FFCP PHASE1:Hg19::chr19:52104632..52104651,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_at_chr19:52104632..52104651,+ | |||
|id=chr19:52104632..52104651,+ | |||
|ontology_enrichment_celltype=CL:0000236!8.75e-27!14;CL:0000945!3.05e-19!24;CL:0000826!3.05e-19!24;CL:0000838!1.02e-16!52;CL:0000542!2.70e-16!53;CL:0000051!2.70e-16!53;CL:0000037!1.28e-14!172;CL:0000566!1.28e-14!172;CL:0000988!3.09e-13!182;CL:0002274!4.98e-13!5;CL:0000457!4.98e-13!5;CL:0002191!4.98e-13!5;CL:0000097!4.98e-13!5;CL:0000831!4.98e-13!5;CL:0002028!4.98e-13!5;CL:0002032!7.42e-11!165;CL:0000837!7.42e-11!165;CL:0000738!2.30e-10!140;CL:0000784!4.84e-09!3;CL:0002031!4.73e-08!124;CL:0000163!4.77e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.34e-64;13!CL:0000945;5.45e-34;24!CL:0000097;1.20e-12;5!CL:0000542;4.10e-12;53!CL:0000784;2.84e-10;3!CL:0002032;3.44e-08;1!CL:0000557;3.44e-08;1!CL:0000037;5.82e-08;1!CL:0001024;5.82e-08;1!CL:0000163;3.01e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.22e-59,14;CL:0000945,5.37e-34,24;CL:0000826,5.37e-34,24;CL:0000037,1.32e-17,168;CL:0000988,1.70e-16,177;CL:0000838,1.25e-14,52;CL:0000542,2.58e-14,53;CL:0000051,2.58e-14,53;CL:0002032,2.03e-13,161;CL:0000837,2.03e-13,161;CL:0000097,1.50e-12,5;CL:0002028,1.50e-12,5;CL:0000784,2.36e-10,3;CL:0000738,5.71e-10,136;CL:0002031,1.14e-08,120;CL:0001024,6.68e-08,1;CL:0000163,3.40e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;4.10e-12;53!UBERON:0001045;3.44e-08;1!UBERON:0006298;5.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;3.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.83e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.44e-08;1!UBERON:0001154;3.44e-08;1!UBERON:0001153;3.44e-08;1!UBERON:0009854;3.44e-08;1!UBERON:0002372;5.82e-08;1!UBERON:0001736;5.82e-08;1!UBERON:0001961;5.82e-08;1!UBERON:0001744;5.82e-08;1!UBERON:0001042;5.82e-08;1!UBERON:0001735;5.82e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.57e-08,1;UBERON:0001154,4.11e-08,1;UBERON:0001153,4.11e-08,1;UBERON:0001045,4.11e-08,1;UBERON:0002372,5.82e-08,1;UBERON:0001961,5.82e-08,1;UBERON:0001744,5.82e-08,1;UBERON:0001735,5.82e-08,1;UBERON:0001736,6.24e-08,1;UBERON:0006298,6.24e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.767658796194425,0,0,0,0,0,0,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0796995569058,4.36910889009705,4.44754626931777,4.26730222566507,4.80475184443215,8.62128659931725,3.30522436392431,7.63243003628291,3.41527781465669,5.87237189370939,4.96955196562797,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,4.57595928624102,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.20121085033065,1.4512968087854,0.144119953416961,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,2.68107518185313,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63948020351398,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0.0898683511473268,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32696354660219,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,2.55493176133945,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38832686744051,0,0,0,0,0,0,0,0,0.106787412567695,0.943225830597996,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.50374268767766,0.644578879735772,0,0,0,0,0.730336388246517,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,1.41439311330634,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,1.81146414231924,0.641136984606466 | |||
|short_description=p@chr19:52104632..52104651,+ | |||
}} |
Revision as of 00:49, 21 January 2014
Short description: | p@chr19:52104632..52104651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52104632..52104651, + |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.22e-59 | 14 |
lymphocyte of B lineage | 5.37e-34 | 24 |
pro-B cell | 5.37e-34 | 24 |
hematopoietic stem cell | 1.32e-17 | 168 |
hematopoietic cell | 1.70e-16 | 177 |
lymphoid lineage restricted progenitor cell | 1.25e-14 | 52 |
lymphocyte | 2.58e-14 | 53 |
common lymphoid progenitor | 2.58e-14 | 53 |
hematopoietic oligopotent progenitor cell | 2.03e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-13 | 161 |
mast cell | 1.50e-12 | 5 |
basophil mast progenitor cell | 1.50e-12 | 5 |
plasmacytoid dendritic cell | 2.36e-10 | 3 |
leukocyte | 5.71e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.14e-08 | 120 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.68e-08 | 1 |
endocrine cell | 3.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.57e-08 | 1 |
vermiform appendix | 4.11e-08 | 1 |
caecum | 4.11e-08 | 1 |
midgut | 4.11e-08 | 1 |
tonsil | 5.82e-08 | 1 |
mucosa-associated lymphoid tissue | 5.82e-08 | 1 |
lymphoid tissue | 5.82e-08 | 1 |
tonsillar ring | 5.82e-08 | 1 |
submandibular gland | 6.24e-08 | 1 |
submandibular gland primordium | 6.24e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.83e-08 | 1 |