FFCP PHASE1:Hg19::chr16:57980435..57980443,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr16:57980435..57980443,- | |||
|id=chr16:57980435..57980443,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.51e-53;5!CL:0002321;1.08e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!7.87e-16!6;DOID:171!1.01e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.09e-44;6!DOID:171;2.22e-27;10!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-44,6;DOID:171,2.38e-27,10;DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.58e-24!94;UBERON:0001016!6.58e-24!94;UBERON:0001049!5.23e-19!57;UBERON:0005068!5.23e-19!57;UBERON:0006241!5.23e-19!57;UBERON:0007135!5.23e-19!57;UBERON:0000013!7.16e-19!5;UBERON:0002410!7.16e-19!5;UBERON:0000349!2.38e-18!5;UBERON:0001017!5.45e-18!82;UBERON:0007023!4.16e-17!115;UBERON:0005743!4.40e-17!86;UBERON:0002616!4.53e-15!59;UBERON:0003075!1.32e-14!86;UBERON:0007284!1.32e-14!86;UBERON:0000988!2.59e-14!3;UBERON:0001869!5.43e-14!32;UBERON:0002346!6.98e-14!90;UBERON:0002020!3.52e-13!34;UBERON:0003528!3.52e-13!34;UBERON:0001893!3.73e-13!34;UBERON:0000955!1.61e-12!69;UBERON:0006238!1.61e-12!69;UBERON:0004121!1.98e-12!169;UBERON:0000924!4.32e-12!173;UBERON:0006601!4.32e-12!173;UBERON:0001871!5.94e-12!7;UBERON:0002298!7.99e-12!8;UBERON:0001154!1.60e-11!1;UBERON:0001153!1.60e-11!1;UBERON:0002022!2.96e-11!1;UBERON:0003112!3.28e-11!1;UBERON:0000032!3.28e-11!1;UBERON:0005253!3.28e-11!1;UBERON:0003128!3.28e-11!1;UBERON:0002241!3.28e-11!1;UBERON:0001703!3.28e-11!1;UBERON:0004761!3.28e-11!1;UBERON:0009617!3.28e-11!1;UBERON:0007190!5.43e-11!1;UBERON:0001882!6.00e-11!1;UBERON:0005403!6.00e-11!1;UBERON:0003076!6.93e-11!15;UBERON:0003057!6.93e-11!15;UBERON:0002780!7.51e-11!41;UBERON:0001890!7.51e-11!41;UBERON:0006240!7.51e-11!41;UBERON:0002619!8.93e-11!22;UBERON:0000010!9.64e-11!8;UBERON:0003080!1.39e-10!42;UBERON:0002791!4.08e-10!33;UBERON:0000956!1.62e-09!25;UBERON:0000203!1.62e-09!25;UBERON:0004907!3.67e-09!5;UBERON:0004733!4.69e-08!12;UBERON:0002028!4.69e-08!12;UBERON:0007277!4.69e-08!12;UBERON:0000033!6.16e-08!123;UBERON:0001950!7.14e-08!20;UBERON:0000200!1.68e-07!6;UBERON:0000153!1.69e-07!129;UBERON:0007811!1.69e-07!129;UBERON:0004732!1.80e-07!13;UBERON:0003056!3.99e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.51e-53;5!UBERON:0002410;2.51e-53;5!UBERON:0000010;2.87e-30;8!UBERON:0001052;9.45e-18;4!UBERON:0004907;1.71e-14;5!UBERON:0000059;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.87e-53,5;UBERON:0002410,2.87e-53,5;UBERON:0000010,3.09e-30,8;UBERON:0001052,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0000059,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66262682694747,4.63646689005732,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:57980435..57980443,- | |||
}} |
Revision as of 11:42, 20 January 2014
Short description: | p@chr16:57980435..57980443, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57980435..57980443, - |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.87e-53 | 5 |
autonomic nervous system | 2.87e-53 | 5 |
peripheral nervous system | 3.09e-30 | 8 |
rectum | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-44 | 6 |
neuroectodermal tumor | 2.38e-27 | 10 |
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |