FFCP PHASE1:Hg19::chr19:39881504..39881543,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54623 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25459 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N7H5 | |||
|association_with_transcript=135bp_to_ENST00000221265,NM_019088,uc002old.2,uc002ole.1,uc010xuv.1_5end | |||
|description=CAGE_peak_2_at_PAF1_5end | |||
|id=chr19:39881504..39881543,- | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-09!180;CL:0002319!4.63e-07!25;CL:0000133!5.64e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.27e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.63e-07,25;CL:0000133,5.64e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-18!94;UBERON:0001016!1.41e-18!94;UBERON:0005743!1.94e-17!86;UBERON:0002346!2.26e-16!90;UBERON:0001017!4.70e-16!82;UBERON:0003075!2.27e-15!86;UBERON:0007284!2.27e-15!86;UBERON:0000475!3.13e-15!365;UBERON:0000924!6.42e-15!173;UBERON:0006601!6.42e-15!173;UBERON:0000955!1.87e-14!69;UBERON:0006238!1.87e-14!69;UBERON:0000119!3.41e-14!312;UBERON:0004121!5.13e-14!169;UBERON:0000481!6.08e-14!347;UBERON:0003056!1.00e-13!61;UBERON:0000483!4.07e-13!309;UBERON:0000033!6.48e-13!123;UBERON:0000153!4.80e-12!129;UBERON:0007811!4.80e-12!129;UBERON:0002616!2.26e-11!59;UBERON:0001049!6.11e-11!57;UBERON:0005068!6.11e-11!57;UBERON:0006241!6.11e-11!57;UBERON:0007135!6.11e-11!57;UBERON:0002780!6.75e-10!41;UBERON:0001890!6.75e-10!41;UBERON:0006240!6.75e-10!41;UBERON:0001869!1.91e-09!32;UBERON:0000477!2.43e-09!286;UBERON:0001893!3.83e-09!34;UBERON:0003080!4.32e-09!42;UBERON:0002791!8.33e-09!33;UBERON:0000025!8.73e-09!194;UBERON:0002020!9.19e-09!34;UBERON:0003528!9.19e-09!34;UBERON:0000956!3.63e-08!25;UBERON:0000203!3.63e-08!25;UBERON:0000064!3.80e-07!219;UBERON:0002619!8.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.95e-09;32!UBERON:0001893;3.07e-08;34!UBERON:0002791;3.64e-08;32!UBERON:0000956;3.94e-08;25!UBERON:0000203;3.94e-08;25!UBERON:0003528;5.41e-08;34!UBERON:0002020;5.41e-08;34!UBERON:0000955;1.26e-07;68!UBERON:0002780;1.57e-07;41!UBERON:0001890;1.57e-07;41!UBERON:0001017;2.56e-07;75!UBERON:0001016;8.29e-07;83!UBERON:0002619;9.19e-07;22!UBERON:0002104;9.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.84e-18,89;UBERON:0002346,1.94e-17,86;UBERON:0010314,3.67e-17,132;UBERON:0001017,7.68e-17,81;UBERON:0003075,2.02e-16,82;UBERON:0007284,2.02e-16,82;UBERON:0000955,2.88e-15,68;UBERON:0006238,2.88e-15,68;UBERON:0004121,3.43e-15,171;UBERON:0000924,3.43e-15,171;UBERON:0006601,3.43e-15,171;UBERON:0003056,4.16e-15,61;UBERON:0000119,1.72e-14,309;UBERON:0000483,2.12e-13,306;UBERON:0010371,1.49e-12,104;UBERON:0001049,1.06e-11,56;UBERON:0005068,1.06e-11,56;UBERON:0006241,1.06e-11,56;UBERON:0007135,1.06e-11,56;UBERON:0000073,2.48e-11,53;UBERON:0002616,2.48e-11,53;UBERON:0002780,6.75e-10,41;UBERON:0001890,6.75e-10,41;UBERON:0003080,6.75e-10,41;UBERON:0006240,6.75e-10,41;UBERON:0001869,1.91e-09,32;UBERON:0001893,3.83e-09,34;UBERON:0000025,7.22e-09,192;UBERON:0003528,9.19e-09,34;UBERON:0002020,9.19e-09,34;UBERON:0002791,1.33e-08,32;UBERON:0011216,1.78e-08,223;UBERON:0000956,3.63e-08,25;UBERON:0000203,3.63e-08,25;UBERON:0002619,8.49e-07,22 | |||
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| |||
|short_description=p2@PAF1 | |||
}} |
Revision as of 23:12, 20 January 2014
Short description: | p2@PAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 135bp_to_ENST00000221265, NM_019088, uc002old.2, uc002ole.1, uc010xuv.1_5end |
EntrezGene: | PAF1 |
HGNC: | 25459 |
UniProt: | Q8N7H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.63e-07 | 25 |
neurectodermal cell | 5.64e-07 | 59 |