FFCP PHASE1:Hg19::chr20:43108553..43108569,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16114 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_uc010ggr.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_TTPAL_5end | |||
|id=chr20:43108553..43108569,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.54e-12,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.11e-09!26;UBERON:0002107!1.91e-07!19;UBERON:0006925!1.91e-07!19;UBERON:0008836!1.91e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.16e-16;19!UBERON:0006925;2.16e-16;19!UBERON:0002423;1.18e-12;25!UBERON:0002365;1.13e-10;31!UBERON:0002330;1.13e-10;31!UBERON:0002368;3.09e-08;33!UBERON:0000949;3.59e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.16e-16,19;UBERON:0006925,2.16e-16,19;UBERON:0008836,2.16e-16,19;UBERON:0008835,2.85e-14,22;UBERON:0003894,2.85e-14,22;UBERON:0009854,1.10e-13,23;UBERON:0007499,1.18e-12,25;UBERON:0009497,1.18e-12,25;UBERON:0000015,1.18e-12,25;UBERON:0002423,1.18e-12,25;UBERON:0006235,1.18e-12,25;UBERON:0004161,1.18e-12,25;UBERON:0009856,3.38e-12,26;UBERON:0002365,2.36e-10,31;UBERON:0002330,2.36e-10,31;UBERON:0002368,2.97e-09,35;UBERON:0000949,2.38e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.3073160180422,0,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8683157937492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2868775343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TTPAL | |||
}} |
Revision as of 11:20, 21 January 2014
Short description: | p3@TTPAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTPAL_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -39bp_to_uc010ggr.1_5end |
EntrezGene: | TTPAL |
HGNC: | 16114 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.54e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.16e-16 | 19 |
digestive gland | 2.16e-16 | 19 |
liver bud | 2.16e-16 | 19 |
hepatic diverticulum | 2.85e-14 | 22 |
liver primordium | 2.85e-14 | 22 |
digestive tract diverticulum | 1.10e-13 | 23 |
epithelial sac | 1.18e-12 | 25 |
epithelium of foregut-midgut junction | 1.18e-12 | 25 |
anatomical boundary | 1.18e-12 | 25 |
hepatobiliary system | 1.18e-12 | 25 |
foregut-midgut junction | 1.18e-12 | 25 |
septum transversum | 1.18e-12 | 25 |
sac | 3.38e-12 | 26 |
exocrine gland | 2.36e-10 | 31 |
exocrine system | 2.36e-10 | 31 |
endocrine gland | 2.97e-09 | 35 |
endocrine system | 2.38e-07 | 45 |