FFCP PHASE1:Hg19::chr19:49559550..49559576,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:49559550..49559576,+ | |||
|id=chr19:49559550..49559576,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.46e-19!254;CL:0002076!8.23e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.62e-11;3!CL:0002620;5.14e-10;23!CL:0000244;4.01e-09;4!CL:0000731;4.01e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.54e-11,3;CL:0002620,5.29e-10,23;CL:0000066,2.08e-09,253;CL:0000244,5.45e-09,4;CL:0000731,5.45e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.82e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.20e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.03e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.38e-08!95;UBERON:0002097!7.84e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.76e-14;12!UBERON:0000365;3.64e-12;5!UBERON:0001949;1.62e-11;3!UBERON:0005910;3.79e-10;6!UBERON:0010371;1.56e-07;31!UBERON:0003350;2.22e-07;8!UBERON:0002097;3.37e-07;41!UBERON:0005911;7.33e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.23e-12,5;UBERON:0001949,1.54e-11,3;UBERON:0005910,4.29e-10,6;UBERON:0002097,3.51e-09,41;UBERON:0002199,6.16e-08,46;UBERON:0002416,6.16e-08,46;UBERON:0003350,1.96e-07,8;UBERON:0003102,4.49e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0.612002073732759,0,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,1.5905718941022,0.486634870302636,0.283604451492204,1.33037638477538,1.22968699970376,0.130979075497713,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0.98667019366864,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0,14.1717812194201,0,0.423863802319124,42.9130267400695,0.721367704669072,4.89517026086695,0.18611685633159,19.7468308722281,3.21542117031955,27.0104138441203,0.184099797284599,0,53.2514388774921,13.5007811625038,0.339121184620975,1.73934767846967,2.45471508531751,1.14721838155602,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0.658501712451753,0,0.402115889646523,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,3.52762469217605,0.992425680696705,0.268675568108545,1.16253575405585,0.766765358330422,0,0,0,0,0.12624243342638,0.253991577168676,1.14596527667483,0,1.71072446022705,0.411309970813294,0,0,0.112131084345361,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0.553107505625109,0.0868836144680828,0,0,0,0,0,0.909382714338778,3.32870879020994,0,0,3.83654933220156,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.40101294060657,0.460404944679482,0,0.182091168006717,0,0.451199612907412,0.15403067420883,2.35304930753057,1.46139224653261,1.05551628892876,0,0,1.0795795805107,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.366277859273374,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.826424576804891,0.960950336825531,12.888883961953,0.50578890427775,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0.43050537267123,5.05414427002877,2.21715076768338,1.1486170010348,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0.102268682502155,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,1.1528195219403,0.718061155278177,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.247127877893006,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,2.87295381715328,0,0.343972064943233,0,0,0,0,0,0,0.411125773940253,0,0,0.195551382734803,0.881747022766871,0.213452994739353,0,0.288180834308212,0.229073192331831,0.343189995723929,0.288109595976299,0.248505071130865,0.235694034616795,0.407712618220842,0.209205692624666,0.101998217636322,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0.209818352539992,0,0,3.64638874906946,0,0,0.25426853765475,0,0,0,1.19730191562487,0,2.04465626142506,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0.138348634936231,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0.813741466409323,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0,2.04035332961045,0,0,5.19357639136313,0.308801447160972,0,0.353378291891762,0.192914038270915,0,0,0.345430341731199,0.607719912354764,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,1.86480665151949,0.11796972334774,0.366857197043358,0.115525666150338,4.95796724107317,0,0,0,2.62216589314576,0,0.261906694481422,0.163771917510097,11.3849186387125,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0,0.887023701626388,0,0,0,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0.316027223465453,0.464965701472501,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0,0,0,4.77769469488717,0,0,0,0.647428837187895,0,0,0,0,0.795803100645473,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0.892769693028288,1.76447435857846,0.240724100067505,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0.435433495793923,0,0.26940821205835,0.0717222053926763,0,1.46525883499754,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:49559550..49559576,+ | |||
}} |
Revision as of 00:25, 21 January 2014
Short description: | p@chr19:49559550..49559576, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49559550..49559576, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.54e-11 | 3 |
skin fibroblast | 5.29e-10 | 23 |
epithelial cell | 2.08e-09 | 253 |
transitional epithelial cell | 5.45e-09 | 4 |
urothelial cell | 5.45e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.23e-12 | 5 |
gingival epithelium | 1.54e-11 | 3 |
transitional epithelium | 4.29e-10 | 6 |
skin of body | 3.51e-09 | 41 |
integument | 6.16e-08 | 46 |
integumental system | 6.16e-08 | 46 |
epithelium of mucosa | 1.96e-07 | 8 |
surface structure | 4.49e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.03e-09 | 14 |