FFCP PHASE1:Hg19::chr1:214776570..214776593,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1857 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000366955,ENST00000464322_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_CENPF_5end | |||
|id=chr1:214776570..214776593,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.46e-10!254;CL:0002319!1.19e-09!25;CL:0000548!4.96e-09!679;CL:0000004!4.96e-09!679;CL:0000255!4.96e-09!679;CL:0000012!7.55e-09!682;CL:0000133!1.04e-08!59;CL:0000095!8.09e-08!17;CL:0000123!8.09e-08!17;CL:0000333!1.81e-07!41;CL:0000243!9.27e-07!15;CL:0000125!9.27e-07!15;CL:0000030!9.27e-07!15;CL:0000339!9.27e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.83e-10;25!CL:0000095;8.29e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.25e-10,253;CL:0002319,1.09e-09,25;CL:0000133,6.58e-09,59;CL:0000095,8.63e-08,17;CL:0000123,8.63e-08,17;CL:0000333,1.17e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.00e-61!235;DOID:14566!3.44e-61!239;DOID:0050687!2.77e-33!143;DOID:0050686!1.43e-27!137;DOID:305!3.00e-22!106;DOID:2531!1.45e-16!51;DOID:0060083!1.45e-16!51;DOID:1240!1.94e-13!39;DOID:8692!6.58e-10!31;DOID:3095!1.06e-09!22;DOID:2994!1.06e-09!22;DOID:1115!4.86e-07!20;DOID:7!8.38e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.67e-11;39!DOID:2531;9.67e-11;51!DOID:0060083;9.67e-11;51!DOID:3095;5.60e-10;22!DOID:2994;5.60e-10;22!DOID:8692;6.67e-10;31!DOID:0050687;2.71e-08;143!DOID:14566;1.11e-07;239!DOID:162;3.04e-07;235!DOID:0050686;3.73e-07;137!DOID:305;4.75e-07;106!DOID:1115;6.09e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.66e-62,235;DOID:14566,4.10e-62,239;DOID:0050687,2.60e-33,143;DOID:0050686,1.03e-27,137;DOID:305,2.90e-22,106;DOID:2531,4.87e-17,51;DOID:0060083,4.87e-17,51;DOID:1240,8.19e-14,39;DOID:8692,3.58e-10,31;DOID:3095,5.84e-10,22;DOID:2994,5.84e-10,22;DOID:7,5.54e-07,39;DOID:1115,6.38e-07,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,3.9319446983431,1.31883489114227,2.22779435328084,0,1.34465029290355,1.80808358407193,0,0,5.41732655537867,1.42800483870977,0.626909442956176,61.5407372331772,41.6098252221568,40.5502725891213,26.2862115772952,25.3690821400332,31.7204448694127,2.36018566109342,3.45446458287491,0.619264493264304,0.919421224478927,0.90361775633475,0.369754010166788,50.7410163800976,18.6241694558522,8.22081230137572,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0.575384784644301,0,0,0,0.645484683583826,0,0.941211697713023,0,0,0.306083892370903,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.59675003159727,0.730656615058536,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,1.12101712596307,12.3790519844286,1.37696839079683,1.57204305099666,1.43921049299656,1.83905144929746,0,0.946895611469467,0,9.46988883523975,0.883817722424512,1.32920336750173,2.97884250141517,6.91693126518646,4.55207716459574,11.3462154176537,10.7776506936481,22.6046406873341,0.741432815810302,1.33770414044857,2.09071047609954,20.2823723428643,2.68254345521345,3.4362744548263,1.51811815211702,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,1.64225599384209,2.82249440514625,2.67440195783507,2.60683926989038,0,2.68280343881454,5.75381528295886,27.469375581227,2.00535164254356,2.89693037921647,7.15757352345989,0.973269740605272,48.4963612051668,11.9733874629785,13.3508874253552,1.0478326039817,1.09288586487763,3.33705998505986,0,0,0.132957960518865,0.238490624305342,0,0,2.78267370313387,0,1.38856200643038,2.26123176769604,1.25849830862972,5.77747888074142,3.34391946458897,4.13466814670926,3.91342888955381,3.01248551488203,1.61131726843659,1.52054421143703,0.732186172644509,5.14728312484216,0,29.5582100620304,20.6567022816076,26.0132519916474,1.53316637465883,1.89853131913626,5.86245580577303,1.31780417436063,0,0.872188104285069,0.993943903390637,14.6891393530913,0,12.0471380714502,10.9947198481491,2.24271040056923,2.1349799145941,1.2333377420858,