FFCP PHASE1:Hg19::chr19:35609361..35609378,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:35609361..35609378,+ | |||
|id=chr19:35609361..35609378,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.55e-14!254;CL:0000244!3.03e-10!4;CL:0000731!3.03e-10!4;CL:0002327!3.22e-09!4;CL:0002150!3.42e-08!3;CL:0000861!3.42e-08!3;CL:0002076!5.86e-08!43;CL:0002251!5.61e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000575;5.24e-29;2!CL:0002159;1.17e-09;14!CL:1000415;1.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,6.99e-29,2;CL:0002159,1.36e-09,14;CL:1000415,1.29e-08,2;CL:0000076,8.07e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.62e-15!106;DOID:1749!1.08e-09!14;DOID:0050687!1.33e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.63e-16;1!DOID:3149;8.63e-16;1!DOID:1749;7.48e-10;14!DOID:3451;1.50e-08;2!DOID:4159;1.50e-08;2!DOID:0060122;1.50e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.99e-16,1;DOID:3149,9.99e-16,1;DOID:1749,7.71e-10,14;DOID:3451,1.61e-08,2;DOID:4159,1.61e-08,2;DOID:0060122,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.10e-15!169;UBERON:0000925!1.10e-15!169;UBERON:0006595!1.10e-15!169;UBERON:0000365!1.04e-11!5;UBERON:0001004!6.25e-11!72;UBERON:0001737!6.77e-11!9;UBERON:0001007!1.33e-10!155;UBERON:0001555!1.33e-10!155;UBERON:0007026!1.33e-10!155;UBERON:0000065!1.04e-09!53;UBERON:0005910!1.12e-09!6;UBERON:0001557!2.91e-09!19;UBERON:0001911!3.22e-09!4;UBERON:0005333!3.22e-09!4;UBERON:0008425!3.22e-09!4;UBERON:0005311!3.22e-09!4;UBERON:0004921!1.12e-07!129;UBERON:0004185!1.12e-07!129;UBERON:0003729!1.43e-07!5;UBERON:0002110!3.59e-07!3;UBERON:0006242!3.59e-07!3;UBERON:0000077!8.70e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.06e-15;1!UBERON:0005056;2.06e-15;1!UBERON:0004176;2.06e-15;1!UBERON:0000964;4.88e-15;4!UBERON:0010409;4.88e-15;4!UBERON:0001155;2.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.38e-15,1;UBERON:0005056,2.38e-15,1;UBERON:0000964,5.63e-15,4;UBERON:0010409,5.63e-15,4;UBERON:0004348,5.63e-15,4;UBERON:0005427,5.63e-15,4;UBERON:0001155,2.44e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.878002283269004,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.358234090811393,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0.86101074534246,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,2.38966241399549,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,2.98578579323551,0.176915129006678,1.83309043480088,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,1.17590876897253,0.174118413160805,0,0,0.677294319023596,0.803982487948041,1.14961639874493,0.387956065953678,0,0.225980740780532,0,0,0,3.32437350649165,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0.235939446695481,0.917142992608395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0.431855182437243,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.653150243690884,0,0.202056159043763,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr19:35609361..35609378,+ | |||
}} |
Revision as of 22:43, 20 January 2014
Short description: | p@chr19:35609361..35609378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35609361..35609378, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 6.99e-29 | 2 |
general ecto-epithelial cell | 1.36e-09 | 14 |
epithelial cell of gall bladder | 1.29e-08 | 2 |
squamous epithelial cell | 8.07e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.38e-15 | 1 |
external female genitalia | 2.38e-15 | 1 |
cornea | 5.63e-15 | 4 |
eye surface | 5.63e-15 | 4 |
optic eminence | 5.63e-15 | 4 |
corneal primordium | 5.63e-15 | 4 |
colon | 2.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.99e-16 | 1 |
keratoacanthoma | 9.99e-16 | 1 |
squamous cell carcinoma | 7.71e-10 | 14 |
skin carcinoma | 1.61e-08 | 2 |
skin cancer | 1.61e-08 | 2 |
integumentary system cancer | 1.61e-08 | 2 |