FFCP PHASE1:Hg19::chr17:40828999..40829024,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26105 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z736,C9J412 | |||
|association_with_transcript=23bp_to_ENST00000293349,ENST00000412503,NM_024927,uc002iau.2,uc002iav.2,uc002iaw.2,uc010cym.1_5end | |||
|description=CAGE_peak_1_at_PLEKHH3_5end | |||
|id=chr17:40828999..40829024,- | |||
|ontology_enrichment_celltype=CL:0000066!5.81e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.08e-13!143;DOID:305!6.54e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.43e-13,143;DOID:305,7.23e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.59e-17!365;UBERON:0000481!8.69e-13!347;UBERON:0004119!5.26e-12!169;UBERON:0000925!5.26e-12!169;UBERON:0006595!5.26e-12!169;UBERON:0002100!4.20e-10!216;UBERON:0001007!6.00e-10!155;UBERON:0001555!6.00e-10!155;UBERON:0007026!6.00e-10!155;UBERON:0005177!6.38e-10!107;UBERON:0003104!2.99e-09!238;UBERON:0009142!2.99e-09!238;UBERON:0000468!5.37e-09!659;UBERON:0000077!5.80e-09!130;UBERON:0009569!7.24e-09!113;UBERON:0004921!1.33e-08!129;UBERON:0004185!1.33e-08!129;UBERON:0003102!6.82e-08!95;UBERON:0001041!1.12e-07!98;UBERON:0001048!1.70e-07!168;UBERON:0000064!2.31e-07!219;UBERON:0000924!5.05e-07!173;UBERON:0006601!5.05e-07!173;UBERON:0000915!6.67e-07!52;UBERON:0000466!6.76e-07!126;UBERON:0005157!7.47e-07!51 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.98e-11,160;UBERON:0000925,2.98e-11,160;UBERON:0006595,2.98e-11,160;UBERON:0002100,3.36e-10,199;UBERON:0009569,3.35e-09,112;UBERON:0005177,3.98e-09,101;UBERON:0001007,6.43e-09,145;UBERON:0001555,6.43e-09,145;UBERON:0007026,6.43e-09,145;UBERON:0011216,9.52e-09,223;UBERON:0000915,9.89e-08,52;UBERON:0004921,1.56e-07,118;UBERON:0001004,4.05e-07,74;UBERON:0005157,4.54e-07,47 | |||
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| |||
|short_description=p1@PLEKHH3 | |||
}} |
Revision as of 15:29, 20 January 2014
Short description: | p1@PLEKHH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000293349, ENST00000412503, NM_024927, uc002iau.2, uc002iav.2, uc002iaw.2, uc010cym.1_5end |
EntrezGene: | PLEKHH3 |
HGNC: | 26105 |
UniProt: | Q7Z736C9J412 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.98e-11 | 160 |
endoderm | 2.98e-11 | 160 |
presumptive endoderm | 2.98e-11 | 160 |
trunk | 3.36e-10 | 199 |
subdivision of trunk | 3.35e-09 | 112 |
trunk region element | 3.98e-09 | 101 |
digestive system | 6.43e-09 | 145 |
digestive tract | 6.43e-09 | 145 |
primitive gut | 6.43e-09 | 145 |
organ system subdivision | 9.52e-09 | 223 |
thoracic segment of trunk | 9.89e-08 | 52 |
subdivision of digestive tract | 1.56e-07 | 118 |
respiratory system | 4.05e-07 | 74 |
epithelial fold | 4.54e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.43e-13 | 143 |
carcinoma | 7.23e-08 | 106 |