FFCP PHASE1:Hg19::chr19:828296..828310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C440 | |||
|description=CAGE_peak_at_chr19:828296..828310,+ | |||
|id=chr19:828296..828310,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.07e-18!112;CL:0000049!1.07e-18!112;CL:0000037!2.43e-12!172;CL:0000566!2.43e-12!172;CL:0002032!1.55e-11!165;CL:0000837!1.55e-11!165;CL:0000988!1.88e-11!182;CL:0001024!2.02e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000037;2.30e-11;1!CL:0001024;2.30e-11;1!CL:0002032;3.63e-11;1!CL:0000557;3.63e-11;1!CL:0000763;2.23e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.29e-21,108;CL:0000049,4.29e-21,108;CL:0000037,1.32e-14,168;CL:0000988,9.71e-14,177;CL:0002032,2.12e-13,161;CL:0000837,2.12e-13,161;CL:0001024,2.42e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000049;7.02e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!2.19e-48!31;DOID:1240!7.17e-38!39;DOID:2531!2.83e-28!51;DOID:0060083!2.83e-28!51;DOID:0050686!1.33e-08!137;DOID:225!1.88e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.43e-59;31!DOID:1240;3.11e-38;39!DOID:2531;5.97e-22;51!DOID:0060083;5.97e-22;51!DOID:225;2.30e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.73e-61,31;DOID:1240,3.25e-48,39;DOID:2531,2.10e-36,51;DOID:0060083,2.10e-36,51;DOID:0050686,4.11e-12,137;DOID:225,2.18e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.81e-10!3;UBERON:0004854!6.81e-10!3;UBERON:0009034!6.81e-10!3;UBERON:0002095!6.81e-10!3;UBERON:0004782!6.81e-10!3;UBERON:0003281!6.81e-10!3;UBERON:0009664!6.81e-10!3;UBERON:0002296!6.81e-10!3;UBERON:0005602!6.81e-10!3;UBERON:0001179!6.81e-10!3;UBERON:0006293!6.81e-10!3;UBERON:0004177!3.97e-09!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52320527201817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.921597462471,7.58152380906339,4.79292825969704,2.6635582281414,2.50634477090067,0,2.40882112655549,1.61439765752838,8.51692475380653,9.27464430840565,4.91585222893533,6.03925491309523,4.0043794010858,4.49392619424693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0207566602092,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73421053929493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:828296..828310,+ | |||
}} |
Revision as of 20:08, 20 January 2014
Short description: | p@chr19:828296..828310, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:828296..828310, + |
Coexpression cluster: | C440_biphenotypic_acute_immature_splenic_B_myelodysplastic_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.29e-21 | 108 |
common myeloid progenitor | 4.29e-21 | 108 |
hematopoietic stem cell | 1.32e-14 | 168 |
hematopoietic cell | 9.71e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.12e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-13 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.42e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.73e-61 | 31 |
leukemia | 3.25e-48 | 39 |
hematologic cancer | 2.10e-36 | 51 |
immune system cancer | 2.10e-36 | 51 |
organ system cancer | 4.11e-12 | 137 |
syndrome | 2.18e-11 | 1 |