FFCP PHASE1:Hg19::chr1:210406223..210406234,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56256 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25236 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NUC0 | |||
|association_with_transcript=28bp_to_NM_019605,uc001hhy.2_5end | |||
|description=CAGE_peak_6_at_SERTAD4_5end | |||
|id=chr1:210406223..210406234,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.71e-13;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.05e-08;1!UBERON:0006298;3.44e-08;1!UBERON:0008801;3.44e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!9.97e-12!143;DOID:305!2.38e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:171;2.54e-11;10!DOID:169;4.74e-11;6!DOID:3095;6.36e-11;22!DOID:2994;6.36e-11;22!DOID:3151;3.44e-08;1!DOID:3149;3.44e-08;1!DOID:5093;4.98e-08;4!DOID:1612;4.98e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.38e-11,10;DOID:169,5.84e-11,6;DOID:3095,7.24e-11,22;DOID:2994,7.24e-11,22;DOID:5093,4.42e-08,4;DOID:1612,4.42e-08,4;DOID:0050687,5.91e-08,143;DOID:3151,7.16e-08,1;DOID:3149,7.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004121!4.52e-18!169;UBERON:0000924!8.11e-18!173;UBERON:0006601!8.11e-18!173;UBERON:0000073!7.07e-16!94;UBERON:0001016!7.07e-16!94;UBERON:0000153!2.28e-14!129;UBERON:0007811!2.28e-14!129;UBERON:0000033!4.07e-14!123;UBERON:0000064!2.15e-13!219;UBERON:0001017!8.02e-13!82;UBERON:0000955!9.43e-13!69;UBERON:0006238!9.43e-13!69;UBERON:0005743!9.74e-13!86;UBERON:0001049!1.56e-11!57;UBERON:0005068!1.56e-11!57;UBERON:0006241!1.56e-11!57;UBERON:0007135!1.56e-11!57;UBERON:0001893!7.77e-11!34;UBERON:0002616!1.06e-10!59;UBERON:0002020!1.40e-10!34;UBERON:0003528!1.40e-10!34;UBERON:0002791!3.68e-10!33;UBERON:0001869!4.79e-10!32;UBERON:0003080!7.47e-10!42;UBERON:0000468!1.56e-09!659;UBERON:0002780!3.09e-09!41;UBERON:0001890!3.09e-09!41;UBERON:0006240!3.09e-09!41;UBERON:0003075!4.43e-09!86;UBERON:0007284!4.43e-09!86;UBERON:0003056!6.13e-09!61;UBERON:0002346!8.18e-09!90;UBERON:0000922!8.58e-09!612;UBERON:0007023!1.03e-08!115;UBERON:0000481!2.13e-08!347;UBERON:0000062!2.81e-08!511;UBERON:0000477!3.56e-08!286;UBERON:0000475!1.60e-07!365;UBERON:0000467!2.34e-07!625;UBERON:0002050!2.68e-07!605;UBERON:0005423!2.68e-07!605;UBERON:0000480!2.91e-07!626;UBERON:0004119!5.32e-07!169;UBERON:0000925!5.32e-07!169;UBERON:0006595!5.32e-07!169;UBERON:0000923!5.64e-07!604;UBERON:0005291!5.64e-07!604;UBERON:0006598!5.64e-07!604;UBERON:0002532!5.64e-07!604;UBERON:0001737!8.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.11e-14;2!UBERON:0000013;3.71e-13;5!UBERON:0002410;3.71e-13;5!UBERON:0001044;4.74e-11;6!UBERON:0003293;4.74e-11;6!UBERON:0003294;4.74e-11;6!UBERON:0010047;4.74e-11;6!UBERON:0003408;4.74e-11;6!UBERON:0000167;4.74e-11;6!UBERON:0002902;3.44e-08;1!UBERON:0001831;3.44e-08;1!UBERON:0001736;3.44e-08;1!UBERON:0004913;3.44e-08;1!UBERON:0003703;3.44e-08;1!UBERON:0009899;3.44e-08;1!UBERON:0001567;3.44e-08;1!UBERON:0001174;3.44e-08;1!UBERON:0004914;3.44e-08;1!UBERON:0000010;1.60e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.67e-15,2;UBERON:0000013,4.78e-13,5;UBERON:0002410,4.78e-13,5;UBERON:0001044,4.59e-11,6;UBERON:0003293,4.59e-11,6;UBERON:0003294,4.59e-11,6;UBERON:0010047,4.59e-11,6;UBERON:0000167,4.59e-11,6;UBERON:0001736,2.33e-08,1;UBERON:0006298,2.33e-08,1;UBERON:0004913,3.57e-08,1;UBERON:0003703,3.57e-08,1;UBERON:0001174,3.57e-08,1;UBERON:0004914,3.57e-08,1;UBERON:0001831,4.41e-08,1;UBERON:0001567,4.41e-08,1;UBERON:0008801,4.41e-08,1;UBERON:0002902,5.07e-08,1;UBERON:0009899,5.07e-08,1;UBERON:0000010,1.83e-07,8;UBERON:0003408,8.04e-07,10 