FFCP PHASE1:Hg19::chr17:15555143..15555150,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17241 | |||
|TSSclassifier=strong | |||
|UniProt=Q59EB2 | |||
|association_with_transcript=109bp_to_uc002gor.1_5end | |||
|description=CAGE_peak_12_at_TRIM16_5end | |||
|id=chr17:15555143..15555150,- | |||
|ontology_enrichment_celltype=CL:0000066!4.15e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.99e-50;1!CL:0000650;7.14e-26;2!CL:1000500;7.14e-26;2!CL:1000618;7.14e-26;2!CL:1001318;7.14e-26;2!CL:0002173;7.14e-26;2!CL:0000669;1.13e-13;4!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:0000039;2.18e-08;7!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000586;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.42e-50,1;CL:0000650,9.18e-26,2;CL:1000500,9.18e-26,2;CL:1000618,9.18e-26,2;CL:1001318,9.18e-26,2;CL:0002173,9.18e-26,2;CL:0000669,1.29e-13,4;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0000039,2.18e-08,7;CL:0000586,2.18e-08,7;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.33e-08!14;DOID:305!2.31e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.88e-07!219;UBERON:0000344!7.08e-07!12;UBERON:0001444!7.19e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;7.14e-26;2!UBERON:0003838;7.14e-26;2!UBERON:0003586;7.14e-26;2!UBERON:0005169;7.14e-26;2!UBERON:0002321;7.14e-26;2!UBERON:0005215;7.14e-26;2!UBERON:0002303;7.14e-26;2!UBERON:0002319;7.14e-26;2!UBERON:0003891;1.13e-13;4!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0000473;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.18e-26,2;UBERON:0003838,9.18e-26,2;UBERON:0003586,9.18e-26,2;UBERON:0005169,9.18e-26,2;UBERON:0002321,9.18e-26,2;UBERON:0005215,9.18e-26,2;UBERON:0002303,9.18e-26,2;UBERON:0002319,9.18e-26,2;UBERON:0003891,1.29e-13,4;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0000473,1.69e-07,8;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.71181185733329,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963528450622197,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0,0,0,0,2.65898574505602,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0.389720617678777,0.398594520940089,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.45178432815584,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0.713921808193872,1.06886962106224,0.735159196278759,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@TRIM16 | |||
}} |
Revision as of 14:02, 20 January 2014
Short description: | p12@TRIM16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TRIM16_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_uc002gor.1_5end |
EntrezGene: | TRIM16 |
HGNC: | 17241 |
UniProt: | Q59EB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.42e-50 | 1 |
mesangial cell | 9.18e-26 | 2 |
kidney interstitial cell | 9.18e-26 | 2 |
juxtaglomerular complex cell | 9.18e-26 | 2 |
renal interstitial pericyte | 9.18e-26 | 2 |
extraglomerular mesangial cell | 9.18e-26 | 2 |
pericyte cell | 1.29e-13 | 4 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
germ line cell | 2.18e-08 | 7 |
germ cell | 2.18e-08 | 7 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 9.18e-26 | 2 |
abdominal segment connective tissue | 9.18e-26 | 2 |
trunk connective tissue | 9.18e-26 | 2 |
interstitial tissue | 9.18e-26 | 2 |
extraglomerular mesangium | 9.18e-26 | 2 |
kidney interstitium | 9.18e-26 | 2 |
juxtaglomerular apparatus | 9.18e-26 | 2 |
mesangium | 9.18e-26 | 2 |
stroma | 1.29e-13 | 4 |
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
testis | 1.69e-07 | 8 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |