FFCP PHASE1:Hg19::chr10:8091813..8091823,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr10:8091813..8091823,+ | |||
|id=chr10:8091813..8091823,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.16e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.30e-08;3!CL:0002327;7.27e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.51e-08,3;CL:0002327,7.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.67e-23;1 | |||
|ontology_enrichment_disease=DOID:5093!2.65e-19!4;DOID:1612!2.65e-19!4;DOID:0050687!8.96e-12!143;DOID:299!4.91e-10!25;DOID:4929!1.85e-09!2;DOID:3095!8.53e-09!22;DOID:2994!8.53e-09!22;DOID:305!6.13e-08!106;DOID:169!6.03e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-88;4!DOID:1612;1.46e-88;4!DOID:7;2.37e-11;39!DOID:299;1.09e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.46e-88,4;DOID:1612,1.46e-88,4;DOID:7,2.07e-14,39;DOID:299,1.09e-08,25;DOID:305,1.65e-07,106;DOID:0050687,2.02e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003124!5.62e-16!7;UBERON:0005631!7.73e-15!14;UBERON:0000158!7.73e-15!14;UBERON:0006947!2.65e-14!3;UBERON:0004054!2.65e-14!3;UBERON:0000476!3.16e-14!3;UBERON:0000920!3.16e-14!3;UBERON:0005904!7.68e-11!4;UBERON:0002394!1.38e-10!4;UBERON:0003928!1.38e-10!4;UBERON:0002294!2.49e-10!7;UBERON:0001173!2.49e-10!7;UBERON:0004912!2.49e-10!7;UBERON:0000013!2.97e-08!5;UBERON:0002410!2.97e-08!5;UBERON:0000478!3.08e-08!24;UBERON:0000310!9.90e-08!10;UBERON:0000058!2.21e-07!26;UBERON:0004923!4.28e-07!57;UBERON:0001443!5.03e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.31e-36;10!UBERON:0001443;1.17e-32;11!UBERON:0001000;4.10e-23;1!UBERON:0005352;4.10e-23;1!UBERON:0000058;1.01e-09;10!UBERON:0003124;1.30e-08;3!UBERON:0000920;1.30e-08;3!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0000915;1.77e-07;52!UBERON:0001911;7.27e-07;4!UBERON:0002394;9.10e-07;4!UBERON:0005904;9.10e-07;4!UBERON:0003928;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.31e-36,10;UBERON:0001443,1.17e-32,11;UBERON:0001000,2.62e-23,1;UBERON:0005352,2.62e-23,1;UBERON:0006947,1.12e-08,3;UBERON:0004054,1.12e-08,3;UBERON:0000920,1.51e-08,3;UBERON:0000915,3.07e-07,52;UBERON:0001911,7.27e-07,4;UBERON:0005333,7.27e-07,4;UBERON:0008425,7.27e-07,4;UBERON:0005311,7.27e-07,4;UBERON:0005904,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11183958163348,6.00940313466411,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,1.61119057208048,0,0,0,0,0,0,0,2.86470537193757,5.42251999976413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38338342632836,0.179515288819544,0.217294743844016,0.957003479195758,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,1.97292201424695,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0.255788742607303,0.107824811396682,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,1.64708051314868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:8091813..8091823,+ | |||
}} |
Revision as of 01:38, 11 January 2014
Short description: | p@chr10:8091813..8091823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8091813..8091823, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
mammary gland epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 7.31e-36 | 10 |
chest | 1.17e-32 | 11 |
vas deferens | 2.62e-23 | 1 |
spermatic cord | 2.62e-23 | 1 |
male genital duct | 1.12e-08 | 3 |
internal male genitalia | 1.12e-08 | 3 |
egg chorion | 1.51e-08 | 3 |
thoracic segment of trunk | 3.07e-07 | 52 |
mammary gland | 7.27e-07 | 4 |
mammary bud | 7.27e-07 | 4 |
mammary ridge | 7.27e-07 | 4 |
mammary placode | 7.27e-07 | 4 |
duct of male reproductive system | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.46e-88 | 4 |
breast cancer | 1.46e-88 | 4 |
disease of anatomical entity | 2.07e-14 | 39 |
adenocarcinoma | 1.09e-08 | 25 |
carcinoma | 1.65e-07 | 106 |
cell type cancer | 2.02e-07 | 143 |