FFCP PHASE1:Hg19::chr20:51453401..51453404,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_at_chr20:51453401..51453404,- | |||
|id=chr20:51453401..51453404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.45e-40;5!CL:0002321;2.85e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.42e-50;1!UBERON:0007297;5.56e-26;2 | |||
|ontology_enrichment_disease=DOID:169!6.81e-21!6;DOID:171!8.56e-13!10;DOID:3193!5.02e-08!2;DOID:962!5.02e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:169;7.68e-34;6!DOID:171;8.12e-21;10!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.35e-34,6;DOID:171,8.54e-21,10;DOID:3095,4.53e-10,22;DOID:2994,4.53e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!6.28e-25!5;UBERON:0002410!6.28e-25!5;UBERON:0006947!4.22e-19!3;UBERON:0004054!4.22e-19!3;UBERON:0000998!5.42e-15!1;UBERON:0006868!5.42e-15!1;UBERON:0001000!6.22e-15!1;UBERON:0005352!6.22e-15!1;UBERON:0005904!1.41e-14!4;UBERON:0000010!3.79e-14!8;UBERON:0003714!5.02e-08!2;UBERON:0001905!5.37e-08!2;UBERON:0002757!5.37e-08!2;UBERON:0010134!5.37e-08!2;UBERON:0002784!5.37e-08!2;UBERON:0005408!5.37e-08!2;UBERON:0001899!5.37e-08!2;UBERON:0000341!5.74e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.96e-66;3!UBERON:0004054;3.96e-66;3!UBERON:0000998;2.42e-50;1!UBERON:0006868;2.42e-50;1!UBERON:0001000;5.12e-50;1!UBERON:0005352;5.12e-50;1!UBERON:0005904;5.82e-50;4!UBERON:0000013;2.45e-40;5!UBERON:0002410;2.45e-40;5!UBERON:0000010;5.43e-23;8!UBERON:0000058;8.98e-21;10!UBERON:0003135;5.38e-19;11!UBERON:0004175;1.73e-10;21!UBERON:0003101;4.64e-10;22!UBERON:0000079;4.64e-10;22!UBERON:0000473;1.59e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.35e-66,3;UBERON:0004054,3.35e-66,3;UBERON:0000998,2.42e-50,1;UBERON:0006868,2.42e-50,1;UBERON:0001000,3.99e-50,1;UBERON:0005352,3.99e-50,1;UBERON:0005904,5.14e-50,4;UBERON:0000013,2.71e-40,5;UBERON:0002410,2.71e-40,5;UBERON:0000010,5.74e-23,8;UBERON:0003135,5.14e-19,11;UBERON:0000058,1.72e-11,19;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0004175,5.49e-09,25;UBERON:0000473,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9746768937989,1.40172254815686,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:51453401..51453404,- | |||
}} |
Revision as of 12:14, 21 January 2014
Short description: | p@chr20:51453401..51453404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:51453401..51453404, - |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.35e-66 | 3 |
internal male genitalia | 3.35e-66 | 3 |
seminal vesicle | 2.42e-50 | 1 |
seminal fluid secreting gland | 2.42e-50 | 1 |
vas deferens | 3.99e-50 | 1 |
spermatic cord | 3.99e-50 | 1 |
duct of male reproductive system | 5.14e-50 | 4 |
sympathetic nervous system | 2.71e-40 | 5 |
autonomic nervous system | 2.71e-40 | 5 |
peripheral nervous system | 5.74e-23 | 8 |
male reproductive organ | 5.14e-19 | 11 |
duct | 1.72e-11 | 19 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
internal genitalia | 5.49e-09 | 25 |
testis | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.35e-34 | 6 |
neuroectodermal tumor | 8.54e-21 | 10 |
germ cell and embryonal cancer | 4.53e-10 | 22 |
germ cell cancer | 4.53e-10 | 22 |