12.7596524513904,4.84958419450877,11.6057951210556,1.36221684880438,0.576175924479999,5.85803579584492,1.5608003841516,3.99330275081114,1.94283284717341,20.4336027640151,13.2735814381868,18.8204080981013,11.6367877615289,15.9684612505298,6.19954687054593,7.12801714369232,2.71993622206413,0.910161361938026,0.718618141816238,26.2604337768343,31.9052225673509,24.9357703935765,14.4862614890677,7.96868269077451,5.10809400282429,8.50741373700158,50.9466565356368,3.84403299873421,3.81477422087211,23.4071054945834,11.747988333182,8.50213782150576,3.16398655763703,73.4177045249508,16.4668538722426,23.9812085531909,4.05019554026117,2.26304479546337,22.3656043285467,19.042146565024,8.30846902321389,1.35282597214308,4.63668405004419,4.87567812161307,18.4180296255689,19.2168164066154,14.6404368015593,14.4088866471365,16.9054970086671,24.4534830580806,0,3.85944562915731,1.38134921352481,0,0,23.1881328078094,22.7589331605437,27.7162684366004,22.6102644101408,19.827029412409,19.693461386221,21.1685153811458,20.995696768412,23.8543237306762,0.738155454624648,0,0,0,0,0,0.590789906681404,11.0365774853663,22.8758495690191,11.3234754797027,2.08525542276389,1.1240175325762,7.23808601363742,7.68484094815796,5.2129328849652,0,12.9898207822746,19.592238440788,1.76113041353732,1.73239737313289,1.85194205030644,4.37584550139576,0,0.858486162094873,1.23108503043699,1.17002132569619,4.45893486866185,0.93733833986777,4.19955320497149,2.1266264586358,13.3442198827244,20.9256435730053,4.98397482914775,17.735876564254,9.68532774145486,1.24396869324463,0.288239906833923,0.37872730027914,24.8911745625303,6.875791660049,3.51652341630141,3.4214489204541,10.796886733849,24.3277876853573,9.1464458441785,5.38229204857731,1.30788020649984,15.8410697373252,0.258543431515556,0,9.298330278116,2.92531928243358,4.16029747645464,4.62973273671856,2.83698264046557,2.93064396917709,2.7165818795048,0,1.64648067356154,9.12061316022458,1.77695974371273,3.16780749173372,0.301439377059586,0,1.69954085009497,0,0,0,2.87549826589899,0,47.0701786634371,8.54209709338717,9.04095819221687,23.2779252211864,30.4871591662394,3.34952292343276,2.58753089831421,1.54011643535698,48.0238839780456,36.4391590801341,6.18631050222156,8.04078073604874,14.0346525363696,0,0,0.414415513436035,0.736148950314839,0,0.813795071099207,1.66376689224646,7.49401752948079,2.52323864054295,5.50564650465752,0,0,1.03473071292505,37.1966335179844,1.84369168541703,15.8997014476592,0,0.343143423810856,1.24060815673732,0.215714200818617,0.213455115606889,2.72814814301633,8.32177197552485,3.93107381328584,0.496215615637554,4.910783145218,0.561320188866147,0.512556597022804,2.55853624533352,0,1.48418066444991,7.40206530252747,3.55123450626254,20.5317890034523,5.19254429183621,7.20504346451747,15.349150098136,0.601519410909855,0,10.1036714384854,11.4717435844232,0.262248829918848,2.25599806453706,8.62571775569445,3.13739907670742,1.46139224653261,6.75530424914404,2.27466768141793,1.02056223165909,13.8186186305369,1.54227252690289,3.25135725052623,0,3.05851527654046,0.831076008928724,0.671624264166535,142.957439573149,90.9795369566654,16.1563578823325,1.64007322849853,6.18218949862176,1.54561517471583,42.7629400701664,65.7600714367086,1.14853107599234,0.650060246036521,14.4615536859744,3.86682873168488,9.55101426110795,10.7452572308291,13.507984103484,22.1285704428644,13.0515024522806,12.5283142301668,5.69805028139119,0.165284915360978,1.72971060628596,22.2046119740576,0,0,2.51849877464512,1.3940745403212,0.924100740528266,0.532306030317022,2.60979897622522,0.74129687641568,0.572499546967965,8.55964249527235,16.135350660655,1.71567174531442,1.02359116524534,0.855877976067841,1.59101623962968,1.56989728039846,7.91438813366585,7.41249980287348,8.24686816419805,0.808729926293264,0,0.842516912477962,2.43816869544795,0.487426979262569,0,9.96449353278296,0.989838023675989,2.26016233240486,7.71911480964574,0,