.37600792098482,1.86846674698672,5.52747063564835,3.65038042894141,1.95469960234605,9.08099253950053,1.84138817993782,2.21523671208619,0.422510572623884,0.637812899895131,0.628975936525128,1.34794357375794,0.901061357049038,0.803627933485401,0,0.39783335439818,0.182664153764634,0,1.09227722252426,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0.443067789167242,0.541607727530031,0.640456598628376,0.260118695119756,1.15106533222573,0.552700035571697,0.579606171470105,0.593146252648242,0.535081656179426,0,0.566546713487831,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0.236777252044017,0,1.41124720257313,2.13952156626806,0.579297615531196,0,1.34140171940727,1.40648818027883,9.39741796199872,4.51204119572301,6.51809335323707,0,3.40644409211845,4.06499713805492,5.32150553910154,5.62142628436007,0.130979075497713,0,0,3.57002133020152,2.08955684759121,6.51494006542439,0.238490624305342,1.14398982156026,0.371457501329565,1.78886166630035,5.16140757063675,3.12426451446835,4.52246353539208,5.03399323451887,6.60283300656162,2.71693456497854,2.58416759169329,1.77883131343355,0.66944122552934,6.8480983908555,2.28081631715554,4.63717909341522,3.30896772311282,5.67099363517232,0.535798369704479,1.79623498100936,2.36484109014977,4.5994991239765,2.84779697870439,5.49605231791222,0,0,0,3.97577561356255,3.54565432660823,3.31022952033047,4.58938593198102,4.25602058638028,2.24271040056923,4.2699598291882,3.94668077467456,0.622422070799533,3.23305612967251,3.75962377160955,0.454072282934794,5.18558332031999,0.468642863667593,6.86752169026705,1.71141546463335,11.5075484024887,3.99277295388801,4.85618833104395,6.03938468819669,2.44985005505872,6.5102188175237,4.33968280938215,3.56400857184616,6.18167323196392,0.910161361938026,1.43723628363248,3.70339450698946,4.00379263590285,0.277064115484183,4.38977620880838,10.7270728529657,4.6573798261045,2.49550802952046,6.09924761342131,2.98980344345994,2.11931901159562,9.30282397861647,1.44273540933814,9.27505944164265,3.35010341396862,4.89451363499672,1.65642908774038,14.1362913576704,3.03764665519588,0.969876340912871,5.32514388774922,2.01504196455281,4.0694542154517,0.57978255948989,0,0.286804595389004,0.243947412259191,0,0,0.518305275076852,0,0,6.25798129319264,12.8648187638577,8.28809528114883,2.3218396401599,8.66255378003503,0.946454400318751,0.168584690078102,0,0.882351781859152,0.435758888184812,0.474541238222193,0.808987848960987,0.392442930250692,0,2.21446636387394,0,1.6462960453256,4.41026134156626,0,0,0.590789906681404,0.882926198829301,0,1.54411029268673,0.439001141634502,0,0.100528972411631,0.0925884451585296,1.62904152655162,6.23960871167747,0,4.17349457910277,1.17408694235822,1.73239737313289,1.38895653772983,3.04406643575357,0,0,0.738651018262192,2.10603838625314,5.94524649154913,0,0.503946384596579,0,1.52249488594842,0.581267877027924,3.06706143332169,0,0.176096868026452,1.65862492432618,1.00883967391873,0.50496973370552,0.571481048629521,0,0,5.13217338068116,1.43958489784653,0.600686115687835,1.42913216315289,0.448524337381443,0.87192013766656,0.51336800074665,2.58543431515556,7.15312891703765,6.762422020448,2.12750493267896,6.24044621468197,2.05765899409714,2.83698264046557,3.19706614819319,1.57275793023962,0,2.46972101034231,3.58309802723109,0.710783897485092,1.58390374586686,3.31583314765545,0.871533458600294,1.59956785891291,0,0.502257091432126,4.21667878966063,1.91699884393266,4.59447743336456,2.85273810081437,1.88215698667853,3.49309748335652,0.358121926479791,0.448340575974109,0.197030760201927,0.862510299438069,0.77005821767849,0.508189248444927,1.30139853857622,2.31986643833309,0.837581326671744,0,0,0,0.414415513436035,3.0672872929785,5.50187573165645,6.23909554509392,3.95144636908534,4.10386674233472,3.46945313074656,2.45996971484698,1.80567659836631,2.27407504055985,8.2778457034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| |||
|short_description=p5@uc001iot.1 | |||
}} |
Revision as of 01:57, 11 January 2014
Short description: | p5@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 85bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.15e-24 | 427 |
somatic stem cell | 1.10e-22 | 433 |
stem cell | 7.10e-21 | 441 |
fibroblast | 3.94e-20 | 76 |
mesodermal cell | 5.32e-16 | 121 |
connective tissue cell | 1.97e-13 | 361 |
muscle cell | 3.88e-13 | 55 |
muscle precursor cell | 4.06e-13 | 58 |
myoblast | 4.06e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.06e-13 | 58 |
mesenchymal cell | 9.46e-12 | 354 |
smooth muscle cell | 1.03e-11 | 43 |
smooth muscle myoblast | 1.03e-11 | 43 |
motile cell | 5.34e-11 | 386 |
electrically responsive cell | 6.77e-11 | 61 |
electrically active cell | 6.77e-11 | 61 |
skin fibroblast | 1.29e-09 | 23 |
vascular associated smooth muscle cell | 2.57e-09 | 32 |
endothelial cell of vascular tree | 8.71e-08 | 24 |
blood vessel endothelial cell | 8.71e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.71e-08 | 18 |
embryonic cell | 7.32e-07 | 250 |