FFCP PHASE1:Hg19::chr13:28552795..28552806,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1705 | |||
|description=CAGE_peak_at_chr13:28552795..28552806,- | |||
|id=chr13:28552795..28552806,- | |||
|ontology_enrichment_celltype=CL:0002563!1.75e-12!4;CL:0002322!4.73e-10!5;CL:0002253!4.98e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.97e-19;1!UBERON:0000358;4.69e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.82e-41!27;UBERON:0000059!2.92e-38!11;UBERON:0005409!3.79e-38!35;UBERON:0001155!1.23e-32!9;UBERON:0004907!1.04e-21!5;UBERON:0004921!1.40e-13!129;UBERON:0004185!1.40e-13!129;UBERON:0001154!4.23e-13!1;UBERON:0001153!4.23e-13!1;UBERON:0001052!1.03e-12!4;UBERON:0001242!1.75e-12!4;UBERON:0001262!1.75e-12!4;UBERON:0004786!1.75e-12!4;UBERON:0004808!1.75e-12!4;UBERON:0001277!1.75e-12!4;UBERON:0001007!5.08e-11!155;UBERON:0001555!5.08e-11!155;UBERON:0007026!5.08e-11!155;UBERON:0003350!3.59e-10!5;UBERON:0001046!4.31e-10!19;UBERON:0004119!5.79e-10!169;UBERON:0000925!5.79e-10!169;UBERON:0006595!5.79e-10!169;UBERON:0002108!9.07e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.41e-63;17!UBERON:0005409;9.96e-50;22!UBERON:0000059;4.23e-41;11!UBERON:0002108;3.27e-33;4!UBERON:0001155;2.06e-32;9!UBERON:0004921;7.50e-29;33!UBERON:0001154;2.97e-19;1!UBERON:0001153;2.97e-19;1!UBERON:0009854;2.97e-19;1!UBERON:0004907;1.81e-15;5!UBERON:0001555;2.05e-11;54!UBERON:0001007;7.09e-10;81!UBERON:0002114;2.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-63,17;UBERON:0005409,5.86e-44,25;UBERON:0000059,4.99e-41,11;UBERON:0002108,2.78e-33,4;UBERON:0001155,2.42e-32,9;UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1;UBERON:0004907,2.02e-15,5;UBERON:0004921,9.58e-12,118;UBERON:0001007,1.87e-09,145;UBERON:0001555,1.87e-09,145;UBERON:0007026,1.87e-09,145;UBERON:0004119,1.64e-08,160;UBERON:0000925,1.64e-08,160;UBERON:0006595,1.64e-08,160;UBERON:0002114,2.47e-07,2;UBERON:0011216,2.78e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,12.9384051040206,3.36138745112689,19.552964637876,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2938803290032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.190252925652,20.326039126868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr13:28552795..28552806,- | |||
}} |
Revision as of 17:05, 11 January 2014
Short description: | p@chr13:28552795..28552806, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28552795..28552806, - |
Coexpression cluster: | C1705_rectal_small_colon_temporal_duodenum_hepatoblastoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-63 | 17 |
gastrointestinal system | 5.86e-44 | 25 |
large intestine | 4.99e-41 | 11 |
small intestine | 2.78e-33 | 4 |
colon | 2.42e-32 | 9 |
vermiform appendix | 3.91e-19 | 1 |
caecum | 3.91e-19 | 1 |
midgut | 3.91e-19 | 1 |
lower digestive tract | 2.02e-15 | 5 |
subdivision of digestive tract | 9.58e-12 | 118 |
digestive system | 1.87e-09 | 145 |
digestive tract | 1.87e-09 | 145 |
primitive gut | 1.87e-09 | 145 |
endoderm-derived structure | 1.64e-08 | 160 |
endoderm | 1.64e-08 | 160 |
presumptive endoderm | 1.64e-08 | 160 |
duodenum | 2.47e-07 | 2 |
organ system subdivision | 2.78e-07 | 223 |