FFCP PHASE1:Hg19::chr11:13298943..13298955,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-265bp_to_CR749855_5end | |||
|description=CAGE_peak_1_at_CR749855_5end | |||
|id=chr11:13298943..13298955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.85e-21;3!CL:0002127;8.48e-08;1!CL:0000911;8.48e-08;1!CL:0000895;8.48e-08;1!CL:0000319;8.48e-08;1!CL:0000814;8.48e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.94e-21,3;CL:0000825,6.94e-21,3;CL:0000893,8.60e-14,2;CL:0002489,8.60e-14,2;CL:0000809,8.60e-14,2;CL:0000808,8.60e-14,2;CL:0000894,8.60e-14,2;CL:0000806,8.60e-14,2;CL:0000807,8.60e-14,2;CL:0000805,8.60e-14,2;CL:0002425,8.60e-14,2;CL:0000810,5.33e-08,1;CL:0000895,5.33e-08,1;CL:0002436,5.33e-08,1;CL:0002427,5.33e-08,1;CL:0002428,5.33e-08,1;CL:0002429,5.33e-08,1;CL:0002433,5.33e-08,1;CL:0002431,5.33e-08,1;CL:0002432,5.33e-08,1;CL:0000319,6.10e-08,1;CL:0002127,1.75e-07,1;CL:0000914,1.75e-07,1;CL:0000911,1.75e-07,1;CL:0000814,1.75e-07,1;CL:0002042,1.75e-07,1;CL:0002039,1.75e-07,1;CL:0002040,1.75e-07,1;CL:0002041,1.75e-07,1;CL:0000838,6.06e-07,52;CL:0000542,8.61e-07,53;CL:0000051,8.61e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002425;6.57e-14;2!CL:0002427;8.48e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;8.48e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0001017!1.76e-11!82;UBERON:0000955!3.58e-11!69;UBERON:0006238!3.58e-11!69;UBERON:0005743!1.06e-10!86;UBERON:0002616!1.94e-10!59;UBERON:0002780!5.24e-10!41;UBERON:0001890!5.24e-10!41;UBERON:0006240!5.24e-10!41;UBERON:0003080!1.62e-09!42;UBERON:0000073!4.66e-09!94;UBERON:0001016!4.66e-09!94;UBERON:0001893!1.38e-08!34;UBERON:0002020!1.70e-08!34;UBERON:0003528!1.70e-08!34;UBERON:0001869!2.06e-08!32;UBERON:0001950!2.86e-08!20;UBERON:0002619!3.11e-08!22;UBERON:0000956!3.65e-08!25;UBERON:0000203!3.65e-08!25;UBERON:0002791!4.29e-08!33;UBERON:0002346!4.59e-08!90;UBERON:0003075!9.60e-08!86;UBERON:0007284!9.60e-08!86;UBERON:0000153!2.67e-07!129;UBERON:0007811!2.67e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.12e-15,4;UBERON:0005058,2.12e-15,4;UBERON:0009113,2.12e-15,4;UBERON:0003295,2.12e-15,4;UBERON:0005562,2.12e-15,4;UBERON:0003351,1.93e-10,6;UBERON:0009722,1.10e-09,11;UBERON:0007690,1.10e-09,11;UBERON:0004177,5.13e-09,7;UBERON:0005057,5.13e-09,7 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0.376627918784408,0.305653622991805,0.656804715599566,0.236132343941038,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0,0.398927315243264,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.786839080455332,0.393010762749165,1.64481199199607,0,0.651844533267181,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0.267540828089713,0,0.226618685395132,1.53288197440768,1.03088233644789,0,0.637130828648193,0,0,0.150575119077773,0,0,0.236777252044017,0,0.80642697289893,1.87208137048455,0.724122019413995,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.723280468230358,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,2.07328115540772,0.864719720501769,1.00993946741104,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,1.00876629594175,3.15249216323084,3.45004119775228,1.28343036279748,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.862856803274467,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,1.00299045849731,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.222617410045812,0,0.63337622438398,0.19924798825107,0,0.503865495708552,0.409074730008619,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,1.93866549219044,0.463840490809256,0,0,0,0,0.227586896570999,0,0,1.03423011972439,0.291604613383254,0,0,0.361789315876224,1.52581736317083,0.221158519862449,0.886642856860642,0.219385397153973,0.10893846351899,0.139423744278603,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.282706142867882,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0,0.978323094660449,0,0,1.20990716048664,0.30607276163049,0,0.450970258243478,0.207376382794494,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.391969589657511,0.174118413160805,0,0.171986032471617,0,0.146178634172371,0.164230914106418,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.569797163602908,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0.432164393964449,0,0.471388069233591,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,1.28767814440971,0.223171457441873,0.201550417460179,0,1.16495949527454,0.0787831823072236,0,0,0,0.423366660328922,0,0.681017030557878,0.321506296930038,0.550157746388935,0.415440338029185,0.449947783103001,0,0.668245123238271,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0,0,0,0.592834895693833,0.121792598380896,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| |||
|short_description=p1@CR749855 | |||
}} |
Revision as of 06:41, 11 January 2014
Short description: | p1@CR749855 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CR749855_5end |
Coexpression cluster: | NA |
Association with transcript: | -265bp_to_CR749855_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.12e-15 | 4 |
hemolymphoid system gland | 2.12e-15 | 4 |
thymic region | 2.12e-15 | 4 |
pharyngeal gland | 2.12e-15 | 4 |
thymus primordium | 2.12e-15 | 4 |
pharyngeal epithelium | 1.93e-10 | 6 |
entire pharyngeal arch endoderm | 1.10e-09 | 11 |
early pharyngeal endoderm | 1.10e-09 | 11 |
hemopoietic organ | 5.13e-09 | 7 |
immune organ | 5.13e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.10e-08 | 1 |