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0.272746120590835,0,0,0.265059536642971,0.348581828608555,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0.828147600278907,1.01150814046861,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,1.32845119707087,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0.902399225814824,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0.366277859273374,0.495056999523528,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,2.45695363593188,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0.211125408127993,0.597743964753209,0,0,1.02268682502155,0,0,0.539210106883961,0.358042349351218,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,1.30213880542617,3.84823999983261,0.724999575434793,0.227586896570999,1.5255219017566,0.236387681767936,1.03423011972439,0,0.347249989866585,1.77148277162768,0.241192877250816,0,0.221158519862449,0,0,0,0.139423744278603,0.538651809526579,0.227884111694002,0.23056390438806,2.87224462111271,0.217294743844016,0.638002319463839,1.83195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0,0,0.404406797884062,0,0.468528891450678,0,0.586993856796269,0,0,0,0.30607276163049,0.252746318513952,0.450970258243478,0.414752765588989,0,0,0,0,0,0,0,0.489961987071888,0.261177619741208,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0.391102765469606,0.160317640503067,0,0.39961921916426,0,0.114536596165916,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0.275078873194468,0,0,0,0.121499113316049,1.0063040627978,0.157611414598396,0.262272940674991,0,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0,0.339936274560377,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0.414239055347196,0,0,4.87170393523584,0,0,0.5013797880454,0,0,0,0,0.244052529803926,0.1251909307065,0,0.443716206147409,0.496771223531068,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,1.01444720027578,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,0,0.567515953566836,0,0,0,1.15104934173287,0.862598491173454,0.786329709279482,2.07498312564826,0,0,0,1.11728983594649,0.318004350653419,0,0,0.352675943690684,0,0.513833800771676,0,0.159633859057151,0.41023272848151,0,1.03735878696327,0,0,0,0.11796972334774,0.366857197043358,0.924205329202706,0,0,0,0.0752103283492573,0.20170506870352,0,0.523813388962845,0.49131575253029,1.18284868973636,0.675375846183947,0.781078098613847,0.620060389503552,0.570742291745161,0,1.09651553371436,0,1.05522746615772,2.29972369751271,0,0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| |||
|short_description=p6@SERTAD4 | |||
}} |
Revision as of 00:02, 11 January 2014
Short description: | p6@SERTAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERTAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_NM_019605, uc001hhy.2_5end |
EntrezGene: | SERTAD4 |
HGNC: | 25236 |
UniProt: | Q9NUC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.67e-15 | 2 |
sympathetic nervous system | 4.78e-13 | 5 |
autonomic nervous system | 4.78e-13 | 5 |
saliva-secreting gland | 4.59e-11 | 6 |
gland of oral region | 4.59e-11 | 6 |
gland of foregut | 4.59e-11 | 6 |
oral gland | 4.59e-11 | 6 |
oral cavity | 4.59e-11 | 6 |
submandibular gland | 2.33e-08 | 1 |
submandibular gland primordium | 2.33e-08 | 1 |
hepatopancreatic ampulla | 3.57e-08 | 1 |
extrahepatic bile duct | 3.57e-08 | 1 |
common bile duct | 3.57e-08 | 1 |
duodenal papilla | 3.57e-08 | 1 |
parotid gland | 4.41e-08 | 1 |
cheek | 4.41e-08 | 1 |
parotid gland primordium | 4.41e-08 | 1 |
occipital pole | 5.07e-08 | 1 |
pole of cerebral hemisphere | 5.07e-08 | 1 |
peripheral nervous system | 1.83e-07 | 8 |
gland of gut | 8.04e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.38e-11 | 10 |
neuroendocrine tumor | 5.84e-11 | 6 |
germ cell and embryonal cancer | 7.24e-11 | 22 |
germ cell cancer | 7.24e-11 | 22 |
thoracic cancer | 4.42e-08 | 4 |
breast cancer | 4.42e-08 | 4 |
cell type cancer | 5.91e-08 | 143 |
skin squamous cell carcinoma | 7.16e-08 | 1 |
keratoacanthoma | 7.16e-08 | 1 |