0,0.578775534266688,3.27947376023316,0.811641507850816,3.0982349809975,1.40847801266121,24.3799298746888,1.8667317792493,0,17.3832921394593,0.422215270595328,0,1.89736586882858,6.29882496440969,4.04132873447151,0.670302275535787,2.17781969722645,0.941438007767792,0.86101074534246,1.68471475667626,0,0.918893600827838,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0,27.6674344220155,5.77487913158015,38.471313909022,84.540444682202,36.2115724570877,82.453396440812,38.4217317276462,25.1470008005349,10.1497846170154,18.6272752797017,15.5818531331787,11.7934814807653,11.868203309726,19.4283070758549,7.51903431270201,11.511840890509,31.6358507954288,19.7763713047227,11.4978484176388,15.1142351692536,23.9647796160597,36.9065578022486,42.3796819948248,29.112826214904,37.5848334758577,25.8483537790196,20.2841758856987,34.3064127037755,53.5750619333828,19.4626162024549,0.586032717087576,18.5681598276756,39.1166278813949,48.3031449570902,0.23874448473769,16.6300221266278,0.307160702099232,0,0,2.00355669041231,16.1507796742224,50.0367217263344,0,8.84108529699673,7.55798243562828,61.1566721362886,19.8166536792322,1.55519793830904,51.9439069631549,8.95105873378046,26.0901908815705,0.295930216910801,0,42.232056254962,0,0.185536196323703,0,11.9796770099207,31.747979998619,0.724999575434793,13.427626897689,13.7296971158094,11.8193840883968,39.300744549527,23.0367644572771,44.4479987029228,0,0,0,0,0,0,17.5390926265574,11.5721707751241,0.769502585037971,5.69710279235006,19.3673679685971,42.3656081614124,12.3858003991089,1.91400695839152,7.23620987874712,0.533034776018635,22.482525603062,24.8028805104139,21.27509528322,11.5053786914762,16.4692528826901,11.2440463273815,29.0323211068003,45.9326713253294,17.9348354848823,31.0142335502381,29.8254980725615,60.8052077675276,2.98578579323551,3.62676014463691,7.33236173920351,14.5295353053505,16.3104399409384,14.0969631832365,0,3.21031058919516,0,51.2697957696021,19.3707972742769,15.2951639106478,0,4.83962864194656,7.65181904076225,4.48624715362264,54.8680480862898,35.8761142234475,10.634461963315,2.97892760287949,6.27865836814451,7.16834578637753,10.2459436570725,14.5608406663796,5.38035188838906,49.0941911046032,41.1790047125304,1.22308667769421,41.6206198581312,23.9955701596931,22.7307776138037,18.6402087510785,4.65547279144413,8.82561266915003,1.35588444468319,15.0746117111426,22.0573218990319,0.126621591911757,43.0213042016567,13.6269994427607,0.213452994739353,20.3805801773773,4.32271251462318,34.017369061277,31.9166696023254,0.864328787928898,5.3428590293136,5.42096279618629,44.712483798219,44.1424011438046,45.4912050657995,40.7420331761142,0,0,15.3295905680367,15.9013213325384,14.7216918396416,0.837847203816763,0.229160424011684,0.717873024576814,5.39133301347276,0,0,10.6821721253895,1.08089965062721,128.145544480199,17.5686496545109,19.6973901530988,23.3890297174022,8.46476341026839,37.340939441011,0,0.136203406111576,18.0043526280821,24.6195591509049,22.0183379155468,4.94942561413301,0.77380195455795,0,9.05673656518018,0.315222829196793,1.46872846777995,1.5840050477911,2.68931008999267,27.8277036113196,0,0,25.426853765475,1.62899880526114,0,3.5924609612035,41.9055670468706,13.7094509651396,7.32668493677313,18.1299346432201,0.293104467356165,0,0.387848869084652,0.13223260174269,17.2797706263173,40.1744562720503,2.0289608387862,2.82967749179399,0.414239055347196,1.9846640872478,19.9587748216924,20.4611565279905,42.7688642706022,0,0,0,0,26.3850881700394,0,0,0.3755727921195,0,0.332787154610557,0.18628920882415,67.7908311187531,54.7414186874027,23.0506658663305,8.56396000634902,2.35265819698172,42.1501415226193,48.113781498794,6.11944691836184,5.37540612648616,4.43844689202091,3.03044808440143,1.25783950876288,0.889811221596536,0,0.604923695052956,6.99467402622512,8.57559869939877,5.25679331640218,0.449803112163605,6.52104418880289,6.63529932545369,1.86089200190596,0,2.25386