FFCP PHASE1:Hg19::chr20:62667528..62667542,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27655 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=38bp_to_uc010gko.2_5end | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_1_at_LINC00176_5end | |||
|id=chr20:62667528..62667542,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.38e-13!24;CL:0000071!2.24e-11!18;CL:0002546!2.24e-11!18;CL:0000115!8.23e-09!35;CL:0002322!2.41e-08!5;CL:1000413!2.92e-08!9;CL:0000080!2.01e-07!6;CL:0002543!3.09e-07!6;CL:0002618!9.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.25e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.25e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.64e-29;11!UBERON:0009497;4.69e-25;13!UBERON:0006965;3.70e-11;2!UBERON:0001041;4.23e-11;30!UBERON:0003104;1.17e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.31e-21;1!DOID:1357;6.31e-21;1!DOID:7;4.05e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.31e-21,1;DOID:1357,6.31e-21,1;DOID:7,1.30e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.24e-11!18;UBERON:0004638!2.24e-11!18;UBERON:0004852!2.24e-11!18;UBERON:0002370!6.86e-11!4;UBERON:0005058!6.86e-11!4;UBERON:0009113!6.86e-11!4;UBERON:0003295!6.86e-11!4;UBERON:0005562!6.86e-11!4;UBERON:0004177!2.49e-10!7;UBERON:0005057!4.12e-10!26;UBERON:0000487!3.95e-09!22;UBERON:0003915!2.92e-08!9;UBERON:0004700!2.92e-08!9;UBERON:0001917!2.92e-08!9;UBERON:0001638!3.34e-08!9;UBERON:0003920!3.34e-08!9;UBERON:0004582!3.34e-08!9;UBERON:0006914!6.44e-08!25;UBERON:0003351!2.14e-07!6;UBERON:0002368!3.08e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.01e-40;2!UBERON:0005058;3.01e-40;2!UBERON:0009113;3.01e-40;2!UBERON:0001764;6.31e-21;1!UBERON:0001825;6.31e-21;1!UBERON:0002368;2.44e-18;33!UBERON:0002107;2.69e-17;19!UBERON:0006925;2.69e-17;19!UBERON:0004177;8.82e-17;5!UBERON:0005057;8.82e-17;5!UBERON:0000949;7.08e-14;43!UBERON:0002423;3.03e-13;25!UBERON:0002365;3.27e-10;31!UBERON:0002330;3.27e-10;31!UBERON:0002530;2.53e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.31e-21,1;UBERON:0001825,6.31e-21,1;UBERON:0002370,9.46e-21,4;UBERON:0005058,9.46e-21,4;UBERON:0009113,9.46e-21,4;UBERON:0003295,9.46e-21,4;UBERON:0005562,9.46e-21,4;UBERON:0002368,1.77e-20,35;UBERON:0002107,2.69e-17,19;UBERON:0006925,2.69e-17,19;UBERON:0008836,2.69e-17,19;UBERON:0000949,6.24e-16,45;UBERON:0008835,5.37e-15,22;UBERON:0003894,5.37e-15,22;UBERON:0009854,2.31e-14,23;UBERON:0003351,3.48e-14,6;UBERON:0003929,2.86e-13,54;UBERON:0007499,3.03e-13,25;UBERON:0009497,3.03e-13,25;UBERON:0000015,3.03e-13,25;UBERON:0002423,3.03e-13,25;UBERON:0006235,3.03e-13,25;UBERON:0004161,3.03e-13,25;UBERON:0009856,9.45e-13,26;UBERON:0004177,2.66e-12,7;UBERON:0005057,2.66e-12,7;UBERON:0002530,3.85e-12,59;UBERON:0002365,9.40e-11,31;UBERON:0002330,9.40e-11,31;UBERON:0000974,6.80e-09,10;UBERON:0003408,6.80e-09,10;UBERON:0001042,6.80e-09,10;UBERON:0009145,6.80e-09,10;UBERON:0005911,1.05e-08,82;UBERON:0001041,3.40e-08,87;UBERON:0006562,3.63e-08,11;UBERON:0009722,3.63e-08,11;UBERON:0007690,3.63e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,1.04421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.8975697164723,49.4758384889365,48.2956930113635,46.4410417155334,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0.101988829741982,0,0,0,0,0,0,0,0,0,3.03567876229229,1.73809200028402,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |||
|short_description=p1@LINC00176 | |||
}} |
Revision as of 12:53, 21 January 2014
Short description: | p1@LINC00176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00176_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 38bp_to_uc010gko.2_5end |
EntrezGene: | LINC00176 |
HGNC: | 27655 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.25e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.31e-21 | 1 |
maxillary sinus cancer | 6.31e-21 | 1 |
disease of anatomical entity | 1.30e-08 | 39 |