FFCP PHASE1:Hg19::chr1:165394215..165394226,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10479 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000470566_5end | |||
|description=CAGE_peak_8_at_RXRG_5end | |||
|id=chr1:165394215..165394226,- | |||
|ontology_enrichment_celltype=CL:0000136!3.46e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0002521;8.96e-09;3!CL:0000136;9.35e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,8.96e-09,3;CL:0000136,7.41e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.62e-23;1!UBERON:0006965;1.48e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-38!115;UBERON:0001893!1.58e-22!34;UBERON:0002791!7.87e-21!33;UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0002780!3.08e-20!41;UBERON:0001890!3.08e-20!41;UBERON:0006240!3.08e-20!41;UBERON:0002020!6.11e-20!34;UBERON:0003528!6.11e-20!34;UBERON:0003080!1.21e-19!42;UBERON:0001869!5.33e-19!32;UBERON:0002616!1.34e-17!59;UBERON:0000955!5.08e-17!69;UBERON:0006238!5.08e-17!69;UBERON:0002619!1.19e-16!22;UBERON:0003075!1.28e-15!86;UBERON:0007284!1.28e-15!86;UBERON:0001950!1.81e-15!20;UBERON:0005743!3.06e-15!86;UBERON:0001017!8.37e-15!82;UBERON:0002346!1.25e-14!90;UBERON:0000956!2.22e-14!25;UBERON:0000203!2.22e-14!25;UBERON:0000153!1.15e-13!129;UBERON:0007811!1.15e-13!129;UBERON:0003056!1.28e-13!61;UBERON:0000073!3.44e-13!94;UBERON:0001016!3.44e-13!94;UBERON:0000033!1.63e-11!123;UBERON:0001871!2.04e-11!7;UBERON:0000200!7.19e-11!6;UBERON:0004121!9.67e-09!169;UBERON:0002771!2.13e-08!3;UBERON:0000924!2.28e-08!173;UBERON:0006601!2.28e-08!173;UBERON:0000475!3.56e-07!365;UBERON:0002420!4.21e-07!9;UBERON:0007245!4.21e-07!9;UBERON:0010009!4.21e-07!9;UBERON:0010011!4.21e-07!9;UBERON:0000454!4.21e-07!9;UBERON:0002308!4.57e-07!9;UBERON:0000125!4.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.10e-23;1!UBERON:0003831;2.10e-23;1!UBERON:0003898;2.10e-23;1!UBERON:0004830;2.10e-23;1!UBERON:0003830;2.10e-23;1!UBERON:0005175;2.10e-23;1!UBERON:0001774;2.10e-23;1!UBERON:0001103;2.10e-23;1!UBERON:0000989;2.62e-23;1!UBERON:0008811;2.62e-23;1!UBERON:0007029;4.59e-23;1!UBERON:0005090;2.07e-12;2!UBERON:0001630;2.07e-12;2!UBERON:0002190;8.96e-09;3!UBERON:0000014;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.10e-23,1;UBERON:0003831,2.10e-23,1;UBERON:0003898,2.10e-23,1;UBERON:0004830,2.10e-23,1;UBERON:0003830,2.10e-23,1;UBERON:0005175,2.10e-23,1;UBERON:0001774,2.10e-23,1;UBERON:0001103,2.10e-23,1;UBERON:0010084,2.10e-23,1;UBERON:0000989,2.62e-23,1;UBERON:0008811,2.62e-23,1;UBERON:0006258,2.62e-23,1;UBERON:0005876,2.62e-23,1;UBERON:0004874,2.62e-23,1;UBERON:0007029,5.13e-23,1;UBERON:0005090,2.07e-12,2;UBERON:0001630,2.07e-12,2;UBERON:0002190,8.96e-09,3;UBERON:0000014,9.63e-07,4 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0.631719873426831,5.48489819219661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,3.21031058919516,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0.916641696046735,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0,0.524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0.7520696820681,0.919036730290385,1.96723578425883,0,0,0.122026264901963,0.250381861413,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,1.0529445968896,0,0,0,0,0,0.135075169236789,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0.543757863814654,0.328863867814245,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.413731983447581,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.12729431655633,1.61693751166575,0.217716747896961,0.342233301085281,0.134704106029175,0,0.665320713092027,0,0,0,0,0,0,0,0,11.0700586475064,0 | |||
|short_description=p8@RXRG | |||
}} |
Revision as of 22:02, 10 January 2014
Short description: | p8@RXRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RXRG_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000470566_5end |
EntrezGene: | RXRG |
HGNC: | 10479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 8.96e-09 | 3 |
fat cell | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.10e-23 | 1 |
respiratory system muscle | 2.10e-23 | 1 |
skeletal muscle of trunk | 2.10e-23 | 1 |
respiratory system skeletal muscle | 2.10e-23 | 1 |
thoracic segment muscle | 2.10e-23 | 1 |
chest organ | 2.10e-23 | 1 |
muscle of trunk | 2.10e-23 | 1 |
diaphragm | 2.10e-23 | 1 |
future diaphragm | 2.10e-23 | 1 |
penis | 2.62e-23 | 1 |
intromittent organ | 2.62e-23 | 1 |
lateral plate mesenchyme | 2.62e-23 | 1 |
undifferentiated genital tubercle | 2.62e-23 | 1 |
somatopleure | 2.62e-23 | 1 |
surface | 5.13e-23 | 1 |
muscle structure | 2.07e-12 | 2 |
muscle organ | 2.07e-12 | 2 |
subcutaneous adipose tissue | 8.96e-09 | 3 |
zone of skin | 9.63e-07 | 4 |