413495828,1.14241563650639,19.5297951938238,6.7284003904947,2.36303225493475,1.85613503951397,2.78667122089031,38.4026654076627,4.12074846219351,2.35724642136143,6.30924491143255,2.88929745610955,28.5207316528651,9.91778309467804,19.95012144508,15.280483305373,11.7473618163104,24.1769935460008,7.72003617902431,13.8148951234585,18.9057386162093,7.90947556910751,19.0904957937972,38.1799862696041,18.6532384534847,6.68491903590241,0.138258436151731,0,0.132864840313363,0.327130788511688,8.84546591885314,8.8478247151339,23.8782699395249,4.59971010466339,48.2246618217517,6.37195424745018,108.395547131266,24.301985433243,0.139879507719444,1.86623178009892,94.002362908184,98.8753520507572,18.5573811389958,56.2429636688872,25.1204144331957,46.7664824223702,14.3765486540443,34.0773399963679,10.1761392209094,134.380413482136,38.4273959177025,5.29013915536026,3.062454773532,0.0642292250964595,0,0.319267718114302,0,3.02486035466062,0,0.484426936895553,0,11.581430783121,16.8696704387269,15.5914308743427,7.04706563517063,21.7387794416285,49.0155547502671,22.2786168770228,0.300841313397029,20.3722119390555,0,12.8334280295897,20.4714896887621,25.2833907431147,0,0,0,0,18.0501686976012,0,0.496211178389294,29.3704978080566,5.23825953322341,0,1.3451348888753,0,0,2.7497734750418,12.9062066062473,50.7604507934759,0.40781839786099,0.0657727735628491,21.2748913591143,30.588635520319,0.156986185701028,0,25.7850390248686,10.0447459256045,23.7520350340484,6.6885236304187,0.0714765441766563,89.9097450759214,32.0826334016026,93.7096087710903,4.81026818838152,2.07216164163037,1.7071847709395,0,0,20.9447641293101,20.536430546957,0,5.26945797651315,0.31020638566432,1.91107787795487,5.36906072629403,36.7081873721009,14.5082330728901,0,0,2.3196288626764,9.71421986118279,26.66909883468,58.2925771222809,8.08656617287466,53.762335050545,33.2020360571196,30.1925687133347,2.77826969188601,5.02686989159102,1.88126918544609,0.245148321753905,4.71353094203252,0,0.594092800654172,2.5359343655004,7.98657439032739,1.69171052363736,3.0939786227317,26.0846416964065,11.7845599479734,4.58763333230399,1.20362050033752,2.92134555298607,0.458729283404541,0.286679166302903,54.1156458322623,0,6.10890966476528,4.7612415646386,2.97596014533401,0.462175628631418,2.59575937274273,25.3594513918509,26.2237372712869,48.1454303843461,31.7185260497563,34.2038278739917,54.8612550223024,40.8653289046571,2.80381183407486,2.41167717140561,0,0.103432995861895,2.77204176471275,6.42773964952099,37.5261566147195,26.7542018615148,21.8657132032196,0,2.02117188958219,3.48346796635138,2.05339980651169,2.6940821205835,2.15166616178029,2.99394320891412,45.9928467652006,21.3454691755431,38.614456457388,0.808426818959282,2.34640942403454,0.611207220914332,14.6482624193666,0,3.01910690386539,5.12909587685173 | |||
|short_description=p2@CENPF | |||
}} |
Revision as of 00:10, 11 January 2014
Short description: | p2@CENPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CENPF_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 32bp_to_ENST00000366955, ENST00000464322_5end |
EntrezGene: | CENPF |
HGNC: | 1857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.25e-10 | 253 |
neural cell | 1.09e-09 | 25 |
neurectodermal cell | 6.58e-09 | 59 |
neuron associated cell | 8.63e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 8.63e-08 | 17 |
migratory neural crest cell | 1.17e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.66e-62 | 235 |
disease of cellular proliferation | 4.10e-62 | 239 |
cell type cancer | 2.60e-33 | 143 |
organ system cancer | 1.03e-27 | 137 |
carcinoma | 2.90e-22 | 106 |
hematologic cancer | 4.87e-17 | 51 |
immune system cancer | 4.87e-17 | 51 |
leukemia | 8.19e-14 | 39 |
myeloid leukemia | 3.58e-10 | 31 |
germ cell and embryonal cancer | 5.84e-10 | 22 |
germ cell cancer | 5.84e-10 | 22 |
disease of anatomical entity | 5.54e-07 | 39 |
sarcoma | 6.38e-07 | 20 |